RNA–Protein interactions for RNA: ENST00000541225.5

ABCA8-204, Transcript of ATP binding cassette subfamily A member 8, human

TSL 2

Gene ABCA8, Length 3,657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA8-204	ENST00000541225	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	5.32	□□□□□ -1.56	4e-7	■■■■■ 57.7
ABCA8-204	ENST00000541225	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	5.59	□□□□□ -1.52	1e-6	■■■■■ 47.2
ABCA8-204	ENST00000541225	SF3B4	Q15427	424 aa	Known RBP eCLIP	4.93	□□□□□ -1.62	1e-7	■■■■■ 32.4
ABCA8-204	ENST00000541225	KHSRP	Q92945	711 aa	Known RBP eCLIP	4.9	□□□□□ -1.62	9e-9	■■■■■ 27.2
ABCA8-204	ENST00000541225	TARDBP	Q13148	414 aa	Known RBP eCLIP	5	□□□□□ -1.61	2e-6	■■■■□ 21.9
ABCA8-204	ENST00000541225	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	2.85	□□□□□ -1.95	6e-6	■■■□□ 17.7
ABCA8-204	ENST00000541225	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	5.1	□□□□□ -1.59	4e-6	■■□□□ 13.6

Retrieved 7 of 7 RNA–protein pairs in 37.8 ms