RNA–Protein interactions for RNA: ENST00000546155.5

LTBP4-206, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,285 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-206ENST00000546155 PRG4Q92954 1404 aaPredicted RBP34.08■■■■□ 3.05
LTBP4-206ENST00000546155 SHROOM2Q13796 1616 aa34.03■■■■□ 3.04
LTBP4-206ENST00000546155 KIAA0586Q9BVV6 1533 aa33.99■■■■□ 3.03
LTBP4-206ENST00000546155 TRHP20396 242 aaPredicted RBP33.98■■■■□ 3.03
LTBP4-206ENST00000546155 RAPGEF2Q9Y4G8 1499 aa33.91■■■■□ 3.02
LTBP4-206ENST00000546155 TTBK1Q5TCY1 1321 aaPredicted RBP33.83■■■■□ 3.01
LTBP4-206ENST00000546155 CHIC1Q5VXU3 224 aa33.76■■■□□ 2.99
LTBP4-206ENST00000546155 FAM9AQ8IZU1 332 aaPredicted RBP33.76■■■□□ 2.99
LTBP4-206ENST00000546155 CSRNP3Q8WYN3 585 aa33.74■■■□□ 2.99
LTBP4-206ENST00000546155 IQGAP2Q13576 1575 aa33.72■■■□□ 2.99
LTBP4-206ENST00000546155 PRXQ9BXM0 1461 aa33.69■■■□□ 2.98
LTBP4-206ENST00000546155 CARMIL2Q6F5E8 1435 aa33.67■■■□□ 2.98
LTBP4-206ENST00000546155 PTPRGP23470 1445 aa33.64■■■□□ 2.98
LTBP4-206ENST00000546155 TNIKQ9UKE5 1360 aa33.6■■■□□ 2.97
LTBP4-206ENST00000546155 NPM1P06748 294 aaKnown RBP eCLIP33.6■■■□□ 2.97
LTBP4-206ENST00000546155 DISP1Q96F81 1524 aa33.56■■■□□ 2.96
LTBP4-206ENST00000546155 EEA1Q15075 1411 aa33.54■■■□□ 2.96
LTBP4-206ENST00000546155 UGGT2Q9NYU1 1516 aa33.53■■■□□ 2.96
LTBP4-206ENST00000546155 ADCY10Q96PN6 1610 aa33.47■■■□□ 2.95
LTBP4-206ENST00000546155 EHMT2Q96KQ7 1210 aa33.45■■■□□ 2.95
LTBP4-206ENST00000546155 CTTNBP2Q8WZ74 1663 aa33.42■■■□□ 2.94
LTBP4-206ENST00000546155 KIAA0556O60303 1618 aa33.4■■■□□ 2.94
LTBP4-206ENST00000546155 RANGAP1P46060 587 aaPredicted RBP33.4■■■□□ 2.94
LTBP4-206ENST00000546155 P3H3Q8IVL6 736 aa33.39■■■□□ 2.94
LTBP4-206ENST00000546155 UACAQ9BZF9 1416 aa33.36■■■□□ 2.93
LTBP4-206ENST00000546155 FAM69CQ0P6D2 419 aa33.35■■■□□ 2.93
LTBP4-206ENST00000546155 GOLGA3Q08378 1498 aa33.34■■■□□ 2.93
LTBP4-206ENST00000546155 ABCC2Q92887 1545 aa33.28■■■□□ 2.92
LTBP4-206ENST00000546155 MAPKBP1O60336 1514 aa33.27■■■□□ 2.92
LTBP4-206ENST00000546155 UHRF1BP1LA0JNW5 1464 aa33.25■■■□□ 2.91
LTBP4-206ENST00000546155 ABCC10Q5T3U5 1492 aa33.24■■■□□ 2.91
LTBP4-206ENST00000546155 PLB1Q6P1J6 1458 aa33.22■■■□□ 2.91
LTBP4-206ENST00000546155 UBTFP17480 764 aaKnown RBP33.21■■■□□ 2.91
LTBP4-206ENST00000546155 KIF21BO75037 1637 aa33.18■■■□□ 2.9
LTBP4-206ENST00000546155 ASXL2Q76L83 1435 aa33.17■■■□□ 2.9
LTBP4-206ENST00000546155 ARID3CA6NKF2 412 aa33.14■■■□□ 2.9
LTBP4-206ENST00000546155 KIF13AQ9H1H9 1805 aa33.14■■■□□ 2.9
LTBP4-206ENST00000546155 DIP2BQ9P265 1576 aa33.12■■■□□ 2.89
LTBP4-206ENST00000546155 KDM5BQ9UGL1 1544 aa33.12■■■□□ 2.89
LTBP4-206ENST00000546155 ABCA8O94911 1581 aa33.07■■■□□ 2.88
LTBP4-206ENST00000546155 SAMD9Q5K651 1589 aa33.04■■■□□ 2.88
LTBP4-206ENST00000546155 FHOD3Q2V2M9 1422 aa33.04■■■□□ 2.88
LTBP4-206ENST00000546155 ZCCHC11Q5TAX3 1644 aaKnown RBP33.02■■■□□ 2.88
LTBP4-206ENST00000546155 KCNH8Q96L42 1107 aa32.96■■■□□ 2.87
LTBP4-206ENST00000546155 EPRSP07814 1512 aaKnown RBP32.93■■■□□ 2.86
LTBP4-206ENST00000546155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.92■■■□□ 2.86
LTBP4-206ENST00000546155 HNRNPUL2Q1KMD3 747 aaKnown RBP32.92■■■□□ 2.86
LTBP4-206ENST00000546155 WDR7Q9Y4E6 1490 aa32.9■■■□□ 2.86
LTBP4-206ENST00000546155 ATP10BO94823 1461 aa32.88■■■□□ 2.85
LTBP4-206ENST00000546155 TSPOAP1O95153 1857 aa32.88■■■□□ 2.85
LTBP4-206ENST00000546155 GLI2P10070 1586 aa32.86■■■□□ 2.85
LTBP4-206ENST00000546155 EFCAB5A4FU69 1503 aa32.86■■■□□ 2.85
LTBP4-206ENST00000546155 RAPGEF6Q8TEU7 1601 aa32.83■■■□□ 2.85
LTBP4-206ENST00000546155 ATP1B4Q9UN42 357 aaPredicted RBP32.79■■■□□ 2.84
LTBP4-206ENST00000546155 NUP153P49790 1475 aaKnown RBP32.77■■■□□ 2.84
LTBP4-206ENST00000546155 ARHGAP35Q9NRY4 1499 aa32.77■■■□□ 2.84
LTBP4-206ENST00000546155 KDM6BO15054 1643 aa32.69■■■□□ 2.82
LTBP4-206ENST00000546155 CD109Q6YHK3 1445 aa32.69■■■□□ 2.82
LTBP4-206ENST00000546155 MAP3K4Q9Y6R4 1608 aa32.68■■■□□ 2.82
LTBP4-206ENST00000546155 PPRC1Q5VV67 1664 aaKnown RBP32.68■■■□□ 2.82
LTBP4-206ENST00000546155 PLEKHD1A6NEE1 506 aa32.65■■■□□ 2.82
LTBP4-206ENST00000546155 FMN1Q68DA7 1419 aa32.63■■■□□ 2.81
LTBP4-206ENST00000546155 TEX14Q8IWB6 1497 aa32.62■■■□□ 2.81
LTBP4-206ENST00000546155 COL17A1Q9UMD9 1497 aaPredicted RBP32.58■■■□□ 2.81
LTBP4-206ENST00000546155 CDK13Q14004 1512 aaKnown RBP32.56■■■□□ 2.8
LTBP4-206ENST00000546155 MAGI3Q5TCQ9 1506 aa32.54■■■□□ 2.8
LTBP4-206ENST00000546155 CLIP1P30622 1438 aa32.53■■■□□ 2.8
LTBP4-206ENST00000546155 CFAP43Q8NDM7 1665 aa32.52■■■□□ 2.8
LTBP4-206ENST00000546155 LOC105371045A0A1W2PR82 267 aa32.48■■■□□ 2.79
LTBP4-206ENST00000546155 HECW1Q76N89 1606 aa32.45■■■□□ 2.79
LTBP4-206ENST00000546155 AEBP2Q6ZN18 517 aaPredicted RBP32.45■■■□□ 2.79
LTBP4-206ENST00000546155 ABCA9Q8IUA7 1624 aa32.44■■■□□ 2.78
LTBP4-206ENST00000546155 CDK11AQ9UQ88 783 aaPredicted RBP32.4■■■□□ 2.78
LTBP4-206ENST00000546155 CASKIN1Q8WXD9 1431 aa32.36■■■□□ 2.77
LTBP4-206ENST00000546155 PCF11O94913 1555 aaKnown RBP32.34■■■□□ 2.77
LTBP4-206ENST00000546155 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.33■■■□□ 2.773e-6■■□□□ 13.1
LTBP4-206ENST00000546155 CEP162Q5TB80 1403 aa32.31■■■□□ 2.76
LTBP4-206ENST00000546155 RAPGEF3O95398 923 aa32.3■■■□□ 2.76
LTBP4-206ENST00000546155 TTC37Q6PGP7 1564 aa32.27■■■□□ 2.76
LTBP4-206ENST00000546155 TROQ12816 1431 aaPredicted RBP32.26■■■□□ 2.76
LTBP4-206ENST00000546155 PHLDB1Q86UU1 1377 aa32.26■■■□□ 2.75
LTBP4-206ENST00000546155 NEO1Q92859 1461 aa32.26■■■□□ 2.75
LTBP4-206ENST00000546155 ARAP3Q8WWN8 1544 aa32.26■■■□□ 2.75
LTBP4-206ENST00000546155 KDM4FA0A1W2PPD8 638 aa32.24■■■□□ 2.75
LTBP4-206ENST00000546155 FYCO1Q9BQS8 1478 aa32.23■■■□□ 2.75
LTBP4-206ENST00000546155 LRRIQ1Q96JM4 1722 aa32.22■■■□□ 2.75
LTBP4-206ENST00000546155 CCDC18Q5T9S5 1454 aa32.22■■■□□ 2.75
LTBP4-206ENST00000546155 FANCAO15360 1455 aa32.21■■■□□ 2.75
LTBP4-206ENST00000546155 AKNAQ7Z591 1439 aa32.19■■■□□ 2.74
LTBP4-206ENST00000546155 KIF14Q15058 1648 aa32.17■■■□□ 2.74
LTBP4-206ENST00000546155 PLCH2O75038 1416 aa32.17■■■□□ 2.74
LTBP4-206ENST00000546155 EFCAB2Q5VUJ9 269 aa32.13■■■□□ 2.73
LTBP4-206ENST00000546155 DENND4BO75064 1496 aaPredicted RBP32.11■■■□□ 2.73
LTBP4-206ENST00000546155 ADGRL1O94910 1474 aa32.05■■■□□ 2.72
LTBP4-206ENST00000546155 SCAPERQ9BY12 1400 aa32.05■■■□□ 2.72
LTBP4-206ENST00000546155 CFAP74Q9C0B2 1584 aa32.03■■■□□ 2.72
LTBP4-206ENST00000546155 FRMPD1Q5SYB0 1578 aa32.02■■■□□ 2.72
LTBP4-206ENST00000546155 ARHGAP5Q13017 1502 aa32.02■■■□□ 2.72
LTBP4-206ENST00000546155 MTUS2Q5JR59 1369 aa32■■■□□ 2.71
LTBP4-206ENST00000546155 MYO5CQ9NQX4 1742 aa31.98■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms