RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 ATAD2BQ9ULI0 1458 aa19.99■□□□□ 0.79
GCFC2-211ENST00000541687 SENP3-EIF4A1A0A087X0R7 540 aa19.98■□□□□ 0.79
GCFC2-211ENST00000541687 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
GCFC2-211ENST00000541687 CLSPNQ9HAW4 1339 aa19.98■□□□□ 0.79
GCFC2-211ENST00000541687 EIF4G1Q04637 1599 aaKnown RBP19.98■□□□□ 0.79
GCFC2-211ENST00000541687 SUPT16HQ9Y5B9 1047 aaKnown RBP19.93■□□□□ 0.78
GCFC2-211ENST00000541687 SALL2Q9Y467 1007 aaPredicted RBP19.92■□□□□ 0.78
GCFC2-211ENST00000541687 BICRAQ9NZM4 1560 aa19.91■□□□□ 0.78
GCFC2-211ENST00000541687 MRS2Q9HD23 443 aa19.9■□□□□ 0.78
GCFC2-211ENST00000541687 RAB3GAP2Q9H2M9 1393 aa19.9■□□□□ 0.78
GCFC2-211ENST00000541687 KDM2AQ9Y2K7 1162 aa19.88■□□□□ 0.77
GCFC2-211ENST00000541687 EIF4G2P78344 907 aaKnown RBP eCLIP19.87■□□□□ 0.77
GCFC2-211ENST00000541687 KCNH8Q96L42 1107 aa19.85■□□□□ 0.77
GCFC2-211ENST00000541687 DHX57Q6P158 1386 aaKnown RBP19.84■□□□□ 0.77
GCFC2-211ENST00000541687 SETD5Q9C0A6 1442 aa19.82■□□□□ 0.76
GCFC2-211ENST00000541687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.8■□□□□ 0.766e-7■■□□□ 13.5
GCFC2-211ENST00000541687 FHAD1B1AJZ9 1412 aa19.8■□□□□ 0.76
GCFC2-211ENST00000541687 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
GCFC2-211ENST00000541687 TDRD9Q8NDG6 1382 aaKnown RBP19.76■□□□□ 0.75
GCFC2-211ENST00000541687 FOXD1Q16676 465 aa19.76■□□□□ 0.75
GCFC2-211ENST00000541687 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
GCFC2-211ENST00000541687 FHOD3Q2V2M9 1422 aa19.73■□□□□ 0.75
GCFC2-211ENST00000541687 NPM2Q86SE8 214 aaKnown RBP19.72■□□□□ 0.75
GCFC2-211ENST00000541687 TSPY4P0CV99 314 aa19.71■□□□□ 0.75
GCFC2-211ENST00000541687 TSPY10P0CW01 314 aa19.71■□□□□ 0.75
GCFC2-211ENST00000541687 SYNJ1O43426 1573 aa19.7■□□□□ 0.74
GCFC2-211ENST00000541687 CFDP1Q9UEE9 299 aaPredicted RBP19.68■□□□□ 0.74
GCFC2-211ENST00000541687 CADPSQ9ULU8 1353 aa19.67■□□□□ 0.74
GCFC2-211ENST00000541687 ARHGAP35Q9NRY4 1499 aa19.67■□□□□ 0.74
GCFC2-211ENST00000541687 KIF21BO75037 1637 aa19.67■□□□□ 0.74
GCFC2-211ENST00000541687 PPP1R15AO75807 674 aaPredicted RBP19.66■□□□□ 0.74
GCFC2-211ENST00000541687 RGL3Q3MIN7 710 aa19.65■□□□□ 0.74
GCFC2-211ENST00000541687 CCDC136Q96JN2 1154 aa19.65■□□□□ 0.74
GCFC2-211ENST00000541687 HSPA5P11021 654 aaKnown RBP19.61■□□□□ 0.73
GCFC2-211ENST00000541687 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
GCFC2-211ENST00000541687 IGF1RP08069 1367 aa19.6■□□□□ 0.73
GCFC2-211ENST00000541687 TIMELESSQ9UNS1 1208 aa19.6■□□□□ 0.73
GCFC2-211ENST00000541687 ANP32AP39687 249 aaKnown RBP19.59■□□□□ 0.73
GCFC2-211ENST00000541687 PLEKHD1A6NEE1 506 aa19.58■□□□□ 0.73
GCFC2-211ENST00000541687 ARAP1Q96P48 1450 aa19.57■□□□□ 0.72
GCFC2-211ENST00000541687 CHGAP10645 457 aaKnown RBP19.55■□□□□ 0.72
GCFC2-211ENST00000541687 NBR1Q14596 966 aa19.54■□□□□ 0.72
GCFC2-211ENST00000541687 CARD11Q9BXL7 1154 aa19.52■□□□□ 0.72
GCFC2-211ENST00000541687 CCER2I3L3R5 266 aa19.52■□□□□ 0.72
GCFC2-211ENST00000541687 B4GALNT3Q6L9W6 998 aa19.52■□□□□ 0.72
GCFC2-211ENST00000541687 BCL11AQ9H165 835 aa19.52■□□□□ 0.72
GCFC2-211ENST00000541687 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
GCFC2-211ENST00000541687 MPHOSPH9Q99550 1183 aa19.5■□□□□ 0.71
GCFC2-211ENST00000541687 PHLDB1Q86UU1 1377 aa19.5■□□□□ 0.71
GCFC2-211ENST00000541687 CANXP27824 592 aaKnown RBP19.5■□□□□ 0.71
GCFC2-211ENST00000541687 FMN1Q68DA7 1419 aa19.5■□□□□ 0.71
GCFC2-211ENST00000541687 ANP32EQ9BTT0 268 aa19.49■□□□□ 0.71
GCFC2-211ENST00000541687 L3MBTL2Q969R5 705 aa19.48■□□□□ 0.71
GCFC2-211ENST00000541687 FGD5Q6ZNL6 1462 aa19.47■□□□□ 0.71
GCFC2-211ENST00000541687 SENP3Q9H4L4 574 aaPredicted RBP19.46■□□□□ 0.71
GCFC2-211ENST00000541687 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
GCFC2-211ENST00000541687 FANCD2Q9BXW9 1451 aa19.44■□□□□ 0.7
GCFC2-211ENST00000541687 RBM19Q9Y4C8 960 aaKnown RBP19.44■□□□□ 0.7
GCFC2-211ENST00000541687 DCAF11Q8TEB1 546 aa19.41■□□□□ 0.7
GCFC2-211ENST00000541687 PKD2Q13563 968 aa19.41■□□□□ 0.7
GCFC2-211ENST00000541687 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
GCFC2-211ENST00000541687 NCAPD3P42695 1498 aa19.4■□□□□ 0.7
GCFC2-211ENST00000541687 EIF5BO60841 1220 aaKnown RBP19.4■□□□□ 0.7
GCFC2-211ENST00000541687 PPP4R2Q9NY27 417 aa19.39■□□□□ 0.69
GCFC2-211ENST00000541687 ZBTB47Q9UFB7 747 aaPredicted RBP19.36■□□□□ 0.69
GCFC2-211ENST00000541687 WDR43Q15061 677 aaKnown RBP eCLIP19.36■□□□□ 0.69
GCFC2-211ENST00000541687 PDS5BQ9NTI5 1447 aa19.34■□□□□ 0.69
GCFC2-211ENST00000541687 CUX1P39880 1505 aa19.34■□□□□ 0.69
GCFC2-211ENST00000541687 LRRC9Q6ZRR7 1453 aa19.34■□□□□ 0.69
GCFC2-211ENST00000541687 CC2D1BQ5T0F9 858 aaKnown RBP19.33■□□□□ 0.69
GCFC2-211ENST00000541687 RRBP1Q9P2E9 1410 aaKnown RBP19.33■□□□□ 0.68
GCFC2-211ENST00000541687 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
GCFC2-211ENST00000541687 CFTRP13569 1480 aa19.31■□□□□ 0.68
GCFC2-211ENST00000541687 CCDC18Q5T9S5 1454 aa19.31■□□□□ 0.68
GCFC2-211ENST00000541687 ERICH3Q5RHP9 1530 aa19.3■□□□□ 0.68
GCFC2-211ENST00000541687 ERCC6Q03468 1493 aa19.29■□□□□ 0.68
GCFC2-211ENST00000541687 ZNF644Q9H582 1327 aaPredicted RBP19.26■□□□□ 0.67
GCFC2-211ENST00000541687 FGD6Q6ZV73 1430 aa19.25■□□□□ 0.67
GCFC2-211ENST00000541687 NUP155O75694 1391 aa19.24■□□□□ 0.67
GCFC2-211ENST00000541687 HNRNPMP52272 730 aaKnown RBP eCLIP19.21■□□□□ 0.67
GCFC2-211ENST00000541687 KNSTRNQ9Y448 316 aa19.21■□□□□ 0.67
GCFC2-211ENST00000541687 NESP48681 1621 aa19.2■□□□□ 0.66
GCFC2-211ENST00000541687 PRKRIP1Q9H875 184 aaPredicted RBP19.19■□□□□ 0.66
GCFC2-211ENST00000541687 GAPVD1Q14C86 1478 aa19.17■□□□□ 0.66
GCFC2-211ENST00000541687 NPM1P06748 294 aaKnown RBP eCLIP19.17■□□□□ 0.66
GCFC2-211ENST00000541687 NEUROD2Q15784 382 aa19.17■□□□□ 0.66
GCFC2-211ENST00000541687 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.15■□□□□ 0.66
GCFC2-211ENST00000541687 TNNT2P45379 298 aaPredicted RBP19.15■□□□□ 0.66
GCFC2-211ENST00000541687 HMGXB3Q12766 1538 aa19.14■□□□□ 0.65
GCFC2-211ENST00000541687 MYOM3Q5VTT5 1437 aa19.13■□□□□ 0.65
GCFC2-211ENST00000541687 JPH4Q96JJ6 628 aa19.13■□□□□ 0.65
GCFC2-211ENST00000541687 CASKIN1Q8WXD9 1431 aa19.13■□□□□ 0.65
GCFC2-211ENST00000541687 WASHC2AQ641Q2 1341 aa19.13■□□□□ 0.65
GCFC2-211ENST00000541687 STAG3Q9UJ98 1225 aa19.12■□□□□ 0.65
GCFC2-211ENST00000541687 UACAQ9BZF9 1416 aa19.12■□□□□ 0.65
GCFC2-211ENST00000541687 ST20-MTHFSA0A0A6YYL1 179 aa19.12■□□□□ 0.65
GCFC2-211ENST00000541687 NEFMP07197 916 aa19.12■□□□□ 0.65
GCFC2-211ENST00000541687 ANKRD30AQ9BXX3 1397 aa19.11■□□□□ 0.65
GCFC2-211ENST00000541687 AQRO60306 1485 aaKnown RBP eCLIP19.11■□□□□ 0.659e-6■□□□□ 10.2
GCFC2-211ENST00000541687 NCOA2Q15596 1464 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms