RNA–Protein interactions for RNA: ENST00000541225.5

ABCA8-204, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 2

Gene ABCA8, Length 3,657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-204ENST00000541225 AKNAQ7Z591 1439 aa7.28□□□□□ -1.24
ABCA8-204ENST00000541225 CC2D2AQ9P2K1 1620 aa7.28□□□□□ -1.24
ABCA8-204ENST00000541225 LAMC1P11047 1609 aa7.27□□□□□ -1.25
ABCA8-204ENST00000541225 CROCC2H7BZ55 1655 aa7.25□□□□□ -1.25
ABCA8-204ENST00000541225 TCOF1Q13428 1488 aaKnown RBP7.25□□□□□ -1.25
ABCA8-204ENST00000541225 RAPGEF2Q9Y4G8 1499 aa7.25□□□□□ -1.25
ABCA8-204ENST00000541225 RNF123Q5XPI4 1314 aa7.25□□□□□ -1.25
ABCA8-204ENST00000541225 SHROOM2Q13796 1616 aa7.25□□□□□ -1.25
ABCA8-204ENST00000541225 EFCAB5A4FU69 1503 aa7.25□□□□□ -1.25
ABCA8-204ENST00000541225 MBD5Q9P267 1494 aa7.25□□□□□ -1.25
ABCA8-204ENST00000541225 ARHGAP35Q9NRY4 1499 aa7.24□□□□□ -1.25
ABCA8-204ENST00000541225 CUX1P39880 1505 aa7.24□□□□□ -1.25
ABCA8-204ENST00000541225 PTPN23Q9H3S7 1636 aa7.23□□□□□ -1.25
ABCA8-204ENST00000541225 CUL7Q14999 1698 aa7.23□□□□□ -1.25
ABCA8-204ENST00000541225 PRKCSHP14314 528 aaPredicted RBP7.23□□□□□ -1.25
ABCA8-204ENST00000541225 GAPVD1Q14C86 1478 aa7.22□□□□□ -1.25
ABCA8-204ENST00000541225 MIER1Q8N108 512 aa7.22□□□□□ -1.25
ABCA8-204ENST00000541225 SNAPC4Q5SXM2 1469 aa7.22□□□□□ -1.25
ABCA8-204ENST00000541225 ERICH6BQ5W0A0 696 aa7.21□□□□□ -1.25
ABCA8-204ENST00000541225 TIMELESSQ9UNS1 1208 aa7.21□□□□□ -1.25
ABCA8-204ENST00000541225 PPP1R15AO75807 674 aaPredicted RBP7.2□□□□□ -1.26
ABCA8-204ENST00000541225 MSH5O43196 834 aa7.2□□□□□ -1.26
ABCA8-204ENST00000541225 ADCY10Q96PN6 1610 aa7.2□□□□□ -1.26
ABCA8-204ENST00000541225 INSRP06213 1382 aa7.2□□□□□ -1.26
ABCA8-204ENST00000541225 PCF11O94913 1555 aaKnown RBP7.19□□□□□ -1.26
ABCA8-204ENST00000541225 ATAD2BQ9ULI0 1458 aa7.18□□□□□ -1.26
ABCA8-204ENST00000541225 SPATA31E1Q6ZUB1 1445 aa7.17□□□□□ -1.26
ABCA8-204ENST00000541225 FHAD1B1AJZ9 1412 aa7.17□□□□□ -1.26
ABCA8-204ENST00000541225 FYCO1Q9BQS8 1478 aa7.17□□□□□ -1.26
ABCA8-204ENST00000541225 LRRC9Q6ZRR7 1453 aa7.16□□□□□ -1.26
ABCA8-204ENST00000541225 CCER2I3L3R5 266 aa7.16□□□□□ -1.26
ABCA8-204ENST00000541225 PHF23Q9BUL5 403 aaPredicted RBP7.16□□□□□ -1.26
ABCA8-204ENST00000541225 MYT1LQ9UL68 1186 aa7.16□□□□□ -1.26
ABCA8-204ENST00000541225 CSRNP3Q8WYN3 585 aa7.16□□□□□ -1.26
ABCA8-204ENST00000541225 C11orf95C9JLR9 678 aaPredicted RBP7.15□□□□□ -1.26
ABCA8-204ENST00000541225 CCDC18Q5T9S5 1454 aa7.15□□□□□ -1.26
ABCA8-204ENST00000541225 KDM5DQ9BY66 1539 aa7.15□□□□□ -1.27
ABCA8-204ENST00000541225 ARHGEF12Q9NZN5 1544 aa7.15□□□□□ -1.27
ABCA8-204ENST00000541225 ADGBQ8N7X0 1667 aa7.15□□□□□ -1.27
ABCA8-204ENST00000541225 CFTRP13569 1480 aa7.14□□□□□ -1.27
ABCA8-204ENST00000541225 WASHC2AQ641Q2 1341 aa7.14□□□□□ -1.27
ABCA8-204ENST00000541225 CEP170Q5SW79 1584 aa7.14□□□□□ -1.27
ABCA8-204ENST00000541225 CCDC144AA2RUR9 1427 aa7.14□□□□□ -1.27
ABCA8-204ENST00000541225 CLASP1Q7Z460 1538 aa7.13□□□□□ -1.27
ABCA8-204ENST00000541225 UGGT2Q9NYU1 1516 aa7.13□□□□□ -1.27
ABCA8-204ENST00000541225 KIF14Q15058 1648 aa7.13□□□□□ -1.27
ABCA8-204ENST00000541225 KDM5CP41229 1560 aa7.13□□□□□ -1.27
ABCA8-204ENST00000541225 MYOM3Q5VTT5 1437 aa7.12□□□□□ -1.27
ABCA8-204ENST00000541225 BCORL1Q5H9F3 1711 aa7.12□□□□□ -1.27
ABCA8-204ENST00000541225 TEX14Q8IWB6 1497 aa7.11□□□□□ -1.27
ABCA8-204ENST00000541225 FGD5Q6ZNL6 1462 aa7.11□□□□□ -1.27
ABCA8-204ENST00000541225 RNF17Q9BXT8 1623 aaKnown RBP7.11□□□□□ -1.27
ABCA8-204ENST00000541225 HFM1A2PYH4 1435 aa7.11□□□□□ -1.27
ABCA8-204ENST00000541225 WASHC2CQ9Y4E1 1318 aa7.11□□□□□ -1.27
ABCA8-204ENST00000541225 DAXXQ9UER7 740 aaPredicted RBP7.11□□□□□ -1.27
ABCA8-204ENST00000541225 GRIN2BQ13224 1484 aa7.1□□□□□ -1.27
ABCA8-204ENST00000541225 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.09□□□□□ -1.27
ABCA8-204ENST00000541225 NEURL4Q96JN8 1562 aa7.09□□□□□ -1.27
ABCA8-204ENST00000541225 DNMT1P26358 1616 aaKnown RBP7.07□□□□□ -1.28
ABCA8-204ENST00000541225 NCOA1Q15788 1441 aa7.07□□□□□ -1.28
ABCA8-204ENST00000541225 SUPT6HQ7KZ85 1726 aaKnown RBP7.06□□□□□ -1.28
ABCA8-204ENST00000541225 ITSN2Q9NZM3 1697 aa7.06□□□□□ -1.28
ABCA8-204ENST00000541225 PPRC1Q5VV67 1664 aaKnown RBP7.06□□□□□ -1.28
ABCA8-204ENST00000541225 KDM6BO15054 1643 aa7.06□□□□□ -1.28
ABCA8-204ENST00000541225 ABCC10Q5T3U5 1492 aa7.05□□□□□ -1.28
ABCA8-204ENST00000541225 CASKIN1Q8WXD9 1431 aa7.05□□□□□ -1.28
ABCA8-204ENST00000541225 UBE2Q2Q8WVN8 375 aa7.05□□□□□ -1.28
ABCA8-204ENST00000541225 RBM19Q9Y4C8 960 aaKnown RBP7.05□□□□□ -1.28
ABCA8-204ENST00000541225 CCNB3Q8WWL7 1395 aa7.05□□□□□ -1.28
ABCA8-204ENST00000541225 PLXNC1O60486 1568 aa7.04□□□□□ -1.28
ABCA8-204ENST00000541225 UACAQ9BZF9 1416 aa7.04□□□□□ -1.28
ABCA8-204ENST00000541225 ABCA10Q8WWZ4 1543 aa7.04□□□□□ -1.28
ABCA8-204ENST00000541225 ZNF608Q9ULD9 1512 aaPredicted RBP7.04□□□□□ -1.28
ABCA8-204ENST00000541225 EHBP1L1Q8N3D4 1523 aa7.03□□□□□ -1.28
ABCA8-204ENST00000541225 PBRM1Q86U86 1689 aa7.03□□□□□ -1.28
ABCA8-204ENST00000541225 MAGI3Q5TCQ9 1506 aa7.03□□□□□ -1.28
ABCA8-204ENST00000541225 SETD5Q9C0A6 1442 aa7.02□□□□□ -1.28
ABCA8-204ENST00000541225 CEP152O94986 1710 aa7.02□□□□□ -1.29
ABCA8-204ENST00000541225 UHRF1BP1Q6BDS2 1440 aa7.02□□□□□ -1.29
ABCA8-204ENST00000541225 ERICH6Q7L0X2 663 aa7.02□□□□□ -1.29
ABCA8-204ENST00000541225 ABCC2Q92887 1545 aa7.02□□□□□ -1.29
ABCA8-204ENST00000541225 IQGAP2Q13576 1575 aa7.02□□□□□ -1.29
ABCA8-204ENST00000541225 SMG6Q86US8 1419 aaKnown RBP7.02□□□□□ -1.29
ABCA8-204ENST00000541225 SENP3Q9H4L4 574 aaPredicted RBP7.02□□□□□ -1.29
ABCA8-204ENST00000541225 ARHGAP31Q2M1Z3 1444 aa7.01□□□□□ -1.29
ABCA8-204ENST00000541225 TRPM1Q7Z4N2 1603 aa7.01□□□□□ -1.29
ABCA8-204ENST00000541225 SCAPERQ9BY12 1400 aa7□□□□□ -1.29
ABCA8-204ENST00000541225 ADGRL2O95490 1459 aa7□□□□□ -1.29
ABCA8-204ENST00000541225 DNMBPQ6XZF7 1577 aa7□□□□□ -1.29
ABCA8-204ENST00000541225 MYOM1P52179 1685 aa7□□□□□ -1.29
ABCA8-204ENST00000541225 LRPPRCP42704 1394 aaKnown RBP6.99□□□□□ -1.29
ABCA8-204ENST00000541225 RAB3GAP2Q9H2M9 1393 aa6.99□□□□□ -1.29
ABCA8-204ENST00000541225 PTPRKQ15262 1439 aa6.99□□□□□ -1.29
ABCA8-204ENST00000541225 NESP48681 1621 aa6.99□□□□□ -1.29
ABCA8-204ENST00000541225 CDC42BPAQ5VT25 1732 aa6.99□□□□□ -1.29
ABCA8-204ENST00000541225 TARBP1Q13395 1621 aaKnown RBP6.99□□□□□ -1.29
ABCA8-204ENST00000541225 EIF4G3O43432 1585 aaKnown RBP6.98□□□□□ -1.29
ABCA8-204ENST00000541225 YEATS2Q9ULM3 1422 aa6.98□□□□□ -1.29
ABCA8-204ENST00000541225 CCER1Q8TC90 406 aaPredicted RBP6.98□□□□□ -1.29
ABCA8-204ENST00000541225 NAIPQ13075 1403 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms