RNA–Protein interactions for RNA: ENST00000542754.6

AP4S1-204, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP4S1, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-204ENST00000542754 ZNF326Q5BKZ1 582 aaKnown RBP12.45□□□□□ -0.42
AP4S1-204ENST00000542754 SENP3Q9H4L4 574 aaPredicted RBP12.44□□□□□ -0.42
AP4S1-204ENST00000542754 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
AP4S1-204ENST00000542754 CDK11AQ9UQ88 783 aaPredicted RBP12.41□□□□□ -0.42
AP4S1-204ENST00000542754 POLA1P09884 1462 aaPredicted RBP12.41□□□□□ -0.42
AP4S1-204ENST00000542754 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
AP4S1-204ENST00000542754 JPH4Q96JJ6 628 aa12.39□□□□□ -0.43
AP4S1-204ENST00000542754 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
AP4S1-204ENST00000542754 HIRIP3Q9BW71 556 aaPredicted RBP12.39□□□□□ -0.43
AP4S1-204ENST00000542754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.38□□□□□ -0.43
AP4S1-204ENST00000542754 VPS8Q8N3P4 1428 aa12.36□□□□□ -0.43
AP4S1-204ENST00000542754 PLEKHD1A6NEE1 506 aa12.35□□□□□ -0.43
AP4S1-204ENST00000542754 NPM1P06748 294 aaKnown RBP eCLIP12.35□□□□□ -0.43
AP4S1-204ENST00000542754 URB2Q14146 1524 aaKnown RBP12.33□□□□□ -0.44
AP4S1-204ENST00000542754 TOP2BQ02880 1626 aa12.33□□□□□ -0.44
AP4S1-204ENST00000542754 ZNF608Q9ULD9 1512 aaPredicted RBP12.31□□□□□ -0.44
AP4S1-204ENST00000542754 CFDP1Q9UEE9 299 aaPredicted RBP12.31□□□□□ -0.44
AP4S1-204ENST00000542754 BIVM-ERCC5R4GMW8 1640 aa12.3□□□□□ -0.44
AP4S1-204ENST00000542754 SIN3AQ96ST3 1273 aa12.29□□□□□ -0.44
AP4S1-204ENST00000542754 FOXD1Q16676 465 aa12.27□□□□□ -0.44
AP4S1-204ENST00000542754 DIEXFQ68CQ4 756 aaKnown RBP12.27□□□□□ -0.45
AP4S1-204ENST00000542754 CYB5RLQ6IPT4 315 aa12.27□□□□□ -0.45
AP4S1-204ENST00000542754 MRC2Q9UBG0 1479 aa12.27□□□□□ -0.45
AP4S1-204ENST00000542754 ARAP1Q96P48 1450 aa12.26□□□□□ -0.45
AP4S1-204ENST00000542754 KIF21BO75037 1637 aa12.25□□□□□ -0.45
AP4S1-204ENST00000542754 PRDM2Q13029 1718 aa12.24□□□□□ -0.45
AP4S1-204ENST00000542754 TSPY4P0CV99 314 aa12.24□□□□□ -0.45
AP4S1-204ENST00000542754 TSPY10P0CW01 314 aa12.24□□□□□ -0.45
AP4S1-204ENST00000542754 PRXQ9BXM0 1461 aa12.23□□□□□ -0.45
AP4S1-204ENST00000542754 KDM2AQ9Y2K7 1162 aa12.22□□□□□ -0.45
AP4S1-204ENST00000542754 CCNB3Q8WWL7 1395 aa12.22□□□□□ -0.45
AP4S1-204ENST00000542754 ZNF644Q9H582 1327 aaPredicted RBP12.22□□□□□ -0.45
AP4S1-204ENST00000542754 FHAD1B1AJZ9 1412 aa12.21□□□□□ -0.45
AP4S1-204ENST00000542754 DNMBPQ6XZF7 1577 aa12.21□□□□□ -0.45
AP4S1-204ENST00000542754 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.45
AP4S1-204ENST00000542754 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.46
AP4S1-204ENST00000542754 ARHGAP35Q9NRY4 1499 aa12.2□□□□□ -0.46
AP4S1-204ENST00000542754 SNAPC4Q5SXM2 1469 aa12.2□□□□□ -0.46
AP4S1-204ENST00000542754 HNRNPMP52272 730 aaKnown RBP eCLIP12.19□□□□□ -0.46
AP4S1-204ENST00000542754 RGL3Q3MIN7 710 aa12.18□□□□□ -0.46
AP4S1-204ENST00000542754 SLC4A1APQ9BWU0 796 aaKnown RBP12.18□□□□□ -0.46
AP4S1-204ENST00000542754 GRIN2BQ13224 1484 aa12.17□□□□□ -0.46
AP4S1-204ENST00000542754 OSCARQ8IYS5 282 aa12.16□□□□□ -0.46
AP4S1-204ENST00000542754 FMN1Q68DA7 1419 aa12.15□□□□□ -0.47
AP4S1-204ENST00000542754 CARMIL2Q6F5E8 1435 aa12.15□□□□□ -0.47
AP4S1-204ENST00000542754 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
AP4S1-204ENST00000542754 ZNF316A6NFI3 1004 aaPredicted RBP12.14□□□□□ -0.47
AP4S1-204ENST00000542754 KIF21AQ7Z4S6 1674 aa12.14□□□□□ -0.47
AP4S1-204ENST00000542754 TRHP20396 242 aaPredicted RBP12.13□□□□□ -0.47
AP4S1-204ENST00000542754 PTPRGP23470 1445 aa12.13□□□□□ -0.47
AP4S1-204ENST00000542754 IFT140Q96RY7 1462 aa12.11□□□□□ -0.47
AP4S1-204ENST00000542754 PHLDB1Q86UU1 1377 aa12.11□□□□□ -0.47
AP4S1-204ENST00000542754 DDX10Q13206 875 aaKnown RBP12.11□□□□□ -0.47
AP4S1-204ENST00000542754 MLECQ14165 292 aa12.1□□□□□ -0.47
AP4S1-204ENST00000542754 TONSLQ96HA7 1378 aa12.1□□□□□ -0.47
AP4S1-204ENST00000542754 SENP3-EIF4A1A0A087X0R7 540 aa12.1□□□□□ -0.47
AP4S1-204ENST00000542754 PRG4Q92954 1404 aaPredicted RBP12.08□□□□□ -0.48
AP4S1-204ENST00000542754 RAB3GAP2Q9H2M9 1393 aa12.07□□□□□ -0.48
AP4S1-204ENST00000542754 BCANQ96GW7 911 aa12.07□□□□□ -0.48
AP4S1-204ENST00000542754 ERICH3Q5RHP9 1530 aa12.05□□□□□ -0.48
AP4S1-204ENST00000542754 GGT6Q6P531 493 aa12.04□□□□□ -0.48
AP4S1-204ENST00000542754 GTF3C3Q9Y5Q9 886 aa12.04□□□□□ -0.48
AP4S1-204ENST00000542754 PLB1Q6P1J6 1458 aa12.01□□□□□ -0.49
AP4S1-204ENST00000542754 ARID4BQ4LE39 1312 aaPredicted RBP12.01□□□□□ -0.49
AP4S1-204ENST00000542754 ACIN1Q9UKV3 1341 aaKnown RBP12.01□□□□□ -0.49
AP4S1-204ENST00000542754 CDK13Q14004 1512 aaKnown RBP12□□□□□ -0.49
AP4S1-204ENST00000542754 PKD2Q13563 968 aa11.99□□□□□ -0.49
AP4S1-204ENST00000542754 MIER1Q8N108 512 aa11.99□□□□□ -0.49
AP4S1-204ENST00000542754 ESF1Q9H501 851 aaKnown RBP11.99□□□□□ -0.49
AP4S1-204ENST00000542754 STAG3Q9UJ98 1225 aa11.99□□□□□ -0.49
AP4S1-204ENST00000542754 AFAP1Q8N556 730 aa11.98□□□□□ -0.49
AP4S1-204ENST00000542754 SETD5Q9C0A6 1442 aa11.98□□□□□ -0.49
AP4S1-204ENST00000542754 LRRC9Q6ZRR7 1453 aa11.98□□□□□ -0.49
AP4S1-204ENST00000542754 GRIN2AQ12879 1464 aa11.97□□□□□ -0.49
AP4S1-204ENST00000542754 ERICH6Q7L0X2 663 aa11.97□□□□□ -0.49
AP4S1-204ENST00000542754 NUTM2DQ5VT03 806 aaPredicted RBP11.96□□□□□ -0.49
AP4S1-204ENST00000542754 MPHOSPH9Q99550 1183 aa11.96□□□□□ -0.49
AP4S1-204ENST00000542754 EFCAB2Q5VUJ9 269 aa11.96□□□□□ -0.5
AP4S1-204ENST00000542754 KIF3BO15066 747 aa11.95□□□□□ -0.5
AP4S1-204ENST00000542754 SCAF1Q9H7N4 1312 aaKnown RBP11.94□□□□□ -0.5
AP4S1-204ENST00000542754 CASKIN1Q8WXD9 1431 aa11.94□□□□□ -0.5
AP4S1-204ENST00000542754 SYNJ2O15056 1496 aa11.93□□□□□ -0.5
AP4S1-204ENST00000542754 DCAF11Q8TEB1 546 aa11.93□□□□□ -0.5
AP4S1-204ENST00000542754 KIAA0586Q9BVV6 1533 aa11.93□□□□□ -0.5
AP4S1-204ENST00000542754 NCOA2Q15596 1464 aa11.93□□□□□ -0.5
AP4S1-204ENST00000542754 NUP155O75694 1391 aa11.93□□□□□ -0.5
AP4S1-204ENST00000542754 FAM69CQ0P6D2 419 aa11.92□□□□□ -0.5
AP4S1-204ENST00000542754 CCDC18Q5T9S5 1454 aa11.92□□□□□ -0.5
AP4S1-204ENST00000542754 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
AP4S1-204ENST00000542754 NEFLP07196 543 aa11.91□□□□□ -0.5
AP4S1-204ENST00000542754 PCF11O94913 1555 aaKnown RBP11.91□□□□□ -0.5
AP4S1-204ENST00000542754 DHX57Q6P158 1386 aaKnown RBP11.91□□□□□ -0.5
AP4S1-204ENST00000542754 FGD6Q6ZV73 1430 aa11.9□□□□□ -0.5
AP4S1-204ENST00000542754 IQGAP2Q13576 1575 aa11.9□□□□□ -0.5
AP4S1-204ENST00000542754 WDR97A6NE52 1622 aa11.9□□□□□ -0.5
AP4S1-204ENST00000542754 SALL2Q9Y467 1007 aaPredicted RBP11.89□□□□□ -0.51
AP4S1-204ENST00000542754 ANP32CO43423 234 aa11.88□□□□□ -0.51
AP4S1-204ENST00000542754 RAPGEF3O95398 923 aa11.88□□□□□ -0.51
AP4S1-204ENST00000542754 SPAG9O60271 1321 aaKnown RBP11.88□□□□□ -0.51
AP4S1-204ENST00000542754 L3MBTL2Q969R5 705 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms