RNA–Protein interactions for RNA: ENST00000541349.5

KCNK4-209, Transcript of potassium two pore domain channel subfamily K member 4, humanhuman

TSL 1 (best)

Gene KCNK4, Length 1,450 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNK4-209ENST00000541349 NUP160Q12769 1436 aa28.93■■■□□ 2.22
KCNK4-209ENST00000541349 PRXQ9BXM0 1461 aa28.92■■■□□ 2.22
KCNK4-209ENST00000541349 RAPGEF2Q9Y4G8 1499 aa28.91■■■□□ 2.22
KCNK4-209ENST00000541349 CEP170Q5SW79 1584 aa28.89■■■□□ 2.21
KCNK4-209ENST00000541349 FAM9AQ8IZU1 332 aaPredicted RBP28.88■■■□□ 2.21
KCNK4-209ENST00000541349 KIF21BO75037 1637 aa28.74■■■□□ 2.19
KCNK4-209ENST00000541349 KIAA0586Q9BVV6 1533 aa28.72■■■□□ 2.19
KCNK4-209ENST00000541349 SHROOM2Q13796 1616 aa28.64■■■□□ 2.18
KCNK4-209ENST00000541349 ERCC6L2Q5T890 1561 aa28.64■■■□□ 2.18
KCNK4-209ENST00000541349 IQGAP2Q13576 1575 aa28.61■■■□□ 2.17
KCNK4-209ENST00000541349 GOLGA3Q08378 1498 aa28.59■■■□□ 2.17
KCNK4-209ENST00000541349 CTTNBP2Q8WZ74 1663 aa28.58■■■□□ 2.17
KCNK4-209ENST00000541349 JPH4Q96JJ6 628 aa28.57■■■□□ 2.16
KCNK4-209ENST00000541349 PRG4Q92954 1404 aaPredicted RBP28.5■■■□□ 2.15
KCNK4-209ENST00000541349 UGGT2Q9NYU1 1516 aa28.48■■■□□ 2.15
KCNK4-209ENST00000541349 EHMT2Q96KQ7 1210 aa28.46■■■□□ 2.15
KCNK4-209ENST00000541349 UBTFP17480 764 aaKnown RBP28.41■■■□□ 2.14
KCNK4-209ENST00000541349 DISP1Q96F81 1524 aa28.39■■■□□ 2.14
KCNK4-209ENST00000541349 AEBP2Q6ZN18 517 aaPredicted RBP28.37■■■□□ 2.13
KCNK4-209ENST00000541349 CARMIL2Q6F5E8 1435 aa28.37■■■□□ 2.13
KCNK4-209ENST00000541349 KIAA0556O60303 1618 aa28.34■■■□□ 2.13
KCNK4-209ENST00000541349 KIF13AQ9H1H9 1805 aa28.3■■■□□ 2.12
KCNK4-209ENST00000541349 TNIKQ9UKE5 1360 aa28.29■■■□□ 2.12
KCNK4-209ENST00000541349 SAMD9Q5K651 1589 aa28.28■■■□□ 2.12
KCNK4-209ENST00000541349 EFCAB5A4FU69 1503 aa28.23■■■□□ 2.11
KCNK4-209ENST00000541349 RANGAP1P46060 587 aaPredicted RBP28.21■■■□□ 2.11
KCNK4-209ENST00000541349 PTPRGP23470 1445 aa28.2■■■□□ 2.1
KCNK4-209ENST00000541349 LOC105371045A0A1W2PR82 267 aa28.2■■■□□ 2.1
KCNK4-209ENST00000541349 NPM1P06748 294 aaKnown RBP eCLIP28.15■■■□□ 2.1
KCNK4-209ENST00000541349 MAPKBP1O60336 1514 aa28.15■■■□□ 2.1
KCNK4-209ENST00000541349 ARHGAP35Q9NRY4 1499 aa28.14■■■□□ 2.1
KCNK4-209ENST00000541349 ABCC10Q5T3U5 1492 aa28.13■■■□□ 2.09
KCNK4-209ENST00000541349 P3H3Q8IVL6 736 aa28.13■■■□□ 2.09
KCNK4-209ENST00000541349 ADCY10Q96PN6 1610 aa28.13■■■□□ 2.09
KCNK4-209ENST00000541349 FHOD3Q2V2M9 1422 aa28.12■■■□□ 2.09
KCNK4-209ENST00000541349 TTBK1Q5TCY1 1321 aaPredicted RBP28.11■■■□□ 2.09
KCNK4-209ENST00000541349 FAM69CQ0P6D2 419 aa28.08■■■□□ 2.09
KCNK4-209ENST00000541349 CLIP1P30622 1438 aa28.08■■■□□ 2.08
KCNK4-209ENST00000541349 DIP2BQ9P265 1576 aa28.06■■■□□ 2.08
KCNK4-209ENST00000541349 CEP162Q5TB80 1403 aa28.05■■■□□ 2.08
KCNK4-209ENST00000541349 UACAQ9BZF9 1416 aa28.04■■■□□ 2.08
KCNK4-209ENST00000541349 UHRF1BP1LA0JNW5 1464 aa28.02■■■□□ 2.08
KCNK4-209ENST00000541349 PLB1Q6P1J6 1458 aa28.01■■■□□ 2.07
KCNK4-209ENST00000541349 ABCA8O94911 1581 aa28.01■■■□□ 2.07
KCNK4-209ENST00000541349 ABCC2Q92887 1545 aa28■■■□□ 2.07
KCNK4-209ENST00000541349 FMN1Q68DA7 1419 aa27.95■■■□□ 2.07
KCNK4-209ENST00000541349 RAPGEF6Q8TEU7 1601 aa27.91■■■□□ 2.06
KCNK4-209ENST00000541349 KDM5BQ9UGL1 1544 aa27.89■■■□□ 2.06
KCNK4-209ENST00000541349 KDM6BO15054 1643 aa27.88■■■□□ 2.05
KCNK4-209ENST00000541349 TSPOAP1O95153 1857 aa27.87■■■□□ 2.05
KCNK4-209ENST00000541349 NUP153P49790 1475 aaKnown RBP27.84■■■□□ 2.05
KCNK4-209ENST00000541349 ZCCHC11Q5TAX3 1644 aaKnown RBP27.81■■■□□ 2.04
KCNK4-209ENST00000541349 PCF11O94913 1555 aaKnown RBP27.77■■■□□ 2.04
KCNK4-209ENST00000541349 HECW1Q76N89 1606 aa27.77■■■□□ 2.04
KCNK4-209ENST00000541349 CASKIN1Q8WXD9 1431 aa27.77■■■□□ 2.04
KCNK4-209ENST00000541349 ATP10BO94823 1461 aa27.77■■■□□ 2.04
KCNK4-209ENST00000541349 ASXL2Q76L83 1435 aa27.74■■■□□ 2.03
KCNK4-209ENST00000541349 FYCO1Q9BQS8 1478 aa27.74■■■□□ 2.03
KCNK4-209ENST00000541349 GLI2P10070 1586 aa27.73■■■□□ 2.03
KCNK4-209ENST00000541349 ARID3CA6NKF2 412 aa27.71■■■□□ 2.03
KCNK4-209ENST00000541349 VPS8Q8N3P4 1428 aa27.7■■■□□ 2.02
KCNK4-209ENST00000541349 EPRSP07814 1512 aaKnown RBP27.69■■■□□ 2.02
KCNK4-209ENST00000541349 PPRC1Q5VV67 1664 aaKnown RBP27.67■■■□□ 2.02
KCNK4-209ENST00000541349 CDK13Q14004 1512 aaKnown RBP27.67■■■□□ 2.02
KCNK4-209ENST00000541349 ATP1B4Q9UN42 357 aaPredicted RBP27.66■■■□□ 2.02
KCNK4-209ENST00000541349 WDR7Q9Y4E6 1490 aa27.65■■■□□ 2.02
KCNK4-209ENST00000541349 KDM4FA0A1W2PPD8 638 aa27.64■■■□□ 2.01
KCNK4-209ENST00000541349 CCDC18Q5T9S5 1454 aa27.63■■■□□ 2.01
KCNK4-209ENST00000541349 LRRIQ1Q96JM4 1722 aa27.63■■■□□ 2.01
KCNK4-209ENST00000541349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
KCNK4-209ENST00000541349 HNRNPUL2Q1KMD3 747 aaKnown RBP27.61■■■□□ 2.01
KCNK4-209ENST00000541349 MAP3K4Q9Y6R4 1608 aa27.57■■■□□ 2
KCNK4-209ENST00000541349 PLEKHD1A6NEE1 506 aa27.51■■■□□ 2
KCNK4-209ENST00000541349 TEX14Q8IWB6 1497 aa27.51■■□□□ 1.99
KCNK4-209ENST00000541349 CDK11AQ9UQ88 783 aaPredicted RBP27.5■■□□□ 1.99
KCNK4-209ENST00000541349 TROQ12816 1431 aaPredicted RBP27.46■■□□□ 1.99
KCNK4-209ENST00000541349 MAGI3Q5TCQ9 1506 aa27.46■■□□□ 1.99
KCNK4-209ENST00000541349 KCNH8Q96L42 1107 aa27.45■■□□□ 1.99
KCNK4-209ENST00000541349 COL17A1Q9UMD9 1497 aaPredicted RBP27.45■■□□□ 1.99
KCNK4-209ENST00000541349 CFAP43Q8NDM7 1665 aa27.44■■□□□ 1.98
KCNK4-209ENST00000541349 TIAM1Q13009 1591 aa27.43■■□□□ 1.98
KCNK4-209ENST00000541349 MAP3K1Q13233 1512 aa27.41■■□□□ 1.98
KCNK4-209ENST00000541349 ADGRL1O94910 1474 aa27.41■■□□□ 1.98
KCNK4-209ENST00000541349 ABCA9Q8IUA7 1624 aa27.39■■□□□ 1.97
KCNK4-209ENST00000541349 KIF14Q15058 1648 aa27.36■■□□□ 1.97
KCNK4-209ENST00000541349 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.35■■□□□ 1.97
KCNK4-209ENST00000541349 MTUS2Q5JR59 1369 aa27.35■■□□□ 1.97
KCNK4-209ENST00000541349 EHBP1L1Q8N3D4 1523 aa27.35■■□□□ 1.97
KCNK4-209ENST00000541349 CD109Q6YHK3 1445 aa27.32■■□□□ 1.96
KCNK4-209ENST00000541349 TTC37Q6PGP7 1564 aa27.32■■□□□ 1.96
KCNK4-209ENST00000541349 LRRC9Q6ZRR7 1453 aa27.3■■□□□ 1.96
KCNK4-209ENST00000541349 APLP2Q06481 763 aa27.29■■□□□ 1.96
KCNK4-209ENST00000541349 KANK4Q5T7N3 995 aaPredicted RBP27.25■■□□□ 1.95
KCNK4-209ENST00000541349 PLCH2O75038 1416 aa27.19■■□□□ 1.94
KCNK4-209ENST00000541349 SUPT6HQ7KZ85 1726 aaKnown RBP27.19■■□□□ 1.94
KCNK4-209ENST00000541349 ARAP3Q8WWN8 1544 aa27.18■■□□□ 1.94
KCNK4-209ENST00000541349 NCOA2Q15596 1464 aa27.18■■□□□ 1.94
KCNK4-209ENST00000541349 MYO5CQ9NQX4 1742 aa27.17■■□□□ 1.94
KCNK4-209ENST00000541349 PREX2Q70Z35 1606 aa27.14■■□□□ 1.93
KCNK4-209ENST00000541349 GPATCH8Q9UKJ3 1502 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms