RNA–Protein interactions for RNA: ENST00000541938.1

SAMD1-203, Transcript of sterile alpha motif domain containing 1, humanhuman

TSL 3

Gene SAMD1, Length 143 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-203ENST00000541938 SHROOM2Q13796 1616 aa32.91■■■□□ 2.86
SAMD1-203ENST00000541938 PRG4Q92954 1404 aaPredicted RBP32.86■■■□□ 2.85
SAMD1-203ENST00000541938 KIAA0586Q9BVV6 1533 aa32.83■■■□□ 2.85
SAMD1-203ENST00000541938 RAPGEF2Q9Y4G8 1499 aa32.74■■■□□ 2.83
SAMD1-203ENST00000541938 TRHP20396 242 aaPredicted RBP32.69■■■□□ 2.82
SAMD1-203ENST00000541938 IQGAP2Q13576 1575 aa32.56■■■□□ 2.8
SAMD1-203ENST00000541938 PRXQ9BXM0 1461 aa32.54■■■□□ 2.8
SAMD1-203ENST00000541938 CSRNP3Q8WYN3 585 aa32.54■■■□□ 2.8
SAMD1-203ENST00000541938 CHIC1Q5VXU3 224 aa32.51■■■□□ 2.79
SAMD1-203ENST00000541938 CARMIL2Q6F5E8 1435 aa32.5■■■□□ 2.79
SAMD1-203ENST00000541938 TTBK1Q5TCY1 1321 aaPredicted RBP32.47■■■□□ 2.79
SAMD1-203ENST00000541938 PTPRGP23470 1445 aa32.45■■■□□ 2.79
SAMD1-203ENST00000541938 TNIKQ9UKE5 1360 aa32.44■■■□□ 2.78
SAMD1-203ENST00000541938 EEA1Q15075 1411 aa32.43■■■□□ 2.78
SAMD1-203ENST00000541938 FAM9AQ8IZU1 332 aaPredicted RBP32.42■■■□□ 2.78
SAMD1-203ENST00000541938 DISP1Q96F81 1524 aa32.4■■■□□ 2.78
SAMD1-203ENST00000541938 UGGT2Q9NYU1 1516 aa32.4■■■□□ 2.78
SAMD1-203ENST00000541938 NPM1P06748 294 aaKnown RBP eCLIP32.39■■■□□ 2.78
SAMD1-203ENST00000541938 ADCY10Q96PN6 1610 aa32.33■■■□□ 2.77
SAMD1-203ENST00000541938 CTTNBP2Q8WZ74 1663 aa32.32■■■□□ 2.76
SAMD1-203ENST00000541938 KIAA0556O60303 1618 aa32.26■■■□□ 2.75
SAMD1-203ENST00000541938 GOLGA3Q08378 1498 aa32.21■■■□□ 2.75
SAMD1-203ENST00000541938 UACAQ9BZF9 1416 aa32.2■■■□□ 2.75
SAMD1-203ENST00000541938 MAPKBP1O60336 1514 aa32.17■■■□□ 2.74
SAMD1-203ENST00000541938 UHRF1BP1LA0JNW5 1464 aa32.16■■■□□ 2.74
SAMD1-203ENST00000541938 ABCC2Q92887 1545 aa32.14■■■□□ 2.74
SAMD1-203ENST00000541938 FAM69CQ0P6D2 419 aa32.13■■■□□ 2.73
SAMD1-203ENST00000541938 ABCC10Q5T3U5 1492 aa32.1■■■□□ 2.73
SAMD1-203ENST00000541938 P3H3Q8IVL6 736 aa32.1■■■□□ 2.73
SAMD1-203ENST00000541938 KIF21BO75037 1637 aa32.08■■■□□ 2.73
SAMD1-203ENST00000541938 KIF13AQ9H1H9 1805 aa32.06■■■□□ 2.72
SAMD1-203ENST00000541938 RANGAP1P46060 587 aaPredicted RBP32.04■■■□□ 2.72
SAMD1-203ENST00000541938 EHMT2Q96KQ7 1210 aa32.04■■■□□ 2.72
SAMD1-203ENST00000541938 PLB1Q6P1J6 1458 aa32.03■■■□□ 2.72
SAMD1-203ENST00000541938 KDM5BQ9UGL1 1544 aa32■■■□□ 2.71
SAMD1-203ENST00000541938 DIP2BQ9P265 1576 aa31.99■■■□□ 2.71
SAMD1-203ENST00000541938 ASXL2Q76L83 1435 aa31.99■■■□□ 2.71
SAMD1-203ENST00000541938 UBTFP17480 764 aaKnown RBP31.96■■■□□ 2.71
SAMD1-203ENST00000541938 ABCA8O94911 1581 aa31.94■■■□□ 2.7
SAMD1-203ENST00000541938 SAMD9Q5K651 1589 aa31.94■■■□□ 2.7
SAMD1-203ENST00000541938 ZCCHC11Q5TAX3 1644 aaKnown RBP31.89■■■□□ 2.7
SAMD1-203ENST00000541938 FHOD3Q2V2M9 1422 aa31.83■■■□□ 2.69
SAMD1-203ENST00000541938 ARID3CA6NKF2 412 aa31.82■■■□□ 2.68
SAMD1-203ENST00000541938 EPRSP07814 1512 aaKnown RBP31.79■■■□□ 2.68
SAMD1-203ENST00000541938 GLI2P10070 1586 aa31.78■■■□□ 2.68
SAMD1-203ENST00000541938 EFCAB5A4FU69 1503 aa31.75■■■□□ 2.67
SAMD1-203ENST00000541938 WDR7Q9Y4E6 1490 aa31.75■■■□□ 2.67
SAMD1-203ENST00000541938 TSPOAP1O95153 1857 aa31.75■■■□□ 2.67
SAMD1-203ENST00000541938 ATP10BO94823 1461 aa31.73■■■□□ 2.67
SAMD1-203ENST00000541938 KCNH8Q96L42 1107 aa31.73■■■□□ 2.67
SAMD1-203ENST00000541938 RAPGEF6Q8TEU7 1601 aa31.71■■■□□ 2.67
SAMD1-203ENST00000541938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.66■■■□□ 2.66
SAMD1-203ENST00000541938 HNRNPUL2Q1KMD3 747 aaKnown RBP31.66■■■□□ 2.66
SAMD1-203ENST00000541938 NUP153P49790 1475 aaKnown RBP31.62■■■□□ 2.65
SAMD1-203ENST00000541938 ARHGAP35Q9NRY4 1499 aa31.61■■■□□ 2.65
SAMD1-203ENST00000541938 PPRC1Q5VV67 1664 aaKnown RBP31.6■■■□□ 2.65
SAMD1-203ENST00000541938 MAP3K4Q9Y6R4 1608 aa31.6■■■□□ 2.65
SAMD1-203ENST00000541938 KDM6BO15054 1643 aa31.56■■■□□ 2.64
SAMD1-203ENST00000541938 CD109Q6YHK3 1445 aa31.54■■■□□ 2.64
SAMD1-203ENST00000541938 TEX14Q8IWB6 1497 aa31.52■■■□□ 2.64
SAMD1-203ENST00000541938 FMN1Q68DA7 1419 aa31.51■■■□□ 2.64
SAMD1-203ENST00000541938 AEBP2Q6ZN18 517 aaPredicted RBP31.49■■■□□ 2.63
SAMD1-203ENST00000541938 ATP1B4Q9UN42 357 aaPredicted RBP31.49■■■□□ 2.63
SAMD1-203ENST00000541938 PLEKHD1A6NEE1 506 aa31.48■■■□□ 2.63
SAMD1-203ENST00000541938 CFAP43Q8NDM7 1665 aa31.46■■■□□ 2.63
SAMD1-203ENST00000541938 MAGI3Q5TCQ9 1506 aa31.44■■■□□ 2.62
SAMD1-203ENST00000541938 COL17A1Q9UMD9 1497 aaPredicted RBP31.42■■■□□ 2.62
SAMD1-203ENST00000541938 CDK13Q14004 1512 aaKnown RBP31.38■■■□□ 2.61
SAMD1-203ENST00000541938 CLIP1P30622 1438 aa31.36■■■□□ 2.61
SAMD1-203ENST00000541938 ABCA9Q8IUA7 1624 aa31.35■■■□□ 2.61
SAMD1-203ENST00000541938 HECW1Q76N89 1606 aa31.34■■■□□ 2.61
SAMD1-203ENST00000541938 CDK11AQ9UQ88 783 aaPredicted RBP31.27■■■□□ 2.6
SAMD1-203ENST00000541938 CASKIN1Q8WXD9 1431 aa31.24■■■□□ 2.59
SAMD1-203ENST00000541938 LOC105371045A0A1W2PR82 267 aa31.22■■■□□ 2.59
SAMD1-203ENST00000541938 PHLDB1Q86UU1 1377 aa31.21■■■□□ 2.59
SAMD1-203ENST00000541938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.21■■■□□ 2.592e-24■□□□□ 10.6
SAMD1-203ENST00000541938 PCF11O94913 1555 aaKnown RBP31.18■■■□□ 2.58
SAMD1-203ENST00000541938 ARAP3Q8WWN8 1544 aa31.18■■■□□ 2.58
SAMD1-203ENST00000541938 NEO1Q92859 1461 aa31.17■■■□□ 2.58
SAMD1-203ENST00000541938 LRRIQ1Q96JM4 1722 aa31.15■■■□□ 2.58
SAMD1-203ENST00000541938 CEP162Q5TB80 1403 aa31.15■■■□□ 2.58
SAMD1-203ENST00000541938 TROQ12816 1431 aaPredicted RBP31.14■■■□□ 2.58
SAMD1-203ENST00000541938 TTC37Q6PGP7 1564 aa31.13■■■□□ 2.57
SAMD1-203ENST00000541938 CCDC18Q5T9S5 1454 aa31.11■■■□□ 2.57
SAMD1-203ENST00000541938 FYCO1Q9BQS8 1478 aa31.11■■■□□ 2.57
SAMD1-203ENST00000541938 KDM4FA0A1W2PPD8 638 aa31.1■■■□□ 2.57
SAMD1-203ENST00000541938 RAPGEF3O95398 923 aa31.1■■■□□ 2.57
SAMD1-203ENST00000541938 AKNAQ7Z591 1439 aa31.07■■■□□ 2.57
SAMD1-203ENST00000541938 FANCAO15360 1455 aa31.07■■■□□ 2.56
SAMD1-203ENST00000541938 PLCH2O75038 1416 aa31.07■■■□□ 2.56
SAMD1-203ENST00000541938 KIF14Q15058 1648 aa31.04■■■□□ 2.56
SAMD1-203ENST00000541938 EFCAB2Q5VUJ9 269 aa30.99■■■□□ 2.55
SAMD1-203ENST00000541938 DENND4BO75064 1496 aaPredicted RBP30.98■■■□□ 2.55
SAMD1-203ENST00000541938 CFAP74Q9C0B2 1584 aa30.97■■■□□ 2.55
SAMD1-203ENST00000541938 MYO5CQ9NQX4 1742 aa30.93■■■□□ 2.54
SAMD1-203ENST00000541938 FRMPD1Q5SYB0 1578 aa30.92■■■□□ 2.54
SAMD1-203ENST00000541938 SCAPERQ9BY12 1400 aa30.91■■■□□ 2.54
SAMD1-203ENST00000541938 ADGRL1O94910 1474 aa30.91■■■□□ 2.54
SAMD1-203ENST00000541938 ARHGAP5Q13017 1502 aa30.87■■■□□ 2.53
SAMD1-203ENST00000541938 RICTORQ6R327 1708 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms