RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 CHMP7Q8WUX9 453 aaPredicted RBP7.85□□□□□ -1.15
CNGA1-209ENST00000544810 MAGI1Q96QZ7 1491 aaPredicted RBP7.84□□□□□ -1.15
CNGA1-209ENST00000544810 RAD54L2Q9Y4B4 1467 aa7.83□□□□□ -1.16
CNGA1-209ENST00000544810 WDR97A6NE52 1622 aa7.82□□□□□ -1.16
CNGA1-209ENST00000544810 CCDC88BA6NC98 1476 aa7.82□□□□□ -1.16
CNGA1-209ENST00000544810 KDM4FA0A1W2PPD8 638 aa7.82□□□□□ -1.16
CNGA1-209ENST00000544810 SYNJ2O15056 1496 aa7.82□□□□□ -1.16
CNGA1-209ENST00000544810 SOGA1O94964 1423 aa7.81□□□□□ -1.16
CNGA1-209ENST00000544810 GRIN2BQ13224 1484 aa7.8□□□□□ -1.16
CNGA1-209ENST00000544810 PELP1Q8IZL8 1130 aaKnown RBP7.8□□□□□ -1.16
CNGA1-209ENST00000544810 SLC4A2P04920 1241 aa7.79□□□□□ -1.16
CNGA1-209ENST00000544810 ERCC6L2Q5T890 1561 aa7.78□□□□□ -1.16
CNGA1-209ENST00000544810 KIF13AQ9H1H9 1805 aa7.77□□□□□ -1.17
CNGA1-209ENST00000544810 FGD5Q6ZNL6 1462 aa7.76□□□□□ -1.17
CNGA1-209ENST00000544810 RNF216Q9NWF9 866 aaPredicted RBP7.75□□□□□ -1.17
CNGA1-209ENST00000544810 CEP170Q5SW79 1584 aa7.73□□□□□ -1.17
CNGA1-209ENST00000544810 ABCC10Q5T3U5 1492 aa7.72□□□□□ -1.17
CNGA1-209ENST00000544810 KDM6BO15054 1643 aa7.71□□□□□ -1.17
CNGA1-209ENST00000544810 FAM69CQ0P6D2 419 aa7.71□□□□□ -1.18
CNGA1-209ENST00000544810 NUP160Q12769 1436 aa7.7□□□□□ -1.18
CNGA1-209ENST00000544810 GRIN2AQ12879 1464 aa7.7□□□□□ -1.18
CNGA1-209ENST00000544810 PBRM1Q86U86 1689 aa7.7□□□□□ -1.18
CNGA1-209ENST00000544810 PRKCSHP14314 528 aaPredicted RBP7.7□□□□□ -1.18
CNGA1-209ENST00000544810 SHROOM2Q13796 1616 aa7.69□□□□□ -1.18
CNGA1-209ENST00000544810 CUX1P39880 1505 aa7.69□□□□□ -1.18
CNGA1-209ENST00000544810 DIP2BQ9P265 1576 aa7.69□□□□□ -1.18
CNGA1-209ENST00000544810 HECW2Q9P2P5 1572 aa7.69□□□□□ -1.18
CNGA1-209ENST00000544810 MAPKBP1O60336 1514 aa7.68□□□□□ -1.18
CNGA1-209ENST00000544810 ABCA5Q8WWZ7 1642 aa7.67□□□□□ -1.18
CNGA1-209ENST00000544810 ADGRL1O94910 1474 aa7.67□□□□□ -1.18
CNGA1-209ENST00000544810 FBXO41Q8TF61 875 aa7.66□□□□□ -1.18
CNGA1-209ENST00000544810 ABCA10Q8WWZ4 1543 aa7.65□□□□□ -1.18
CNGA1-209ENST00000544810 ADAMTS12P58397 1594 aa7.65□□□□□ -1.18
CNGA1-209ENST00000544810 PRG4Q92954 1404 aaPredicted RBP7.64□□□□□ -1.19
CNGA1-209ENST00000544810 MYCNP04198 464 aaPredicted RBP7.63□□□□□ -1.19
CNGA1-209ENST00000544810 NPM1P06748 294 aaKnown RBP eCLIP7.63□□□□□ -1.19
CNGA1-209ENST00000544810 MYT1Q01538 1121 aa7.63□□□□□ -1.19
CNGA1-209ENST00000544810 HRCP23327 699 aa7.62□□□□□ -1.19
CNGA1-209ENST00000544810 FHAD1B1AJZ9 1412 aa7.61□□□□□ -1.19
CNGA1-209ENST00000544810 PLCB2Q00722 1185 aa7.61□□□□□ -1.19
CNGA1-209ENST00000544810 ADCY10Q96PN6 1610 aa7.61□□□□□ -1.19
CNGA1-209ENST00000544810 ATXN8OSP0DMR3 200 aa7.6□□□□□ -1.19
CNGA1-209ENST00000544810 CACNB1Q02641 598 aaPredicted RBP7.6□□□□□ -1.19
CNGA1-209ENST00000544810 ATF5Q9Y2D1 282 aaPredicted RBP7.59□□□□□ -1.19
CNGA1-209ENST00000544810 HAP1P54257 671 aaPredicted RBP7.59□□□□□ -1.19
CNGA1-209ENST00000544810 JPH4Q96JJ6 628 aa7.58□□□□□ -1.2
CNGA1-209ENST00000544810 LMTK3Q96Q04 1460 aa7.58□□□□□ -1.2
CNGA1-209ENST00000544810 TSPOAP1O95153 1857 aa7.57□□□□□ -1.2
CNGA1-209ENST00000544810 RUSC2Q8N2Y8 1516 aa7.55□□□□□ -1.2
CNGA1-209ENST00000544810 HOXD11P31277 338 aaPredicted RBP7.55□□□□□ -1.2
CNGA1-209ENST00000544810 COL17A1Q9UMD9 1497 aaPredicted RBP7.54□□□□□ -1.2
CNGA1-209ENST00000544810 ERICH3Q5RHP9 1530 aa7.54□□□□□ -1.2
CNGA1-209ENST00000544810 PPRC1Q5VV67 1664 aaKnown RBP7.54□□□□□ -1.2
CNGA1-209ENST00000544810 WRNQ14191 1432 aaPredicted RBP eCLIP7.54□□□□□ -1.2
CNGA1-209ENST00000544810 GLI2P10070 1586 aa7.53□□□□□ -1.2
CNGA1-209ENST00000544810 SOCS7O14512 581 aa7.51□□□□□ -1.21
CNGA1-209ENST00000544810 TOP2BQ02880 1626 aa7.51□□□□□ -1.21
CNGA1-209ENST00000544810 PLB1Q6P1J6 1458 aa7.5□□□□□ -1.21
CNGA1-209ENST00000544810 ASXL2Q76L83 1435 aa7.5□□□□□ -1.21
CNGA1-209ENST00000544810 ABCC2Q92887 1545 aa7.49□□□□□ -1.21
CNGA1-209ENST00000544810 ILDR2Q71H61 639 aa7.49□□□□□ -1.21
CNGA1-209ENST00000544810 TAOK2Q9UL54 1235 aa7.48□□□□□ -1.21
CNGA1-209ENST00000544810 TEX14Q8IWB6 1497 aa7.48□□□□□ -1.21
CNGA1-209ENST00000544810 C1QBPQ07021 282 aaKnown RBP7.48□□□□□ -1.21
CNGA1-209ENST00000544810 PTPRGP23470 1445 aa7.47□□□□□ -1.21
CNGA1-209ENST00000544810 KIAA0586Q9BVV6 1533 aa7.47□□□□□ -1.21
CNGA1-209ENST00000544810 BCANQ96GW7 911 aa7.46□□□□□ -1.21
CNGA1-209ENST00000544810 MAP3K4Q9Y6R4 1608 aa7.46□□□□□ -1.22
CNGA1-209ENST00000544810 EPRSP07814 1512 aaKnown RBP7.46□□□□□ -1.22
CNGA1-209ENST00000544810 DISP3Q9P2K9 1392 aa7.45□□□□□ -1.22
CNGA1-209ENST00000544810 BIVM-ERCC5R4GMW8 1640 aa7.45□□□□□ -1.22
CNGA1-209ENST00000544810 UHRF1BP1LA0JNW5 1464 aa7.44□□□□□ -1.22
CNGA1-209ENST00000544810 RNF39Q9H2S5 420 aa7.43□□□□□ -1.22
CNGA1-209ENST00000544810 TPRNQ4KMQ1 711 aa7.43□□□□□ -1.22
CNGA1-209ENST00000544810 TNIKQ9UKE5 1360 aa7.42□□□□□ -1.22
CNGA1-209ENST00000544810 PTPRMP28827 1452 aa7.41□□□□□ -1.22
CNGA1-209ENST00000544810 CUL7Q14999 1698 aa7.41□□□□□ -1.22
CNGA1-209ENST00000544810 PCF11O94913 1555 aaKnown RBP7.41□□□□□ -1.22
CNGA1-209ENST00000544810 TTBK1Q5TCY1 1321 aaPredicted RBP7.41□□□□□ -1.22
CNGA1-209ENST00000544810 UACAQ9BZF9 1416 aa7.4□□□□□ -1.22
CNGA1-209ENST00000544810 KDM5BQ9UGL1 1544 aa7.4□□□□□ -1.22
CNGA1-209ENST00000544810 KIF21BO75037 1637 aa7.4□□□□□ -1.22
CNGA1-209ENST00000544810 CARMIL2Q6F5E8 1435 aa7.39□□□□□ -1.23
CNGA1-209ENST00000544810 CERKQ8TCT0 537 aa7.39□□□□□ -1.23
CNGA1-209ENST00000544810 MAGI3Q5TCQ9 1506 aa7.38□□□□□ -1.23
CNGA1-209ENST00000544810 ADAMTSL3P82987 1691 aa7.38□□□□□ -1.23
CNGA1-209ENST00000544810 SPATA31D1Q6ZQQ2 1576 aa7.37□□□□□ -1.23
CNGA1-209ENST00000544810 WDR7Q9Y4E6 1490 aa7.36□□□□□ -1.23
CNGA1-209ENST00000544810 ZCCHC11Q5TAX3 1644 aaKnown RBP7.36□□□□□ -1.23
CNGA1-209ENST00000544810 CD109Q6YHK3 1445 aa7.35□□□□□ -1.23
CNGA1-209ENST00000544810 DCAF8L1A6NGE4 600 aa7.35□□□□□ -1.23
CNGA1-209ENST00000544810 KDM2AQ9Y2K7 1162 aa7.35□□□□□ -1.23
CNGA1-209ENST00000544810 IGF1RP08069 1367 aa7.35□□□□□ -1.23
CNGA1-209ENST00000544810 IFNLR1Q8IU57 520 aaPredicted RBP7.34□□□□□ -1.23
CNGA1-209ENST00000544810 DISP1Q96F81 1524 aa7.34□□□□□ -1.23
CNGA1-209ENST00000544810 VASPP50552 380 aaPredicted RBP7.33□□□□□ -1.24
CNGA1-209ENST00000544810 ARAP3Q8WWN8 1544 aa7.33□□□□□ -1.24
CNGA1-209ENST00000544810 FBXO3Q9UK99 471 aa7.33□□□□□ -1.24
CNGA1-209ENST00000544810 IQGAP2Q13576 1575 aa7.33□□□□□ -1.24
CNGA1-209ENST00000544810 CFAP43Q8NDM7 1665 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms