RNA–Protein interactions for RNA: ENST00000542793.1

SLC3A2-219, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-219ENST00000542793 WDR97A6NE52 1622 aa13.35□□□□□ -0.27
SLC3A2-219ENST00000542793 LOC105371045A0A1W2PR82 267 aa13.34□□□□□ -0.27
SLC3A2-219ENST00000542793 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
SLC3A2-219ENST00000542793 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
SLC3A2-219ENST00000542793 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
SLC3A2-219ENST00000542793 CLASP1Q7Z460 1538 aa13.29□□□□□ -0.28
SLC3A2-219ENST00000542793 TRHP20396 242 aaPredicted RBP13.29□□□□□ -0.28
SLC3A2-219ENST00000542793 CHMP7Q8WUX9 453 aaPredicted RBP13.29□□□□□ -0.28
SLC3A2-219ENST00000542793 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
SLC3A2-219ENST00000542793 MAGI1Q96QZ7 1491 aaPredicted RBP13.29□□□□□ -0.28
SLC3A2-219ENST00000542793 KIF27Q86VH2 1401 aa13.25□□□□□ -0.29
SLC3A2-219ENST00000542793 ABCA10Q8WWZ4 1543 aa13.24□□□□□ -0.29
SLC3A2-219ENST00000542793 SYNJ2O15056 1496 aa13.24□□□□□ -0.29
SLC3A2-219ENST00000542793 GAPVD1Q14C86 1478 aa13.23□□□□□ -0.29
SLC3A2-219ENST00000542793 ABCA5Q8WWZ7 1642 aa13.22□□□□□ -0.29
SLC3A2-219ENST00000542793 IGF1RP08069 1367 aa13.21□□□□□ -0.29
SLC3A2-219ENST00000542793 PRXQ9BXM0 1461 aa13.21□□□□□ -0.3
SLC3A2-219ENST00000542793 KIF21BO75037 1637 aa13.17□□□□□ -0.3
SLC3A2-219ENST00000542793 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
SLC3A2-219ENST00000542793 TNIKQ9UKE5 1360 aa13.15□□□□□ -0.3
SLC3A2-219ENST00000542793 GOLGA3Q08378 1498 aa13.15□□□□□ -0.3
SLC3A2-219ENST00000542793 SLC4A1APQ9BWU0 796 aaKnown RBP13.14□□□□□ -0.31
SLC3A2-219ENST00000542793 ADAMTS12P58397 1594 aa13.14□□□□□ -0.31
SLC3A2-219ENST00000542793 RAPGEF2Q9Y4G8 1499 aa13.13□□□□□ -0.31
SLC3A2-219ENST00000542793 GRIN2AQ12879 1464 aa13.12□□□□□ -0.31
SLC3A2-219ENST00000542793 ERICH3Q5RHP9 1530 aa13.12□□□□□ -0.31
SLC3A2-219ENST00000542793 CEP170Q5SW79 1584 aa13.1□□□□□ -0.31
SLC3A2-219ENST00000542793 CARMIL1Q5VZK9 1371 aa13.08□□□□□ -0.31
SLC3A2-219ENST00000542793 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
SLC3A2-219ENST00000542793 FHAD1B1AJZ9 1412 aa13.05□□□□□ -0.32
SLC3A2-219ENST00000542793 NUP160Q12769 1436 aa13.05□□□□□ -0.32
SLC3A2-219ENST00000542793 SHROOM2Q13796 1616 aa13.04□□□□□ -0.32
SLC3A2-219ENST00000542793 DCAF8L1A6NGE4 600 aa13.04□□□□□ -0.32
SLC3A2-219ENST00000542793 UBTFP17480 764 aaKnown RBP13.04□□□□□ -0.32
SLC3A2-219ENST00000542793 CEP162Q5TB80 1403 aa13.02□□□□□ -0.33
SLC3A2-219ENST00000542793 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
SLC3A2-219ENST00000542793 CUL7Q14999 1698 aa13□□□□□ -0.33
SLC3A2-219ENST00000542793 PRG4Q92954 1404 aaPredicted RBP12.95□□□□□ -0.34
SLC3A2-219ENST00000542793 CLIP1P30622 1438 aa12.94□□□□□ -0.34
SLC3A2-219ENST00000542793 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
SLC3A2-219ENST00000542793 ARHGAP35Q9NRY4 1499 aa12.86□□□□□ -0.35
SLC3A2-219ENST00000542793 NPM1P06748 294 aaKnown RBP eCLIP12.85□□□□□ -0.35
SLC3A2-219ENST00000542793 ADCY10Q96PN6 1610 aa12.84□□□□□ -0.35
SLC3A2-219ENST00000542793 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.36
SLC3A2-219ENST00000542793 KIAA0586Q9BVV6 1533 aa12.83□□□□□ -0.36
SLC3A2-219ENST00000542793 DIP2BQ9P265 1576 aa12.81□□□□□ -0.36
SLC3A2-219ENST00000542793 SLC4A2P04920 1241 aa12.81□□□□□ -0.36
SLC3A2-219ENST00000542793 MAPKBP1O60336 1514 aa12.81□□□□□ -0.36
SLC3A2-219ENST00000542793 TTBK1Q5TCY1 1321 aaPredicted RBP12.81□□□□□ -0.36
SLC3A2-219ENST00000542793 TSPOAP1O95153 1857 aa12.8□□□□□ -0.36
SLC3A2-219ENST00000542793 FAM69CQ0P6D2 419 aa12.8□□□□□ -0.36
SLC3A2-219ENST00000542793 CTTNBP2Q8WZ74 1663 aa12.8□□□□□ -0.36
SLC3A2-219ENST00000542793 ABCC10Q5T3U5 1492 aa12.79□□□□□ -0.36
SLC3A2-219ENST00000542793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.79□□□□□ -0.36
SLC3A2-219ENST00000542793 EFCAB5A4FU69 1503 aa12.78□□□□□ -0.36
SLC3A2-219ENST00000542793 RANGAP1P46060 587 aaPredicted RBP12.77□□□□□ -0.37
SLC3A2-219ENST00000542793 UGGT2Q9NYU1 1516 aa12.76□□□□□ -0.37
SLC3A2-219ENST00000542793 SAMD9Q5K651 1589 aa12.76□□□□□ -0.37
SLC3A2-219ENST00000542793 KDM6BO15054 1643 aa12.76□□□□□ -0.37
SLC3A2-219ENST00000542793 IQGAP2Q13576 1575 aa12.75□□□□□ -0.37
SLC3A2-219ENST00000542793 FOXD4L1Q9NU39 408 aa12.74□□□□□ -0.37
SLC3A2-219ENST00000542793 PTPRGP23470 1445 aa12.73□□□□□ -0.37
SLC3A2-219ENST00000542793 CARMIL2Q6F5E8 1435 aa12.73□□□□□ -0.37
SLC3A2-219ENST00000542793 PPRC1Q5VV67 1664 aaKnown RBP12.72□□□□□ -0.37
SLC3A2-219ENST00000542793 FHOD3Q2V2M9 1422 aa12.71□□□□□ -0.37
SLC3A2-219ENST00000542793 DISP1Q96F81 1524 aa12.7□□□□□ -0.38
SLC3A2-219ENST00000542793 P3H3Q8IVL6 736 aa12.68□□□□□ -0.38
SLC3A2-219ENST00000542793 ABCC2Q92887 1545 aa12.67□□□□□ -0.38
SLC3A2-219ENST00000542793 FMN1Q68DA7 1419 aa12.67□□□□□ -0.38
SLC3A2-219ENST00000542793 CASKIN1Q8WXD9 1431 aa12.67□□□□□ -0.38
SLC3A2-219ENST00000542793 MAP3K1Q13233 1512 aa12.67□□□□□ -0.38
SLC3A2-219ENST00000542793 ASXL2Q76L83 1435 aa12.65□□□□□ -0.38
SLC3A2-219ENST00000542793 KDM4FA0A1W2PPD8 638 aa12.65□□□□□ -0.38
SLC3A2-219ENST00000542793 ZBTB22O15209 634 aa12.65□□□□□ -0.38
SLC3A2-219ENST00000542793 TRIM26Q12899 539 aaPredicted RBP12.65□□□□□ -0.38
SLC3A2-219ENST00000542793 RNF39Q9H2S5 420 aa12.65□□□□□ -0.38
SLC3A2-219ENST00000542793 UACAQ9BZF9 1416 aa12.63□□□□□ -0.39
SLC3A2-219ENST00000542793 KIAA0556O60303 1618 aa12.63□□□□□ -0.39
SLC3A2-219ENST00000542793 ZCCHC11Q5TAX3 1644 aaKnown RBP12.63□□□□□ -0.39
SLC3A2-219ENST00000542793 PPARGC1BQ86YN6 1023 aaKnown RBP12.63□□□□□ -0.39
SLC3A2-219ENST00000542793 PLB1Q6P1J6 1458 aa12.63□□□□□ -0.39
SLC3A2-219ENST00000542793 FYCO1Q9BQS8 1478 aa12.63□□□□□ -0.39
SLC3A2-219ENST00000542793 UHRF1BP1LA0JNW5 1464 aa12.62□□□□□ -0.39
SLC3A2-219ENST00000542793 KANK4Q5T7N3 995 aaPredicted RBP12.62□□□□□ -0.39
SLC3A2-219ENST00000542793 GLI2P10070 1586 aa12.61□□□□□ -0.39
SLC3A2-219ENST00000542793 PCF11O94913 1555 aaKnown RBP12.6□□□□□ -0.39
SLC3A2-219ENST00000542793 COL17A1Q9UMD9 1497 aaPredicted RBP12.6□□□□□ -0.39
SLC3A2-219ENST00000542793 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
SLC3A2-219ENST00000542793 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
SLC3A2-219ENST00000542793 APLP2Q06481 763 aa12.58□□□□□ -0.4
SLC3A2-219ENST00000542793 TIAM1Q13009 1591 aa12.58□□□□□ -0.4
SLC3A2-219ENST00000542793 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
SLC3A2-219ENST00000542793 MAP3K4Q9Y6R4 1608 aa12.58□□□□□ -0.4
SLC3A2-219ENST00000542793 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
SLC3A2-219ENST00000542793 EPRSP07814 1512 aaKnown RBP12.57□□□□□ -0.4
SLC3A2-219ENST00000542793 LRRC9Q6ZRR7 1453 aa12.55□□□□□ -0.4
SLC3A2-219ENST00000542793 TEX14Q8IWB6 1497 aa12.54□□□□□ -0.4
SLC3A2-219ENST00000542793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.54□□□□□ -0.4
SLC3A2-219ENST00000542793 C1QBPQ07021 282 aaKnown RBP12.54□□□□□ -0.4
SLC3A2-219ENST00000542793 HNRNPUL2Q1KMD3 747 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms