RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-208ENST00000544432 KIAA0586Q9BVV6 1533 aa23.75■■□□□ 1.39
VAMP1-208ENST00000544432 PRG4Q92954 1404 aaPredicted RBP23.75■■□□□ 1.39
VAMP1-208ENST00000544432 RUSC2Q8N2Y8 1516 aa23.74■■□□□ 1.39
VAMP1-208ENST00000544432 RAPGEF2Q9Y4G8 1499 aa23.62■■□□□ 1.37
VAMP1-208ENST00000544432 TRHP20396 242 aaPredicted RBP23.62■■□□□ 1.37
VAMP1-208ENST00000544432 IQGAP2Q13576 1575 aa23.52■■□□□ 1.36
VAMP1-208ENST00000544432 CARMIL2Q6F5E8 1435 aa23.5■■□□□ 1.35
VAMP1-208ENST00000544432 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
VAMP1-208ENST00000544432 PTPRGP23470 1445 aa23.45■■□□□ 1.34
VAMP1-208ENST00000544432 TNIKQ9UKE5 1360 aa23.45■■□□□ 1.34
VAMP1-208ENST00000544432 CSRNP3Q8WYN3 585 aa23.43■■□□□ 1.34
VAMP1-208ENST00000544432 UGGT2Q9NYU1 1516 aa23.43■■□□□ 1.34
VAMP1-208ENST00000544432 EEA1Q15075 1411 aa23.42■■□□□ 1.34
VAMP1-208ENST00000544432 NPM1P06748 294 aaKnown RBP eCLIP23.41■■□□□ 1.34
VAMP1-208ENST00000544432 DISP1Q96F81 1524 aa23.4■■□□□ 1.34
VAMP1-208ENST00000544432 ADCY10Q96PN6 1610 aa23.37■■□□□ 1.33
VAMP1-208ENST00000544432 MAPKBP1O60336 1514 aa23.33■■□□□ 1.32
VAMP1-208ENST00000544432 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
VAMP1-208ENST00000544432 CTTNBP2Q8WZ74 1663 aa23.32■■□□□ 1.32
VAMP1-208ENST00000544432 UHRF1BP1LA0JNW5 1464 aa23.3■■□□□ 1.32
VAMP1-208ENST00000544432 UACAQ9BZF9 1416 aa23.29■■□□□ 1.32
VAMP1-208ENST00000544432 KIAA0556O60303 1618 aa23.29■■□□□ 1.32
VAMP1-208ENST00000544432 GOLGA3Q08378 1498 aa23.29■■□□□ 1.32
VAMP1-208ENST00000544432 TTBK1Q5TCY1 1321 aaPredicted RBP23.29■■□□□ 1.32
VAMP1-208ENST00000544432 ABCC10Q5T3U5 1492 aa23.26■■□□□ 1.31
VAMP1-208ENST00000544432 ABCC2Q92887 1545 aa23.26■■□□□ 1.31
VAMP1-208ENST00000544432 FAM69CQ0P6D2 419 aa23.22■■□□□ 1.31
VAMP1-208ENST00000544432 KIF13AQ9H1H9 1805 aa23.2■■□□□ 1.3
VAMP1-208ENST00000544432 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
VAMP1-208ENST00000544432 KDM5BQ9UGL1 1544 aa23.17■■□□□ 1.3
VAMP1-208ENST00000544432 DIP2BQ9P265 1576 aa23.16■■□□□ 1.3
VAMP1-208ENST00000544432 PLB1Q6P1J6 1458 aa23.14■■□□□ 1.29
VAMP1-208ENST00000544432 ASXL2Q76L83 1435 aa23.13■■□□□ 1.29
VAMP1-208ENST00000544432 KIF21BO75037 1637 aa23.11■■□□□ 1.29
VAMP1-208ENST00000544432 ABCA8O94911 1581 aa23.08■■□□□ 1.29
VAMP1-208ENST00000544432 SAMD9Q5K651 1589 aa23.06■■□□□ 1.28
VAMP1-208ENST00000544432 P3H3Q8IVL6 736 aa23.05■■□□□ 1.28
VAMP1-208ENST00000544432 GLI2P10070 1586 aa23.04■■□□□ 1.28
VAMP1-208ENST00000544432 ZCCHC11Q5TAX3 1644 aaKnown RBP23.04■■□□□ 1.28
VAMP1-208ENST00000544432 EPRSP07814 1512 aaKnown RBP23■■□□□ 1.27
VAMP1-208ENST00000544432 WDR7Q9Y4E6 1490 aa22.97■■□□□ 1.27
VAMP1-208ENST00000544432 UBTFP17480 764 aaKnown RBP22.95■■□□□ 1.26
VAMP1-208ENST00000544432 EFCAB5A4FU69 1503 aa22.93■■□□□ 1.26
VAMP1-208ENST00000544432 RANGAP1P46060 587 aaPredicted RBP22.93■■□□□ 1.26
VAMP1-208ENST00000544432 ATP10BO94823 1461 aa22.92■■□□□ 1.26
VAMP1-208ENST00000544432 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
VAMP1-208ENST00000544432 TSPOAP1O95153 1857 aa22.9■■□□□ 1.26
VAMP1-208ENST00000544432 RAPGEF6Q8TEU7 1601 aa22.88■■□□□ 1.25
VAMP1-208ENST00000544432 MAP3K4Q9Y6R4 1608 aa22.87■■□□□ 1.25
VAMP1-208ENST00000544432 PPRC1Q5VV67 1664 aaKnown RBP22.85■■□□□ 1.25
VAMP1-208ENST00000544432 EHMT2Q96KQ7 1210 aa22.85■■□□□ 1.25
VAMP1-208ENST00000544432 KCNH8Q96L42 1107 aa22.85■■□□□ 1.25
VAMP1-208ENST00000544432 KDM6BO15054 1643 aa22.84■■□□□ 1.25
VAMP1-208ENST00000544432 TEX14Q8IWB6 1497 aa22.84■■□□□ 1.25
VAMP1-208ENST00000544432 NUP153P49790 1475 aaKnown RBP22.83■■□□□ 1.25
VAMP1-208ENST00000544432 ARID3CA6NKF2 412 aa22.82■■□□□ 1.24
VAMP1-208ENST00000544432 CD109Q6YHK3 1445 aa22.81■■□□□ 1.24
VAMP1-208ENST00000544432 MAGI3Q5TCQ9 1506 aa22.78■■□□□ 1.24
VAMP1-208ENST00000544432 ARHGAP35Q9NRY4 1499 aa22.78■■□□□ 1.24
VAMP1-208ENST00000544432 CFAP43Q8NDM7 1665 aa22.77■■□□□ 1.24
VAMP1-208ENST00000544432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.76■■□□□ 1.23
VAMP1-208ENST00000544432 HNRNPUL2Q1KMD3 747 aaKnown RBP22.76■■□□□ 1.23
VAMP1-208ENST00000544432 FMN1Q68DA7 1419 aa22.75■■□□□ 1.23
VAMP1-208ENST00000544432 PLEKHD1A6NEE1 506 aa22.72■■□□□ 1.23
VAMP1-208ENST00000544432 COL17A1Q9UMD9 1497 aaPredicted RBP22.72■■□□□ 1.23
VAMP1-208ENST00000544432 ABCA9Q8IUA7 1624 aa22.68■■□□□ 1.22
VAMP1-208ENST00000544432 PHLDB1Q86UU1 1377 aa22.66■■□□□ 1.22
VAMP1-208ENST00000544432 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
VAMP1-208ENST00000544432 HECW1Q76N89 1606 aa22.6■■□□□ 1.21
VAMP1-208ENST00000544432 ARAP3Q8WWN8 1544 aa22.6■■□□□ 1.21
VAMP1-208ENST00000544432 CDK13Q14004 1512 aaKnown RBP22.59■■□□□ 1.21
VAMP1-208ENST00000544432 ATP1B4Q9UN42 357 aaPredicted RBP22.59■■□□□ 1.21
VAMP1-208ENST00000544432 CDK11AQ9UQ88 783 aaPredicted RBP22.59■■□□□ 1.21
VAMP1-208ENST00000544432 NEO1Q92859 1461 aa22.57■■□□□ 1.2
VAMP1-208ENST00000544432 CLIP1P30622 1438 aa22.56■■□□□ 1.2
VAMP1-208ENST00000544432 CASKIN1Q8WXD9 1431 aa22.55■■□□□ 1.2
VAMP1-208ENST00000544432 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.53■■□□□ 1.2
VAMP1-208ENST00000544432 KDM4FA0A1W2PPD8 638 aa22.51■■□□□ 1.19
VAMP1-208ENST00000544432 TROQ12816 1431 aaPredicted RBP22.48■■□□□ 1.19
VAMP1-208ENST00000544432 CCDC18Q5T9S5 1454 aa22.47■■□□□ 1.19
VAMP1-208ENST00000544432 PLCH2O75038 1416 aa22.46■■□□□ 1.19
VAMP1-208ENST00000544432 FYCO1Q9BQS8 1478 aa22.46■■□□□ 1.19
VAMP1-208ENST00000544432 TTC37Q6PGP7 1564 aa22.46■■□□□ 1.19
VAMP1-208ENST00000544432 FANCAO15360 1455 aa22.45■■□□□ 1.18
VAMP1-208ENST00000544432 PCF11O94913 1555 aaKnown RBP22.44■■□□□ 1.18
VAMP1-208ENST00000544432 RAPGEF3O95398 923 aa22.44■■□□□ 1.18
VAMP1-208ENST00000544432 AKNAQ7Z591 1439 aa22.44■■□□□ 1.18
VAMP1-208ENST00000544432 LRRIQ1Q96JM4 1722 aa22.42■■□□□ 1.18
VAMP1-208ENST00000544432 CFAP74Q9C0B2 1584 aa22.42■■□□□ 1.18
VAMP1-208ENST00000544432 DENND4BO75064 1496 aaPredicted RBP22.4■■□□□ 1.18
VAMP1-208ENST00000544432 CEP162Q5TB80 1403 aa22.39■■□□□ 1.17
VAMP1-208ENST00000544432 KIF14Q15058 1648 aa22.39■■□□□ 1.17
VAMP1-208ENST00000544432 EFCAB2Q5VUJ9 269 aa22.38■■□□□ 1.17
VAMP1-208ENST00000544432 ADGRL1O94910 1474 aa22.37■■□□□ 1.17
VAMP1-208ENST00000544432 FRMPD1Q5SYB0 1578 aa22.35■■□□□ 1.17
VAMP1-208ENST00000544432 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.17
VAMP1-208ENST00000544432 MYO5CQ9NQX4 1742 aa22.31■■□□□ 1.16
VAMP1-208ENST00000544432 SCAPERQ9BY12 1400 aa22.31■■□□□ 1.16
VAMP1-208ENST00000544432 RICTORQ6R327 1708 aa22.3■■□□□ 1.16
VAMP1-208ENST00000544432 ZMYM4Q5VZL5 1548 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms