RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 FAM212AQ96EL1 285 aa15.19■□□□□ 0.02
LEMD3-206ENST00000545026 RASEFQ8IZ41 740 aa15.18■□□□□ 0.02
LEMD3-206ENST00000545026 CFAP44Q96MT7 982 aa15.14■□□□□ 0.01
LEMD3-206ENST00000545026 HS6ST3Q8IZP7 471 aa15.13■□□□□ 0.01
LEMD3-206ENST00000545026 VSIG10Q8N0Z9 540 aa15.12■□□□□ 0.01
LEMD3-206ENST00000545026 SPRYD3Q8NCJ5 442 aa15.11■□□□□ 0.01
LEMD3-206ENST00000545026 RIOK3O14730 519 aaKnown RBP15.1■□□□□ 0.01
LEMD3-206ENST00000545026 CHRM1P11229 460 aaPredicted RBP15.1■□□□□ 0.01
LEMD3-206ENST00000545026 CHADLQ6NUI6 762 aa15.07■□□□□ 0
LEMD3-206ENST00000545026 DNAJC5Q9H3Z4 198 aa15.05■□□□□ -0
LEMD3-206ENST00000545026 TAOK2Q9UL54 1235 aa15.04■□□□□ -0
LEMD3-206ENST00000545026 KDM2AQ9Y2K7 1162 aa15.01□□□□□ -0.01
LEMD3-206ENST00000545026 VGFO15240 615 aaPredicted RBP14.99□□□□□ -0.01
LEMD3-206ENST00000545026 PYGBP11216 843 aa14.98□□□□□ -0.01
LEMD3-206ENST00000545026 FARP1Q9Y4F1 1045 aaPredicted RBP14.98□□□□□ -0.01
LEMD3-206ENST00000545026 TSHZ2Q9NRE2 1034 aa14.97□□□□□ -0.01
LEMD3-206ENST00000545026 NKX1-1Q15270 411 aaPredicted RBP14.94□□□□□ -0.02
LEMD3-206ENST00000545026 SGIP1Q9BQI5 828 aa14.94□□□□□ -0.02
LEMD3-206ENST00000545026 STK25O00506 426 aa14.92□□□□□ -0.02
LEMD3-206ENST00000545026 PRKAR2AP13861 404 aaKnown RBP14.92□□□□□ -0.02
LEMD3-206ENST00000545026 FXR2P51116 673 aaKnown RBP eCLIP14.92□□□□□ -0.02
LEMD3-206ENST00000545026 TSPYL2Q9H2G4 693 aaPredicted RBP14.9□□□□□ -0.02
LEMD3-206ENST00000545026 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.88□□□□□ -0.03
LEMD3-206ENST00000545026 ZFP91Q96JP5 570 aaPredicted RBP14.88□□□□□ -0.03
LEMD3-206ENST00000545026 GTPBP6O43824 516 aaPredicted RBP14.85□□□□□ -0.03
LEMD3-206ENST00000545026 BCANQ96GW7 911 aa14.84□□□□□ -0.03
LEMD3-206ENST00000545026 BCL11BQ9C0K0 894 aaPredicted RBP14.84□□□□□ -0.03
LEMD3-206ENST00000545026 CHRDL2Q6WN34 429 aa14.82□□□□□ -0.04
LEMD3-206ENST00000545026 STK24Q9Y6E0 443 aa14.82□□□□□ -0.04
LEMD3-206ENST00000545026 CCDC61Q9Y6R9 512 aa14.8□□□□□ -0.04
LEMD3-206ENST00000545026 ZNF467Q7Z7K2 595 aaPredicted RBP14.78□□□□□ -0.04
LEMD3-206ENST00000545026 PIP4P2Q8N4L2 257 aa14.78□□□□□ -0.04
LEMD3-206ENST00000545026 PCDHB8Q9UN66 801 aa14.73□□□□□ -0.05
LEMD3-206ENST00000545026 PCDHB13Q9Y5F0 798 aa14.73□□□□□ -0.05
LEMD3-206ENST00000545026 PDAP1Q13442 181 aaKnown RBP14.7□□□□□ -0.06
LEMD3-206ENST00000545026 ZNF579Q8NAF0 562 aaKnown RBP14.68□□□□□ -0.06
LEMD3-206ENST00000545026 RYDENQ9NUL5 291 aaKnown RBP14.68□□□□□ -0.06
LEMD3-206ENST00000545026 PAK3O75914 559 aaPredicted RBP14.67□□□□□ -0.06
LEMD3-206ENST00000545026 PSEN1P49768 467 aa14.63□□□□□ -0.07
LEMD3-206ENST00000545026 KIF12Q96FN5 646 aa14.62□□□□□ -0.07
LEMD3-206ENST00000545026 MAP3K13O43283 966 aa14.6□□□□□ -0.07
LEMD3-206ENST00000545026 IFNL1Q8IU54 200 aa14.6□□□□□ -0.07
LEMD3-206ENST00000545026 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
LEMD3-206ENST00000545026 ZRANB1Q9UGI0 708 aa14.53□□□□□ -0.08
LEMD3-206ENST00000545026 MFRPQ9BY79 579 aa14.51□□□□□ -0.09
LEMD3-206ENST00000545026 PRKCSHP14314 528 aaPredicted RBP14.49□□□□□ -0.09
LEMD3-206ENST00000545026 POTEHQ6S545 545 aa14.49□□□□□ -0.09
LEMD3-206ENST00000545026 PHF12Q96QT6 1004 aa14.47□□□□□ -0.09
LEMD3-206ENST00000545026 EFCAB3Q8N7B9 438 aa14.44□□□□□ -0.1
LEMD3-206ENST00000545026 CABP2Q9NPB3 220 aa14.43□□□□□ -0.1
LEMD3-206ENST00000545026 NBR1Q14596 966 aa14.42□□□□□ -0.1
LEMD3-206ENST00000545026 CADPS2Q86UW7 1296 aa14.42□□□□□ -0.1
LEMD3-206ENST00000545026 FBXO22Q8NEZ5 403 aa14.4□□□□□ -0.1
LEMD3-206ENST00000545026 C19orf67A6NJJ6 358 aa14.39□□□□□ -0.11
LEMD3-206ENST00000545026 SOX12O15370 315 aa14.39□□□□□ -0.11
LEMD3-206ENST00000545026 NLRP6P59044 892 aa14.37□□□□□ -0.11
LEMD3-206ENST00000545026 TPRNQ4KMQ1 711 aa14.37□□□□□ -0.11
LEMD3-206ENST00000545026 PHF8Q9UPP1 1060 aa14.37□□□□□ -0.11
LEMD3-206ENST00000545026 PPP1R37O75864 691 aa14.36□□□□□ -0.11
LEMD3-206ENST00000545026 MS4A3Q96HJ5 214 aa14.33□□□□□ -0.12
LEMD3-206ENST00000545026 TRPC6Q9Y210 931 aa14.31□□□□□ -0.12
LEMD3-206ENST00000545026 TMEM106CQ9BVX2 250 aa14.3□□□□□ -0.12
LEMD3-206ENST00000545026 P3H3Q8IVL6 736 aa14.26□□□□□ -0.13
LEMD3-206ENST00000545026 MS4A4AQ96JQ5 239 aa14.26□□□□□ -0.13
LEMD3-206ENST00000545026 WDR70Q9NW82 654 aa14.26□□□□□ -0.13
LEMD3-206ENST00000545026 GOLGA2Q08379 1002 aa14.21□□□□□ -0.13
LEMD3-206ENST00000545026 KCNV2Q8TDN2 545 aa14.21□□□□□ -0.13
LEMD3-206ENST00000545026 TIE1P35590 1138 aa14.19□□□□□ -0.14
LEMD3-206ENST00000545026 TTLL13PA6NNM8 815 aa14.16□□□□□ -0.14
LEMD3-206ENST00000545026 MKRN3Q13064 507 aaKnown RBP14.16□□□□□ -0.14
LEMD3-206ENST00000545026 BMP2KQ9NSY1 1161 aaPredicted RBP14.14□□□□□ -0.15
LEMD3-206ENST00000545026 NCKAP5LQ9HCH0 1330 aa14.13□□□□□ -0.15
LEMD3-206ENST00000545026 GALR2O43603 387 aaPredicted RBP14.12□□□□□ -0.15
LEMD3-206ENST00000545026 ILDR1Q86SU0 546 aaPredicted RBP14.11□□□□□ -0.15
LEMD3-206ENST00000545026 HAX1O00165 279 aa14.1□□□□□ -0.15
LEMD3-206ENST00000545026 EVX2Q03828 476 aa14.1□□□□□ -0.15
LEMD3-206ENST00000545026 E2F4Q16254 413 aa14.08□□□□□ -0.16
LEMD3-206ENST00000545026 PDE4AP27815 886 aa14.06□□□□□ -0.16
LEMD3-206ENST00000545026 ARHGEF1Q92888 912 aaKnown RBP14.06□□□□□ -0.16
LEMD3-206ENST00000545026 CRISPLD2Q9H0B8 497 aa14.06□□□□□ -0.16
LEMD3-206ENST00000545026 TRIM35Q9UPQ4 493 aa14.06□□□□□ -0.16
LEMD3-206ENST00000545026 CLCN6P51797 869 aa14.05□□□□□ -0.16
LEMD3-206ENST00000545026 LARP6Q9BRS8 491 aaKnown RBP14.05□□□□□ -0.16
LEMD3-206ENST00000545026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.05□□□□□ -0.16
LEMD3-206ENST00000545026 MFSD10Q14728 455 aa14.04□□□□□ -0.16
LEMD3-206ENST00000545026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.97□□□□□ -0.17
LEMD3-206ENST00000545026 DDX27Q96GQ7 796 aaKnown RBP13.97□□□□□ -0.17
LEMD3-206ENST00000545026 ATN1P54259 1190 aaPredicted RBP13.96□□□□□ -0.17
LEMD3-206ENST00000545026 DPY19L2Q6NUT2 758 aa13.96□□□□□ -0.17
LEMD3-206ENST00000545026 ATMINO43313 823 aaPredicted RBP13.94□□□□□ -0.18
LEMD3-206ENST00000545026 ASTLQ6HA08 431 aaPredicted RBP13.93□□□□□ -0.18
LEMD3-206ENST00000545026 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
LEMD3-206ENST00000545026 PDCD7Q8N8D1 485 aaKnown RBP13.93□□□□□ -0.18
LEMD3-206ENST00000545026 CAMK2BQ13554 666 aa13.92□□□□□ -0.18
LEMD3-206ENST00000545026 ARIH1Q9Y4X5 557 aaPredicted RBP13.91□□□□□ -0.18
LEMD3-206ENST00000545026 SEMA3EO15041 775 aa13.9□□□□□ -0.18
LEMD3-206ENST00000545026 IRX5P78411 483 aaPredicted RBP13.9□□□□□ -0.18
LEMD3-206ENST00000545026 TESPA1A2RU30 521 aaPredicted RBP13.89□□□□□ -0.19
LEMD3-206ENST00000545026 GPHNQ9NQX3 736 aaPredicted RBP13.89□□□□□ -0.19
LEMD3-206ENST00000545026 MICALL2Q8IY33 904 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms