RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 CCNB3Q8WWL7 1395 aa17.57■□□□□ 0.4
SMG8-202ENST00000543872 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
SMG8-202ENST00000543872 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
SMG8-202ENST00000543872 NOP58Q9Y2X3 529 aaKnown RBP17.55■□□□□ 0.4
SMG8-202ENST00000543872 RTN4Q9NQC3 1192 aaKnown RBP17.55■□□□□ 0.4
SMG8-202ENST00000543872 PPP4R2Q9NY27 417 aa17.53■□□□□ 0.4
SMG8-202ENST00000543872 FAM50AQ14320 339 aaKnown RBP17.51■□□□□ 0.39
SMG8-202ENST00000543872 BAZ1BQ9UIG0 1483 aaKnown RBP17.5■□□□□ 0.39
SMG8-202ENST00000543872 RRBP1Q9P2E9 1410 aaKnown RBP17.5■□□□□ 0.39
SMG8-202ENST00000543872 RTL5Q5HYW3 569 aaPredicted RBP17.49■□□□□ 0.39
SMG8-202ENST00000543872 ERICH6BQ5W0A0 696 aa17.48■□□□□ 0.39
SMG8-202ENST00000543872 MAPKBP1O60336 1514 aa17.47■□□□□ 0.39
SMG8-202ENST00000543872 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
SMG8-202ENST00000543872 IL27Q8NEV9 243 aa17.45■□□□□ 0.38
SMG8-202ENST00000543872 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
SMG8-202ENST00000543872 SMARCA4P51532 1647 aa17.42■□□□□ 0.38
SMG8-202ENST00000543872 SETD5Q9C0A6 1442 aa17.42■□□□□ 0.38
SMG8-202ENST00000543872 CUX2O14529 1486 aa17.41■□□□□ 0.38
SMG8-202ENST00000543872 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
SMG8-202ENST00000543872 ATP1B4Q9UN42 357 aaPredicted RBP17.39■□□□□ 0.37
SMG8-202ENST00000543872 ANP32AP39687 249 aaKnown RBP17.37■□□□□ 0.37
SMG8-202ENST00000543872 ZBTB47Q9UFB7 747 aaPredicted RBP17.37■□□□□ 0.37
SMG8-202ENST00000543872 CCDC184Q52MB2 194 aa17.34■□□□□ 0.37
SMG8-202ENST00000543872 TONSLQ96HA7 1378 aa17.34■□□□□ 0.37
SMG8-202ENST00000543872 EIF5BO60841 1220 aaKnown RBP17.33■□□□□ 0.36
SMG8-202ENST00000543872 TIMELESSQ9UNS1 1208 aa17.32■□□□□ 0.36
SMG8-202ENST00000543872 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
SMG8-202ENST00000543872 IPO9Q96P70 1041 aaKnown RBP17.31■□□□□ 0.36
SMG8-202ENST00000543872 NPM2Q86SE8 214 aaKnown RBP17.3■□□□□ 0.36
SMG8-202ENST00000543872 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
SMG8-202ENST00000543872 SENP3-EIF4A1A0A087X0R7 540 aa17.28■□□□□ 0.36
SMG8-202ENST00000543872 PKNOX2Q96KN3 472 aa17.27■□□□□ 0.35
SMG8-202ENST00000543872 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
SMG8-202ENST00000543872 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
SMG8-202ENST00000543872 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
SMG8-202ENST00000543872 PHLDB1Q86UU1 1377 aa17.21■□□□□ 0.35
SMG8-202ENST00000543872 NEFMP07197 916 aa17.2■□□□□ 0.34
SMG8-202ENST00000543872 HSPA5P11021 654 aaKnown RBP17.19■□□□□ 0.34
SMG8-202ENST00000543872 PRXQ9BXM0 1461 aa17.19■□□□□ 0.34
SMG8-202ENST00000543872 WASHC2AQ641Q2 1341 aa17.19■□□□□ 0.34
SMG8-202ENST00000543872 ARHGAP35Q9NRY4 1499 aa17.17■□□□□ 0.34
SMG8-202ENST00000543872 ZBED9Q6R2W3 1325 aa17.13■□□□□ 0.33
SMG8-202ENST00000543872 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
SMG8-202ENST00000543872 ERICH3Q5RHP9 1530 aa17.12■□□□□ 0.33
SMG8-202ENST00000543872 PRKRIP1Q9H875 184 aaPredicted RBP17.12■□□□□ 0.33
SMG8-202ENST00000543872 AKNAQ7Z591 1439 aa17.11■□□□□ 0.33
SMG8-202ENST00000543872 BRPF3Q9ULD4 1205 aa17.1■□□□□ 0.33
SMG8-202ENST00000543872 EIF4G2P78344 907 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMG8-202ENST00000543872 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
SMG8-202ENST00000543872 C11orf95C9JLR9 678 aaPredicted RBP17.06■□□□□ 0.32
SMG8-202ENST00000543872 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
SMG8-202ENST00000543872 KIF27Q86VH2 1401 aa17.05■□□□□ 0.32
SMG8-202ENST00000543872 TOP2BQ02880 1626 aa17.03■□□□□ 0.32
SMG8-202ENST00000543872 TIAM1Q13009 1591 aa17.03■□□□□ 0.32
SMG8-202ENST00000543872 FHAD1B1AJZ9 1412 aa17.02■□□□□ 0.31
SMG8-202ENST00000543872 NUDCQ9Y266 331 aa17.01■□□□□ 0.31
SMG8-202ENST00000543872 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
SMG8-202ENST00000543872 CNTLNQ9NXG0 1405 aa17■□□□□ 0.31
SMG8-202ENST00000543872 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
SMG8-202ENST00000543872 PDE4AP27815 886 aa16.98■□□□□ 0.31
SMG8-202ENST00000543872 USP35Q9P2H5 1018 aa16.98■□□□□ 0.31
SMG8-202ENST00000543872 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
SMG8-202ENST00000543872 PODXL2Q9NZ53 605 aa16.96■□□□□ 0.31
SMG8-202ENST00000543872 RRP7BPQ9NSQ0 103 aa16.95■□□□□ 0.3
SMG8-202ENST00000543872 CHIC2Q9UKJ5 165 aa16.95■□□□□ 0.3
SMG8-202ENST00000543872 SLC24A1O60721 1099 aa16.94■□□□□ 0.3
SMG8-202ENST00000543872 WASHC2CQ9Y4E1 1318 aa16.94■□□□□ 0.3
SMG8-202ENST00000543872 CCDC7Q96M83 1385 aa16.93■□□□□ 0.3
SMG8-202ENST00000543872 SLC4A3P48751 1232 aa16.93■□□□□ 0.3
SMG8-202ENST00000543872 GSE1Q14687 1217 aa16.93■□□□□ 0.3
SMG8-202ENST00000543872 EXOC6Q8TAG9 804 aa16.93■□□□□ 0.3
SMG8-202ENST00000543872 SMG6Q86US8 1419 aaKnown RBP16.92■□□□□ 0.3
SMG8-202ENST00000543872 FOXD1Q16676 465 aa16.92■□□□□ 0.3
SMG8-202ENST00000543872 L3MBTL2Q969R5 705 aa16.91■□□□□ 0.3
SMG8-202ENST00000543872 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
SMG8-202ENST00000543872 TCERG1O14776 1098 aaKnown RBP16.9■□□□□ 0.3
SMG8-202ENST00000543872 ATAD2BQ9ULI0 1458 aa16.9■□□□□ 0.3
SMG8-202ENST00000543872 SKAP1Q86WV1 359 aa16.89■□□□□ 0.29
SMG8-202ENST00000543872 FRAT1Q92837 279 aaPredicted RBP16.89■□□□□ 0.29
SMG8-202ENST00000543872 AQRO60306 1485 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMG8-202ENST00000543872 DAXXQ9UER7 740 aaPredicted RBP16.88■□□□□ 0.29
SMG8-202ENST00000543872 BACH2Q9BYV9 841 aa16.88■□□□□ 0.29
SMG8-202ENST00000543872 MAP3K1Q13233 1512 aa16.87■□□□□ 0.29
SMG8-202ENST00000543872 NFKBIBQ15653 356 aa16.87■□□□□ 0.29
SMG8-202ENST00000543872 KIF7Q2M1P5 1343 aa16.86■□□□□ 0.29
SMG8-202ENST00000543872 RNF123Q5XPI4 1314 aa16.86■□□□□ 0.29
SMG8-202ENST00000543872 PTPRKQ15262 1439 aa16.86■□□□□ 0.29
SMG8-202ENST00000543872 TMC1Q8TDI8 760 aa16.85■□□□□ 0.29
SMG8-202ENST00000543872 BIVM-ERCC5R4GMW8 1640 aa16.84■□□□□ 0.29
SMG8-202ENST00000543872 NCOA2Q15596 1464 aa16.84■□□□□ 0.29
SMG8-202ENST00000543872 IGF1RP08069 1367 aa16.84■□□□□ 0.29
SMG8-202ENST00000543872 ZMYND15Q9H091 742 aa16.84■□□□□ 0.29
SMG8-202ENST00000543872 CUX1P39880 1505 aa16.83■□□□□ 0.29
SMG8-202ENST00000543872 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.29
SMG8-202ENST00000543872 VSIG10Q8N0Z9 540 aa16.83■□□□□ 0.28
SMG8-202ENST00000543872 FHOD3Q2V2M9 1422 aa16.82■□□□□ 0.28
SMG8-202ENST00000543872 NBPF8Q3BBV2 869 aa16.82■□□□□ 0.28
SMG8-202ENST00000543872 FGD6Q6ZV73 1430 aa16.82■□□□□ 0.28
SMG8-202ENST00000543872 NCOA1Q15788 1441 aa16.81■□□□□ 0.28
SMG8-202ENST00000543872 KDM5BQ9UGL1 1544 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms