RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 NPM2Q86SE8 214 aaKnown RBP12.06□□□□□ -0.48
FNDC3A-206ENST00000541916 MYO15BQ96JP2 1530 aa12.05□□□□□ -0.48
FNDC3A-206ENST00000541916 ATAD2BQ9ULI0 1458 aa12.05□□□□□ -0.48
FNDC3A-206ENST00000541916 DNAJC5BQ9UF47 199 aa12.04□□□□□ -0.48
FNDC3A-206ENST00000541916 GGT6Q6P531 493 aa12.03□□□□□ -0.48
FNDC3A-206ENST00000541916 FANCD2Q9BXW9 1451 aa12.03□□□□□ -0.48
FNDC3A-206ENST00000541916 KDM2AQ9Y2K7 1162 aa12.03□□□□□ -0.48
FNDC3A-206ENST00000541916 FAM69CQ0P6D2 419 aa12.03□□□□□ -0.48
FNDC3A-206ENST00000541916 CLIP1P30622 1438 aa12.03□□□□□ -0.48
FNDC3A-206ENST00000541916 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
FNDC3A-206ENST00000541916 JPH4Q96JJ6 628 aa12□□□□□ -0.49
FNDC3A-206ENST00000541916 RRP7BPQ9NSQ0 103 aa12□□□□□ -0.49
FNDC3A-206ENST00000541916 KANK1Q14678 1352 aa11.99□□□□□ -0.49
FNDC3A-206ENST00000541916 HRCP23327 699 aa11.99□□□□□ -0.49
FNDC3A-206ENST00000541916 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
FNDC3A-206ENST00000541916 CCNB3Q8WWL7 1395 aa11.98□□□□□ -0.49
FNDC3A-206ENST00000541916 CCDC88BA6NC98 1476 aa11.97□□□□□ -0.49
FNDC3A-206ENST00000541916 EFCAB2Q5VUJ9 269 aa11.97□□□□□ -0.49
FNDC3A-206ENST00000541916 EEA1Q15075 1411 aa11.96□□□□□ -0.5
FNDC3A-206ENST00000541916 ABCC8Q09428 1581 aa11.96□□□□□ -0.5
FNDC3A-206ENST00000541916 CC2D2AQ9P2K1 1620 aa11.95□□□□□ -0.5
FNDC3A-206ENST00000541916 POGKQ9P215 609 aa11.95□□□□□ -0.5
FNDC3A-206ENST00000541916 RGL3Q3MIN7 710 aa11.94□□□□□ -0.5
FNDC3A-206ENST00000541916 GOLGA3Q08378 1498 aa11.93□□□□□ -0.5
FNDC3A-206ENST00000541916 BCL11AQ9H165 835 aa11.93□□□□□ -0.5
FNDC3A-206ENST00000541916 EID1Q9Y6B2 187 aa11.91□□□□□ -0.5
FNDC3A-206ENST00000541916 TONSLQ96HA7 1378 aa11.91□□□□□ -0.5
FNDC3A-206ENST00000541916 CCDC9Q9Y3X0 531 aaKnown RBP11.9□□□□□ -0.5
FNDC3A-206ENST00000541916 CANXP27824 592 aaKnown RBP11.89□□□□□ -0.51
FNDC3A-206ENST00000541916 PTPRGP23470 1445 aa11.89□□□□□ -0.51
FNDC3A-206ENST00000541916 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
FNDC3A-206ENST00000541916 TMC1Q8TDI8 760 aa11.89□□□□□ -0.51
FNDC3A-206ENST00000541916 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
FNDC3A-206ENST00000541916 TOP2AP11388 1531 aaKnown RBP11.87□□□□□ -0.51
FNDC3A-206ENST00000541916 ARXQ96QS3 562 aa11.87□□□□□ -0.51
FNDC3A-206ENST00000541916 NPHP1O15259 732 aa11.86□□□□□ -0.51
FNDC3A-206ENST00000541916 PHF23Q9BUL5 403 aaPredicted RBP11.86□□□□□ -0.51
FNDC3A-206ENST00000541916 MEX3CQ5U5Q3 659 aaKnown RBP11.85□□□□□ -0.51
FNDC3A-206ENST00000541916 MRC2Q9UBG0 1479 aa11.84□□□□□ -0.51
FNDC3A-206ENST00000541916 NCAPD3P42695 1498 aa11.83□□□□□ -0.52
FNDC3A-206ENST00000541916 FHAD1B1AJZ9 1412 aa11.83□□□□□ -0.52
FNDC3A-206ENST00000541916 WIZO95785 1651 aa11.83□□□□□ -0.52
FNDC3A-206ENST00000541916 ANP32CO43423 234 aa11.82□□□□□ -0.52
FNDC3A-206ENST00000541916 DAXXQ9UER7 740 aaPredicted RBP11.81□□□□□ -0.52
FNDC3A-206ENST00000541916 KIF3BO15066 747 aa11.81□□□□□ -0.52
FNDC3A-206ENST00000541916 ACIN1Q9UKV3 1341 aaKnown RBP11.81□□□□□ -0.52
FNDC3A-206ENST00000541916 WASHC2CQ9Y4E1 1318 aa11.81□□□□□ -0.52
FNDC3A-206ENST00000541916 SPAG9O60271 1321 aaKnown RBP11.8□□□□□ -0.52
FNDC3A-206ENST00000541916 AQRO60306 1485 aaKnown RBP eCLIP11.79□□□□□ -0.525e-6■■■■□ 23.2
FNDC3A-206ENST00000541916 NESP48681 1621 aa11.78□□□□□ -0.52
FNDC3A-206ENST00000541916 GAPVD1Q14C86 1478 aa11.77□□□□□ -0.53
FNDC3A-206ENST00000541916 PPM1GO15355 546 aaPredicted RBP11.77□□□□□ -0.53
FNDC3A-206ENST00000541916 DIEXFQ68CQ4 756 aaKnown RBP11.77□□□□□ -0.53
FNDC3A-206ENST00000541916 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
FNDC3A-206ENST00000541916 STK26Q9P289 416 aa11.75□□□□□ -0.53
FNDC3A-206ENST00000541916 HNRNPMP52272 730 aaKnown RBP eCLIP11.74□□□□□ -0.536e-7■■■■■ 27.4
FNDC3A-206ENST00000541916 CSB-PGBD3P0DP91 1061 aa11.73□□□□□ -0.53
FNDC3A-206ENST00000541916 SAFB2Q14151 953 aaKnown RBP eCLIP11.73□□□□□ -0.53
FNDC3A-206ENST00000541916 RAD54L2Q9Y4B4 1467 aa11.73□□□□□ -0.53
FNDC3A-206ENST00000541916 SOX12O15370 315 aa11.73□□□□□ -0.53
FNDC3A-206ENST00000541916 IFT140Q96RY7 1462 aa11.72□□□□□ -0.53
FNDC3A-206ENST00000541916 RAPGEF2Q9Y4G8 1499 aa11.72□□□□□ -0.53
FNDC3A-206ENST00000541916 FMN1Q68DA7 1419 aa11.72□□□□□ -0.53
FNDC3A-206ENST00000541916 CEP162Q5TB80 1403 aa11.71□□□□□ -0.53
FNDC3A-206ENST00000541916 FGD5Q6ZNL6 1462 aa11.7□□□□□ -0.54
FNDC3A-206ENST00000541916 SRPK2P78362 688 aaKnown RBP11.7□□□□□ -0.54
FNDC3A-206ENST00000541916 CDCA8Q53HL2 280 aa11.7□□□□□ -0.54
FNDC3A-206ENST00000541916 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
FNDC3A-206ENST00000541916 GRIN2BQ13224 1484 aa11.69□□□□□ -0.54
FNDC3A-206ENST00000541916 WDR43Q15061 677 aaKnown RBP eCLIP11.68□□□□□ -0.54
FNDC3A-206ENST00000541916 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
FNDC3A-206ENST00000541916 TNIKQ9UKE5 1360 aa11.66□□□□□ -0.54
FNDC3A-206ENST00000541916 NUTM2DQ5VT03 806 aaPredicted RBP11.66□□□□□ -0.54
FNDC3A-206ENST00000541916 PRG4Q92954 1404 aaPredicted RBP11.66□□□□□ -0.54
FNDC3A-206ENST00000541916 CFAP53Q96M91 514 aa11.64□□□□□ -0.55
FNDC3A-206ENST00000541916 FHOD3Q2V2M9 1422 aa11.63□□□□□ -0.55
FNDC3A-206ENST00000541916 CARD11Q9BXL7 1154 aa11.62□□□□□ -0.55
FNDC3A-206ENST00000541916 FOXD1Q16676 465 aa11.62□□□□□ -0.55
FNDC3A-206ENST00000541916 ANKRD30AQ9BXX3 1397 aa11.62□□□□□ -0.55
FNDC3A-206ENST00000541916 CCDC18Q5T9S5 1454 aa11.62□□□□□ -0.55
FNDC3A-206ENST00000541916 NGDNQ8NEJ9 315 aaKnown RBP11.61□□□□□ -0.55
FNDC3A-206ENST00000541916 ATF3P18847 181 aa11.6□□□□□ -0.55
FNDC3A-206ENST00000541916 DCAF11Q8TEB1 546 aa11.6□□□□□ -0.55
FNDC3A-206ENST00000541916 PIP4K2BP78356 416 aa11.59□□□□□ -0.55
FNDC3A-206ENST00000541916 ARHGAP35Q9NRY4 1499 aa11.59□□□□□ -0.55
FNDC3A-206ENST00000541916 ZNF316A6NFI3 1004 aaPredicted RBP11.59□□□□□ -0.55
FNDC3A-206ENST00000541916 EVA1CP58658 441 aa11.59□□□□□ -0.55
FNDC3A-206ENST00000541916 KNSTRNQ9Y448 316 aa11.59□□□□□ -0.55
FNDC3A-206ENST00000541916 NUTM2FA1L443 756 aa11.58□□□□□ -0.56
FNDC3A-206ENST00000541916 SNAPC4Q5SXM2 1469 aa11.58□□□□□ -0.56
FNDC3A-206ENST00000541916 POGZQ7Z3K3 1410 aa11.58□□□□□ -0.56
FNDC3A-206ENST00000541916 HDGFL2Q7Z4V5 671 aaPredicted RBP11.57□□□□□ -0.56
FNDC3A-206ENST00000541916 SALL2Q9Y467 1007 aaPredicted RBP11.57□□□□□ -0.56
FNDC3A-206ENST00000541916 HMGXB3Q12766 1538 aa11.57□□□□□ -0.56
FNDC3A-206ENST00000541916 TMX4Q9H1E5 349 aaPredicted RBP11.56□□□□□ -0.56
FNDC3A-206ENST00000541916 NUP155O75694 1391 aa11.56□□□□□ -0.56
FNDC3A-206ENST00000541916 EIF4G2P78344 907 aaKnown RBP eCLIP11.55□□□□□ -0.56
FNDC3A-206ENST00000541916 PKD2Q13563 968 aa11.55□□□□□ -0.56
FNDC3A-206ENST00000541916 TNNT2P45379 298 aaPredicted RBP11.55□□□□□ -0.56
FNDC3A-206ENST00000541916 MSH5O43196 834 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms