RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 SHROOM2Q13796 1616 aa24.2■■□□□ 1.46
LTBR-209ENST00000541102 PRG4Q92954 1404 aaPredicted RBP24.19■■□□□ 1.46
LTBR-209ENST00000541102 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
LTBR-209ENST00000541102 KIAA0586Q9BVV6 1533 aa24.12■■□□□ 1.45
LTBR-209ENST00000541102 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
LTBR-209ENST00000541102 TTBK1Q5TCY1 1321 aaPredicted RBP23.97■■□□□ 1.43
LTBR-209ENST00000541102 CHIC1Q5VXU3 224 aa23.96■■□□□ 1.43
LTBR-209ENST00000541102 IQGAP2Q13576 1575 aa23.91■■□□□ 1.42
LTBR-209ENST00000541102 NPM1P06748 294 aaKnown RBP eCLIP23.9■■□□□ 1.42
LTBR-209ENST00000541102 CARMIL2Q6F5E8 1435 aa23.9■■□□□ 1.42
LTBR-209ENST00000541102 PTPRGP23470 1445 aa23.88■■□□□ 1.41
LTBR-209ENST00000541102 TNIKQ9UKE5 1360 aa23.84■■□□□ 1.41
LTBR-209ENST00000541102 CSRNP3Q8WYN3 585 aa23.84■■□□□ 1.41
LTBR-209ENST00000541102 PRXQ9BXM0 1461 aa23.83■■□□□ 1.41
LTBR-209ENST00000541102 FAM9AQ8IZU1 332 aaPredicted RBP23.81■■□□□ 1.4
LTBR-209ENST00000541102 ADCY10Q96PN6 1610 aa23.79■■□□□ 1.4
LTBR-209ENST00000541102 DISP1Q96F81 1524 aa23.79■■□□□ 1.4
LTBR-209ENST00000541102 UGGT2Q9NYU1 1516 aa23.77■■□□□ 1.4
LTBR-209ENST00000541102 CTTNBP2Q8WZ74 1663 aa23.73■■□□□ 1.39
LTBR-209ENST00000541102 EEA1Q15075 1411 aa23.71■■□□□ 1.39
LTBR-209ENST00000541102 FAM69CQ0P6D2 419 aa23.71■■□□□ 1.39
LTBR-209ENST00000541102 KIAA0556O60303 1618 aa23.69■■□□□ 1.38
LTBR-209ENST00000541102 UACAQ9BZF9 1416 aa23.67■■□□□ 1.38
LTBR-209ENST00000541102 MAPKBP1O60336 1514 aa23.67■■□□□ 1.38
LTBR-209ENST00000541102 GOLGA3Q08378 1498 aa23.65■■□□□ 1.38
LTBR-209ENST00000541102 ABCC10Q5T3U5 1492 aa23.65■■□□□ 1.38
LTBR-209ENST00000541102 KIF13AQ9H1H9 1805 aa23.64■■□□□ 1.38
LTBR-209ENST00000541102 ABCC2Q92887 1545 aa23.64■■□□□ 1.37
LTBR-209ENST00000541102 P3H3Q8IVL6 736 aa23.63■■□□□ 1.37
LTBR-209ENST00000541102 UHRF1BP1LA0JNW5 1464 aa23.62■■□□□ 1.37
LTBR-209ENST00000541102 RANGAP1P46060 587 aaPredicted RBP23.59■■□□□ 1.37
LTBR-209ENST00000541102 EHMT2Q96KQ7 1210 aa23.57■■□□□ 1.36
LTBR-209ENST00000541102 DIP2BQ9P265 1576 aa23.57■■□□□ 1.36
LTBR-209ENST00000541102 ASXL2Q76L83 1435 aa23.56■■□□□ 1.36
LTBR-209ENST00000541102 PLB1Q6P1J6 1458 aa23.54■■□□□ 1.36
LTBR-209ENST00000541102 KDM5BQ9UGL1 1544 aa23.52■■□□□ 1.36
LTBR-209ENST00000541102 ARID3CA6NKF2 412 aa23.46■■□□□ 1.35
LTBR-209ENST00000541102 KIF21BO75037 1637 aa23.46■■□□□ 1.35
LTBR-209ENST00000541102 UBTFP17480 764 aaKnown RBP23.46■■□□□ 1.35
LTBR-209ENST00000541102 ZCCHC11Q5TAX3 1644 aaKnown RBP23.46■■□□□ 1.35
LTBR-209ENST00000541102 ABCA8O94911 1581 aa23.45■■□□□ 1.34
LTBR-209ENST00000541102 TSPOAP1O95153 1857 aa23.45■■□□□ 1.34
LTBR-209ENST00000541102 SAMD9Q5K651 1589 aa23.41■■□□□ 1.34
LTBR-209ENST00000541102 KCNH8Q96L42 1107 aa23.4■■□□□ 1.34
LTBR-209ENST00000541102 EPRSP07814 1512 aaKnown RBP23.38■■□□□ 1.33
LTBR-209ENST00000541102 GLI2P10070 1586 aa23.38■■□□□ 1.33
LTBR-209ENST00000541102 FHOD3Q2V2M9 1422 aa23.37■■□□□ 1.33
LTBR-209ENST00000541102 WDR7Q9Y4E6 1490 aa23.36■■□□□ 1.33
LTBR-209ENST00000541102 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.33
LTBR-209ENST00000541102 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.33
LTBR-209ENST00000541102 ATP10BO94823 1461 aa23.31■■□□□ 1.32
LTBR-209ENST00000541102 KDM6BO15054 1643 aa23.3■■□□□ 1.32
LTBR-209ENST00000541102 RAPGEF6Q8TEU7 1601 aa23.28■■□□□ 1.32
LTBR-209ENST00000541102 EFCAB5A4FU69 1503 aa23.27■■□□□ 1.32
LTBR-209ENST00000541102 PPRC1Q5VV67 1664 aaKnown RBP23.26■■□□□ 1.31
LTBR-209ENST00000541102 MAP3K4Q9Y6R4 1608 aa23.26■■□□□ 1.31
LTBR-209ENST00000541102 CD109Q6YHK3 1445 aa23.22■■□□□ 1.31
LTBR-209ENST00000541102 AEBP2Q6ZN18 517 aaPredicted RBP23.21■■□□□ 1.31
LTBR-209ENST00000541102 NUP153P49790 1475 aaKnown RBP23.21■■□□□ 1.31
LTBR-209ENST00000541102 TEX14Q8IWB6 1497 aa23.21■■□□□ 1.31
LTBR-209ENST00000541102 ATP1B4Q9UN42 357 aaPredicted RBP23.19■■□□□ 1.3
LTBR-209ENST00000541102 ARHGAP35Q9NRY4 1499 aa23.17■■□□□ 1.3
LTBR-209ENST00000541102 PLEKHD1A6NEE1 506 aa23.15■■□□□ 1.3
LTBR-209ENST00000541102 COL17A1Q9UMD9 1497 aaPredicted RBP23.15■■□□□ 1.3
LTBR-209ENST00000541102 CFAP43Q8NDM7 1665 aa23.15■■□□□ 1.3
LTBR-209ENST00000541102 MAGI3Q5TCQ9 1506 aa23.13■■□□□ 1.29
LTBR-209ENST00000541102 FMN1Q68DA7 1419 aa23.1■■□□□ 1.29
LTBR-209ENST00000541102 CDK13Q14004 1512 aaKnown RBP23.05■■□□□ 1.28
LTBR-209ENST00000541102 LOC105371045A0A1W2PR82 267 aa23.05■■□□□ 1.28
LTBR-209ENST00000541102 ABCA9Q8IUA7 1624 aa23.04■■□□□ 1.28
LTBR-209ENST00000541102 HECW1Q76N89 1606 aa22.99■■□□□ 1.27
LTBR-209ENST00000541102 CDK11AQ9UQ88 783 aaPredicted RBP22.98■■□□□ 1.27
LTBR-209ENST00000541102 KDM4FA0A1W2PPD8 638 aa22.97■■□□□ 1.27
LTBR-209ENST00000541102 CLIP1P30622 1438 aa22.97■■□□□ 1.27
LTBR-209ENST00000541102 PHLDB1Q86UU1 1377 aa22.94■■□□□ 1.26
LTBR-209ENST00000541102 ARAP3Q8WWN8 1544 aa22.93■■□□□ 1.26
LTBR-209ENST00000541102 RAPGEF3O95398 923 aa22.93■■□□□ 1.26
LTBR-209ENST00000541102 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.92■■□□□ 1.26
LTBR-209ENST00000541102 NEO1Q92859 1461 aa22.92■■□□□ 1.26
LTBR-209ENST00000541102 CASKIN1Q8WXD9 1431 aa22.9■■□□□ 1.26
LTBR-209ENST00000541102 TTC37Q6PGP7 1564 aa22.89■■□□□ 1.25
LTBR-209ENST00000541102 PCF11O94913 1555 aaKnown RBP22.86■■□□□ 1.25
LTBR-209ENST00000541102 AKNAQ7Z591 1439 aa22.85■■□□□ 1.25
LTBR-209ENST00000541102 LRRIQ1Q96JM4 1722 aa22.85■■□□□ 1.25
LTBR-209ENST00000541102 FANCAO15360 1455 aa22.85■■□□□ 1.25
LTBR-209ENST00000541102 TROQ12816 1431 aaPredicted RBP22.84■■□□□ 1.25
LTBR-209ENST00000541102 ADGRL1O94910 1474 aa22.83■■□□□ 1.25
LTBR-209ENST00000541102 PLCH2O75038 1416 aa22.82■■□□□ 1.24
LTBR-209ENST00000541102 CCDC18Q5T9S5 1454 aa22.8■■□□□ 1.24
LTBR-209ENST00000541102 EFCAB2Q5VUJ9 269 aa22.8■■□□□ 1.24
LTBR-209ENST00000541102 DENND4BO75064 1496 aaPredicted RBP22.79■■□□□ 1.24
LTBR-209ENST00000541102 FYCO1Q9BQS8 1478 aa22.79■■□□□ 1.24
LTBR-209ENST00000541102 KIF14Q15058 1648 aa22.79■■□□□ 1.24
LTBR-209ENST00000541102 CEP162Q5TB80 1403 aa22.78■■□□□ 1.24
LTBR-209ENST00000541102 CFAP74Q9C0B2 1584 aa22.77■■□□□ 1.24
LTBR-209ENST00000541102 FRMPD1Q5SYB0 1578 aa22.75■■□□□ 1.23
LTBR-209ENST00000541102 SCAPERQ9BY12 1400 aa22.74■■□□□ 1.23
LTBR-209ENST00000541102 MYO5CQ9NQX4 1742 aa22.73■■□□□ 1.23
LTBR-209ENST00000541102 ARID4BQ4LE39 1312 aaPredicted RBP22.71■■□□□ 1.23
LTBR-209ENST00000541102 ARHGAP5Q13017 1502 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms