RNA–Protein interactions for RNA: ENST00000542754.6

AP4S1-204, Transcript of adaptor related protein complex 4 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP4S1, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1-204ENST00000542754 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
AP4S1-204ENST00000542754 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
AP4S1-204ENST00000542754 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
AP4S1-204ENST00000542754 SUPT5HO00267 1087 aaKnown RBP15.26■□□□□ 0.03
AP4S1-204ENST00000542754 ABCC9O60706 1549 aa14.84□□□□□ -0.03
AP4S1-204ENST00000542754 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
AP4S1-204ENST00000542754 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
AP4S1-204ENST00000542754 CCDC180Q9P1Z9 1646 aa14.47□□□□□ -0.09
AP4S1-204ENST00000542754 FAM9AQ8IZU1 332 aaPredicted RBP14.33□□□□□ -0.12
AP4S1-204ENST00000542754 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
AP4S1-204ENST00000542754 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
AP4S1-204ENST00000542754 RANGAP1P46060 587 aaPredicted RBP14□□□□□ -0.17
AP4S1-204ENST00000542754 TRIM41Q8WV44 630 aa14□□□□□ -0.17
AP4S1-204ENST00000542754 TTBK1Q5TCY1 1321 aaPredicted RBP13.94□□□□□ -0.18
AP4S1-204ENST00000542754 CHIC1Q5VXU3 224 aa13.91□□□□□ -0.18
AP4S1-204ENST00000542754 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.18
AP4S1-204ENST00000542754 DCAF1Q9Y4B6 1507 aa13.88□□□□□ -0.19
AP4S1-204ENST00000542754 PPARGC1BQ86YN6 1023 aaKnown RBP13.79□□□□□ -0.2
AP4S1-204ENST00000542754 CECR2Q9BXF3 1484 aa13.72□□□□□ -0.21
AP4S1-204ENST00000542754 RB1CC1Q8TDY2 1594 aa13.72□□□□□ -0.21
AP4S1-204ENST00000542754 NACADO15069 1562 aa13.67□□□□□ -0.22
AP4S1-204ENST00000542754 UBTFP17480 764 aaKnown RBP13.66□□□□□ -0.22
AP4S1-204ENST00000542754 RSF1Q96T23 1441 aaPredicted RBP13.61□□□□□ -0.23
AP4S1-204ENST00000542754 PCGF6Q9BYE7 350 aa13.61□□□□□ -0.23
AP4S1-204ENST00000542754 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
AP4S1-204ENST00000542754 ATP1B4Q9UN42 357 aaPredicted RBP13.53□□□□□ -0.24
AP4S1-204ENST00000542754 MROH2BQ7Z745 1585 aa13.47□□□□□ -0.25
AP4S1-204ENST00000542754 APLP2Q06481 763 aa13.37□□□□□ -0.27
AP4S1-204ENST00000542754 WIZO95785 1651 aa13.31□□□□□ -0.28
AP4S1-204ENST00000542754 BAZ1AQ9NRL2 1556 aaPredicted RBP13.25□□□□□ -0.29
AP4S1-204ENST00000542754 FBLN2P98095 1184 aa13.25□□□□□ -0.29
AP4S1-204ENST00000542754 BAZ1BQ9UIG0 1483 aaKnown RBP13.25□□□□□ -0.29
AP4S1-204ENST00000542754 P3H3Q8IVL6 736 aa13.24□□□□□ -0.29
AP4S1-204ENST00000542754 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
AP4S1-204ENST00000542754 ITGAEP38570 1179 aa13.2□□□□□ -0.3
AP4S1-204ENST00000542754 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
AP4S1-204ENST00000542754 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
AP4S1-204ENST00000542754 UNC13AQ9UPW8 1703 aa13.17□□□□□ -0.3
AP4S1-204ENST00000542754 CCDC88BA6NC98 1476 aa13.17□□□□□ -0.3
AP4S1-204ENST00000542754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
AP4S1-204ENST00000542754 HNRNPUL2Q1KMD3 747 aaKnown RBP13.13□□□□□ -0.31
AP4S1-204ENST00000542754 ABCC8Q09428 1581 aa13.12□□□□□ -0.31
AP4S1-204ENST00000542754 ATAD2BQ9ULI0 1458 aa13.08□□□□□ -0.32
AP4S1-204ENST00000542754 SMARCA4P51532 1647 aa13.07□□□□□ -0.32
AP4S1-204ENST00000542754 BICRAQ9NZM4 1560 aa13.04□□□□□ -0.32
AP4S1-204ENST00000542754 CCER1Q8TC90 406 aaPredicted RBP13.04□□□□□ -0.32
AP4S1-204ENST00000542754 SOGA1O94964 1423 aa13.03□□□□□ -0.32
AP4S1-204ENST00000542754 WRNQ14191 1432 aaPredicted RBP eCLIP13.03□□□□□ -0.32
AP4S1-204ENST00000542754 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.32
AP4S1-204ENST00000542754 PELP1Q8IZL8 1130 aaKnown RBP12.96□□□□□ -0.34
AP4S1-204ENST00000542754 EIF4G1Q04637 1599 aaKnown RBP12.96□□□□□ -0.34
AP4S1-204ENST00000542754 TOP2AP11388 1531 aaKnown RBP12.94□□□□□ -0.34
AP4S1-204ENST00000542754 SMARCA2P51531 1590 aa12.92□□□□□ -0.34
AP4S1-204ENST00000542754 RUSC2Q8N2Y8 1516 aa12.92□□□□□ -0.34
AP4S1-204ENST00000542754 FAM50AQ14320 339 aaKnown RBP12.86□□□□□ -0.35
AP4S1-204ENST00000542754 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
AP4S1-204ENST00000542754 NESP48681 1621 aa12.85□□□□□ -0.35
AP4S1-204ENST00000542754 HRCP23327 699 aa12.85□□□□□ -0.35
AP4S1-204ENST00000542754 CADPSQ9ULU8 1353 aa12.83□□□□□ -0.36
AP4S1-204ENST00000542754 ERCC6Q03468 1493 aa12.83□□□□□ -0.36
AP4S1-204ENST00000542754 CC2D2AQ9P2K1 1620 aa12.81□□□□□ -0.36
AP4S1-204ENST00000542754 CHMP7Q8WUX9 453 aaPredicted RBP12.8□□□□□ -0.36
AP4S1-204ENST00000542754 CUX2O14529 1486 aa12.78□□□□□ -0.36
AP4S1-204ENST00000542754 MYT1LQ9UL68 1186 aa12.77□□□□□ -0.37
AP4S1-204ENST00000542754 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
AP4S1-204ENST00000542754 CEP162Q5TB80 1403 aa12.74□□□□□ -0.37
AP4S1-204ENST00000542754 PEG3Q9GZU2 1588 aa12.73□□□□□ -0.37
AP4S1-204ENST00000542754 CLIP1P30622 1438 aa12.72□□□□□ -0.37
AP4S1-204ENST00000542754 KIF27Q86VH2 1401 aa12.72□□□□□ -0.37
AP4S1-204ENST00000542754 ZNF777Q9ULD5 760 aaPredicted RBP12.7□□□□□ -0.38
AP4S1-204ENST00000542754 FANCD2Q9BXW9 1451 aa12.7□□□□□ -0.38
AP4S1-204ENST00000542754 ZEB1P37275 1124 aaPredicted RBP12.69□□□□□ -0.38
AP4S1-204ENST00000542754 RAD54L2Q9Y4B4 1467 aa12.69□□□□□ -0.38
AP4S1-204ENST00000542754 CARMIL1Q5VZK9 1371 aa12.67□□□□□ -0.38
AP4S1-204ENST00000542754 PDS5BQ9NTI5 1447 aa12.66□□□□□ -0.38
AP4S1-204ENST00000542754 GOLGA3Q08378 1498 aa12.65□□□□□ -0.38
AP4S1-204ENST00000542754 MYT1Q01538 1121 aa12.65□□□□□ -0.38
AP4S1-204ENST00000542754 RAPGEF2Q9Y4G8 1499 aa12.64□□□□□ -0.39
AP4S1-204ENST00000542754 CHIC2Q9UKJ5 165 aa12.64□□□□□ -0.39
AP4S1-204ENST00000542754 NEUROD1Q13562 356 aa12.63□□□□□ -0.39
AP4S1-204ENST00000542754 CNGB1Q14028 1251 aaPredicted RBP12.61□□□□□ -0.39
AP4S1-204ENST00000542754 TNIKQ9UKE5 1360 aa12.61□□□□□ -0.39
AP4S1-204ENST00000542754 KANK4Q5T7N3 995 aaPredicted RBP12.6□□□□□ -0.39
AP4S1-204ENST00000542754 CEP164Q9UPV0 1460 aa12.6□□□□□ -0.39
AP4S1-204ENST00000542754 SYNJ1O43426 1573 aa12.6□□□□□ -0.39
AP4S1-204ENST00000542754 TRIM52Q96A61 297 aa12.59□□□□□ -0.39
AP4S1-204ENST00000542754 KCNH8Q96L42 1107 aa12.58□□□□□ -0.4
AP4S1-204ENST00000542754 FGD5Q6ZNL6 1462 aa12.58□□□□□ -0.4
AP4S1-204ENST00000542754 CFTRP13569 1480 aa12.57□□□□□ -0.4
AP4S1-204ENST00000542754 EEA1Q15075 1411 aa12.57□□□□□ -0.4
AP4S1-204ENST00000542754 AQRO60306 1485 aaKnown RBP eCLIP12.56□□□□□ -0.4
AP4S1-204ENST00000542754 CENPBP07199 599 aaPredicted RBP12.55□□□□□ -0.4
AP4S1-204ENST00000542754 IGF1RP08069 1367 aa12.52□□□□□ -0.41
AP4S1-204ENST00000542754 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
AP4S1-204ENST00000542754 CUX1P39880 1505 aa12.5□□□□□ -0.41
AP4S1-204ENST00000542754 POLR3GLQ9BT43 218 aa12.5□□□□□ -0.41
AP4S1-204ENST00000542754 HMGXB3Q12766 1538 aa12.49□□□□□ -0.41
AP4S1-204ENST00000542754 MTUS2Q5JR59 1369 aa12.48□□□□□ -0.41
AP4S1-204ENST00000542754 RRP7BPQ9NSQ0 103 aa12.47□□□□□ -0.41
AP4S1-204ENST00000542754 FHOD3Q2V2M9 1422 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms