RNA–Protein interactions for RNA: ENST00000545467.5

LDHA-224, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-224ENST00000545467 FBXO41Q8TF61 875 aa13.68□□□□□ -0.22
LDHA-224ENST00000545467 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
LDHA-224ENST00000545467 CUX1P39880 1505 aa13.67□□□□□ -0.22
LDHA-224ENST00000545467 MAPKBP1O60336 1514 aa13.66□□□□□ -0.22
LDHA-224ENST00000545467 DIP2BQ9P265 1576 aa13.65□□□□□ -0.22
LDHA-224ENST00000545467 HECW2Q9P2P5 1572 aa13.64□□□□□ -0.23
LDHA-224ENST00000545467 ABCA10Q8WWZ4 1543 aa13.63□□□□□ -0.23
LDHA-224ENST00000545467 ADGRL1O94910 1474 aa13.62□□□□□ -0.23
LDHA-224ENST00000545467 PRG4Q92954 1404 aaPredicted RBP13.62□□□□□ -0.23
LDHA-224ENST00000545467 ABCA5Q8WWZ7 1642 aa13.61□□□□□ -0.23
LDHA-224ENST00000545467 JPH4Q96JJ6 628 aa13.61□□□□□ -0.23
LDHA-224ENST00000545467 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
LDHA-224ENST00000545467 TSPOAP1O95153 1857 aa13.57□□□□□ -0.24
LDHA-224ENST00000545467 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
LDHA-224ENST00000545467 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
LDHA-224ENST00000545467 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.25
LDHA-224ENST00000545467 ADCY10Q96PN6 1610 aa13.51□□□□□ -0.25
LDHA-224ENST00000545467 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
LDHA-224ENST00000545467 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
LDHA-224ENST00000545467 PPP6R1Q9UPN7 881 aa13.44□□□□□ -0.26
LDHA-224ENST00000545467 ERICH3Q5RHP9 1530 aa13.44□□□□□ -0.26
LDHA-224ENST00000545467 SOCS7O14512 581 aa13.42□□□□□ -0.26
LDHA-224ENST00000545467 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
LDHA-224ENST00000545467 ADRA2BP18089 450 aa13.4□□□□□ -0.26
LDHA-224ENST00000545467 GLI2P10070 1586 aa13.4□□□□□ -0.26
LDHA-224ENST00000545467 PPRC1Q5VV67 1664 aaKnown RBP13.4□□□□□ -0.26
LDHA-224ENST00000545467 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
LDHA-224ENST00000545467 PLB1Q6P1J6 1458 aa13.38□□□□□ -0.27
LDHA-224ENST00000545467 RUSC2Q8N2Y8 1516 aa13.38□□□□□ -0.27
LDHA-224ENST00000545467 ASXL2Q76L83 1435 aa13.36□□□□□ -0.27
LDHA-224ENST00000545467 PTPRGP23470 1445 aa13.34□□□□□ -0.27
LDHA-224ENST00000545467 ILDR2Q71H61 639 aa13.34□□□□□ -0.27
LDHA-224ENST00000545467 ABCC2Q92887 1545 aa13.34□□□□□ -0.27
LDHA-224ENST00000545467 TEX14Q8IWB6 1497 aa13.33□□□□□ -0.28
LDHA-224ENST00000545467 KIAA0586Q9BVV6 1533 aa13.32□□□□□ -0.28
LDHA-224ENST00000545467 DISP3Q9P2K9 1392 aa13.28□□□□□ -0.28
LDHA-224ENST00000545467 EPRSP07814 1512 aaKnown RBP13.27□□□□□ -0.29
LDHA-224ENST00000545467 TNIKQ9UKE5 1360 aa13.26□□□□□ -0.29
LDHA-224ENST00000545467 MAP3K4Q9Y6R4 1608 aa13.26□□□□□ -0.29
LDHA-224ENST00000545467 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
LDHA-224ENST00000545467 UHRF1BP1LA0JNW5 1464 aa13.24□□□□□ -0.29
LDHA-224ENST00000545467 TTBK1Q5TCY1 1321 aaPredicted RBP13.24□□□□□ -0.29
LDHA-224ENST00000545467 CARMIL2Q6F5E8 1435 aa13.22□□□□□ -0.29
LDHA-224ENST00000545467 CERKQ8TCT0 537 aa13.21□□□□□ -0.29
LDHA-224ENST00000545467 UACAQ9BZF9 1416 aa13.21□□□□□ -0.3
LDHA-224ENST00000545467 PTPRMP28827 1452 aa13.2□□□□□ -0.3
LDHA-224ENST00000545467 CUL7Q14999 1698 aa13.2□□□□□ -0.3
LDHA-224ENST00000545467 KDM5BQ9UGL1 1544 aa13.18□□□□□ -0.3
LDHA-224ENST00000545467 PCF11O94913 1555 aaKnown RBP13.16□□□□□ -0.3
LDHA-224ENST00000545467 MAGI3Q5TCQ9 1506 aa13.15□□□□□ -0.3
LDHA-224ENST00000545467 KIF21BO75037 1637 aa13.14□□□□□ -0.31
LDHA-224ENST00000545467 IGF1RP08069 1367 aa13.14□□□□□ -0.31
LDHA-224ENST00000545467 CD109Q6YHK3 1445 aa13.13□□□□□ -0.31
LDHA-224ENST00000545467 ADAMTSL3P82987 1691 aa13.12□□□□□ -0.31
LDHA-224ENST00000545467 WDR7Q9Y4E6 1490 aa13.11□□□□□ -0.31
LDHA-224ENST00000545467 ZCCHC11Q5TAX3 1644 aaKnown RBP13.09□□□□□ -0.31
LDHA-224ENST00000545467 HSPA2P54652 639 aa13.07□□□□□ -0.32
LDHA-224ENST00000545467 ARAP3Q8WWN8 1544 aa13.07□□□□□ -0.32
LDHA-224ENST00000545467 SPATA31D1Q6ZQQ2 1576 aa13.06□□□□□ -0.32
LDHA-224ENST00000545467 CFAP43Q8NDM7 1665 aa13.05□□□□□ -0.32
LDHA-224ENST00000545467 DISP1Q96F81 1524 aa13.05□□□□□ -0.32
LDHA-224ENST00000545467 KCNH8Q96L42 1107 aa13.05□□□□□ -0.32
LDHA-224ENST00000545467 KIF27Q86VH2 1401 aa13.05□□□□□ -0.32
LDHA-224ENST00000545467 IQGAP2Q13576 1575 aa13.04□□□□□ -0.32
LDHA-224ENST00000545467 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
LDHA-224ENST00000545467 ARID4BQ4LE39 1312 aaPredicted RBP13.02□□□□□ -0.33
LDHA-224ENST00000545467 PHLDB1Q86UU1 1377 aa13.02□□□□□ -0.33
LDHA-224ENST00000545467 BCORL1Q5H9F3 1711 aa13.01□□□□□ -0.33
LDHA-224ENST00000545467 MADDQ8WXG6 1647 aa13□□□□□ -0.33
LDHA-224ENST00000545467 RAPGEF3O95398 923 aa12.97□□□□□ -0.33
LDHA-224ENST00000545467 UGGT2Q9NYU1 1516 aa12.96□□□□□ -0.33
LDHA-224ENST00000545467 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
LDHA-224ENST00000545467 RIMS1Q86UR5 1692 aaKnown RBP12.93□□□□□ -0.34
LDHA-224ENST00000545467 KIAA0556O60303 1618 aa12.92□□□□□ -0.34
LDHA-224ENST00000545467 YEATS2Q9ULM3 1422 aa12.9□□□□□ -0.34
LDHA-224ENST00000545467 NEO1Q92859 1461 aa12.89□□□□□ -0.35
LDHA-224ENST00000545467 POGZQ7Z3K3 1410 aa12.88□□□□□ -0.35
LDHA-224ENST00000545467 ABCA8O94911 1581 aa12.86□□□□□ -0.35
LDHA-224ENST00000545467 FRMPD1Q5SYB0 1578 aa12.84□□□□□ -0.35
LDHA-224ENST00000545467 ARHGEF40Q8TER5 1519 aa12.83□□□□□ -0.35
LDHA-224ENST00000545467 ABCA9Q8IUA7 1624 aa12.83□□□□□ -0.36
LDHA-224ENST00000545467 FANCAO15360 1455 aa12.83□□□□□ -0.36
LDHA-224ENST00000545467 IQSEC2Q5JU85 1478 aa12.83□□□□□ -0.36
LDHA-224ENST00000545467 AKNAQ7Z591 1439 aa12.81□□□□□ -0.36
LDHA-224ENST00000545467 GOLGA3Q08378 1498 aa12.81□□□□□ -0.36
LDHA-224ENST00000545467 RAPGEF2Q9Y4G8 1499 aa12.81□□□□□ -0.36
LDHA-224ENST00000545467 STRCQ7RTU9 1775 aa12.81□□□□□ -0.36
LDHA-224ENST00000545467 PTPRTO14522 1441 aa12.8□□□□□ -0.36
LDHA-224ENST00000545467 FAM9AQ8IZU1 332 aaPredicted RBP12.8□□□□□ -0.36
LDHA-224ENST00000545467 FHOD3Q2V2M9 1422 aa12.79□□□□□ -0.36
LDHA-224ENST00000545467 DENND4BO75064 1496 aaPredicted RBP12.78□□□□□ -0.36
LDHA-224ENST00000545467 ATP10BO94823 1461 aa12.78□□□□□ -0.36
LDHA-224ENST00000545467 TTC37Q6PGP7 1564 aa12.78□□□□□ -0.36
LDHA-224ENST00000545467 SETD1BQ9UPS6 1966 aaKnown RBP12.78□□□□□ -0.36
LDHA-224ENST00000545467 MLECQ14165 292 aa12.78□□□□□ -0.36
LDHA-224ENST00000545467 PREX1Q8TCU6 1659 aa12.77□□□□□ -0.36
LDHA-224ENST00000545467 ARID3CA6NKF2 412 aa12.76□□□□□ -0.37
LDHA-224ENST00000545467 LTBP4Q8N2S1 1624 aa12.76□□□□□ -0.37
LDHA-224ENST00000545467 FER1L4A9Z1Z3 1794 aa12.75□□□□□ -0.37
LDHA-224ENST00000545467 UHRF1BP1Q6BDS2 1440 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms