RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 URB2Q14146 1524 aaKnown RBP16.03■□□□□ 0.16
CALU-206ENST00000542996 DENND4BO75064 1496 aaPredicted RBP16.02■□□□□ 0.16
CALU-206ENST00000542996 MAGI3Q5TCQ9 1506 aa16.01■□□□□ 0.15
CALU-206ENST00000542996 KDM5BQ9UGL1 1544 aa15.99■□□□□ 0.15
CALU-206ENST00000542996 FHOD3Q2V2M9 1422 aa15.98■□□□□ 0.15
CALU-206ENST00000542996 AQRO60306 1485 aaKnown RBP eCLIP15.98■□□□□ 0.157e-9■■■■□ 24
CALU-206ENST00000542996 FANCD2Q9BXW9 1451 aa15.98■□□□□ 0.15
CALU-206ENST00000542996 LRRC9Q6ZRR7 1453 aa15.98■□□□□ 0.15
CALU-206ENST00000542996 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
CALU-206ENST00000542996 RAB3GAP2Q9H2M9 1393 aa15.98■□□□□ 0.15
CALU-206ENST00000542996 SIN3AQ96ST3 1273 aa15.97■□□□□ 0.15
CALU-206ENST00000542996 CARMIL1Q5VZK9 1371 aa15.97■□□□□ 0.15
CALU-206ENST00000542996 CFAP43Q8NDM7 1665 aa15.97■□□□□ 0.15
CALU-206ENST00000542996 ITGAEP38570 1179 aa15.96■□□□□ 0.15
CALU-206ENST00000542996 KDM6BO15054 1643 aa15.95■□□□□ 0.14
CALU-206ENST00000542996 CCNB3Q8WWL7 1395 aa15.95■□□□□ 0.14
CALU-206ENST00000542996 SNAPC4Q5SXM2 1469 aa15.95■□□□□ 0.14
CALU-206ENST00000542996 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
CALU-206ENST00000542996 HIRIP3Q9BW71 556 aaPredicted RBP15.92■□□□□ 0.14
CALU-206ENST00000542996 ABCA10Q8WWZ4 1543 aa15.9■□□□□ 0.14
CALU-206ENST00000542996 ABCA5Q8WWZ7 1642 aa15.88■□□□□ 0.13
CALU-206ENST00000542996 DNMBPQ6XZF7 1577 aa15.87■□□□□ 0.13
CALU-206ENST00000542996 CTTNBP2Q8WZ74 1663 aa15.86■□□□□ 0.13
CALU-206ENST00000542996 TDRD9Q8NDG6 1382 aaKnown RBP15.86■□□□□ 0.13
CALU-206ENST00000542996 TARBP1Q13395 1621 aaKnown RBP15.84■□□□□ 0.13
CALU-206ENST00000542996 SAMD9Q5K651 1589 aa15.83■□□□□ 0.12
CALU-206ENST00000542996 MAP3K1Q13233 1512 aa15.82■□□□□ 0.12
CALU-206ENST00000542996 LAMC3Q9Y6N6 1575 aa15.77■□□□□ 0.11
CALU-206ENST00000542996 GRIN2BQ13224 1484 aa15.74■□□□□ 0.11
CALU-206ENST00000542996 ARHGEF11O15085 1522 aa15.73■□□□□ 0.11
CALU-206ENST00000542996 PPP1R15AO75807 674 aaPredicted RBP15.71■□□□□ 0.11
CALU-206ENST00000542996 SETD5Q9C0A6 1442 aa15.71■□□□□ 0.1
CALU-206ENST00000542996 CASKIN1Q8WXD9 1431 aa15.7■□□□□ 0.1
CALU-206ENST00000542996 ZNF608Q9ULD9 1512 aaPredicted RBP15.7■□□□□ 0.1
CALU-206ENST00000542996 FYCO1Q9BQS8 1478 aa15.67■□□□□ 0.1
CALU-206ENST00000542996 PTPN23Q9H3S7 1636 aa15.67■□□□□ 0.1
CALU-206ENST00000542996 CUL7Q14999 1698 aa15.67■□□□□ 0.1
CALU-206ENST00000542996 NAIPQ13075 1403 aa15.66■□□□□ 0.1
CALU-206ENST00000542996 CDK13Q14004 1512 aaKnown RBP15.66■□□□□ 0.1
CALU-206ENST00000542996 FGD6Q6ZV73 1430 aa15.65■□□□□ 0.1
CALU-206ENST00000542996 CLSPNQ9HAW4 1339 aa15.65■□□□□ 0.1
CALU-206ENST00000542996 SUPT16HQ9Y5B9 1047 aaKnown RBP15.65■□□□□ 0.1
CALU-206ENST00000542996 APLP2Q06481 763 aa15.64■□□□□ 0.09
CALU-206ENST00000542996 PBRM1Q86U86 1689 aa15.64■□□□□ 0.09
CALU-206ENST00000542996 C11orf95C9JLR9 678 aaPredicted RBP15.64■□□□□ 0.09
CALU-206ENST00000542996 FAM50AQ14320 339 aaKnown RBP15.62■□□□□ 0.09
CALU-206ENST00000542996 CCDC184Q52MB2 194 aa15.62■□□□□ 0.09
CALU-206ENST00000542996 GAPVD1Q14C86 1478 aa15.61■□□□□ 0.09
CALU-206ENST00000542996 NCOA2Q15596 1464 aa15.61■□□□□ 0.09
CALU-206ENST00000542996 FOXD1Q16676 465 aa15.6■□□□□ 0.09
CALU-206ENST00000542996 THOC2Q8NI27 1593 aaKnown RBP15.6■□□□□ 0.09
CALU-206ENST00000542996 UGGT2Q9NYU1 1516 aa15.6■□□□□ 0.09
CALU-206ENST00000542996 ARID3CA6NKF2 412 aa15.59■□□□□ 0.09
CALU-206ENST00000542996 DDX10Q13206 875 aaKnown RBP15.59■□□□□ 0.09
CALU-206ENST00000542996 ZNF644Q9H582 1327 aaPredicted RBP15.58■□□□□ 0.08
CALU-206ENST00000542996 EFCAB5A4FU69 1503 aa15.57■□□□□ 0.08
CALU-206ENST00000542996 SUPT6HQ7KZ85 1726 aaKnown RBP15.57■□□□□ 0.08
CALU-206ENST00000542996 ATP1B4Q9UN42 357 aaPredicted RBP15.57■□□□□ 0.08
CALU-206ENST00000542996 PDS5BQ9NTI5 1447 aa15.55■□□□□ 0.08
CALU-206ENST00000542996 DISP1Q96F81 1524 aa15.55■□□□□ 0.08
CALU-206ENST00000542996 HFM1A2PYH4 1435 aa15.54■□□□□ 0.08
CALU-206ENST00000542996 CCDC18Q5T9S5 1454 aa15.54■□□□□ 0.08
CALU-206ENST00000542996 ADAMTS12P58397 1594 aa15.52■□□□□ 0.07
CALU-206ENST00000542996 FHAD1B1AJZ9 1412 aa15.51■□□□□ 0.07
CALU-206ENST00000542996 CENPBP07199 599 aaPredicted RBP15.5■□□□□ 0.07
CALU-206ENST00000542996 WDR62O43379 1518 aa15.5■□□□□ 0.07
CALU-206ENST00000542996 MYOM3Q5VTT5 1437 aa15.48■□□□□ 0.07
CALU-206ENST00000542996 CHIC2Q9UKJ5 165 aa15.48■□□□□ 0.07
CALU-206ENST00000542996 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.47■□□□□ 0.073e-26■■□□□ 13.1
CALU-206ENST00000542996 EPRSP07814 1512 aaKnown RBP15.47■□□□□ 0.07
CALU-206ENST00000542996 GCC2Q8IWJ2 1684 aa15.47■□□□□ 0.07
CALU-206ENST00000542996 RRP7BPQ9NSQ0 103 aa15.46■□□□□ 0.07
CALU-206ENST00000542996 WASHC2AQ641Q2 1341 aa15.45■□□□□ 0.06
CALU-206ENST00000542996 TSHZ2Q9NRE2 1034 aa15.45■□□□□ 0.06
CALU-206ENST00000542996 NUP153P49790 1475 aaKnown RBP15.45■□□□□ 0.06
CALU-206ENST00000542996 NBPF8Q3BBV2 869 aa15.45■□□□□ 0.06
CALU-206ENST00000542996 TCOF1Q13428 1488 aaKnown RBP15.45■□□□□ 0.06
CALU-206ENST00000542996 KIF14Q15058 1648 aa15.44■□□□□ 0.06
CALU-206ENST00000542996 UACAQ9BZF9 1416 aa15.43■□□□□ 0.06
CALU-206ENST00000542996 BCORL1Q5H9F3 1711 aa15.43■□□□□ 0.06
CALU-206ENST00000542996 IQGAP2Q13576 1575 aa15.41■□□□□ 0.06
CALU-206ENST00000542996 TRIM52Q96A61 297 aa15.41■□□□□ 0.06
CALU-206ENST00000542996 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
CALU-206ENST00000542996 FMN1Q68DA7 1419 aa15.4■□□□□ 0.06
CALU-206ENST00000542996 HECW1Q76N89 1606 aa15.39■□□□□ 0.05
CALU-206ENST00000542996 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
CALU-206ENST00000542996 PLB1Q6P1J6 1458 aa15.37■□□□□ 0.05
CALU-206ENST00000542996 TEX14Q8IWB6 1497 aa15.37■□□□□ 0.05
CALU-206ENST00000542996 KIAA0556O60303 1618 aa15.36■□□□□ 0.05
CALU-206ENST00000542996 EHBP1L1Q8N3D4 1523 aa15.36■□□□□ 0.05
CALU-206ENST00000542996 ABCC5O15440 1437 aa15.36■□□□□ 0.05
CALU-206ENST00000542996 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
CALU-206ENST00000542996 BCANQ96GW7 911 aa15.35■□□□□ 0.05
CALU-206ENST00000542996 SPATA31E1Q6ZUB1 1445 aa15.35■□□□□ 0.05
CALU-206ENST00000542996 PRG4Q92954 1404 aaPredicted RBP15.35■□□□□ 0.05
CALU-206ENST00000542996 PZPP20742 1482 aa15.33■□□□□ 0.04
CALU-206ENST00000542996 SENP3-EIF4A1A0A087X0R7 540 aa15.32■□□□□ 0.04
CALU-206ENST00000542996 L3MBTL2Q969R5 705 aa15.3■□□□□ 0.04
CALU-206ENST00000542996 ANKRD30BQ9BXX2 1392 aa15.29■□□□□ 0.04
CALU-206ENST00000542996 DNMT1P26358 1616 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms