RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 CTTNBP2Q8WZ74 1663 aa31.22■■■□□ 2.59
LSM14A-202ENST00000540746 TDRD9Q8NDG6 1382 aaKnown RBP31.21■■■□□ 2.59
LSM14A-202ENST00000540746 FHAD1B1AJZ9 1412 aa31.2■■■□□ 2.59
LSM14A-202ENST00000540746 PCF11O94913 1555 aaKnown RBP31.2■■■□□ 2.59
LSM14A-202ENST00000540746 LRRC9Q6ZRR7 1453 aa31.17■■■□□ 2.58
LSM14A-202ENST00000540746 FHOD3Q2V2M9 1422 aa31.17■■■□□ 2.58
LSM14A-202ENST00000540746 DHX57Q6P158 1386 aaKnown RBP31.16■■■□□ 2.58
LSM14A-202ENST00000540746 EFCAB5A4FU69 1503 aa31.15■■■□□ 2.58
LSM14A-202ENST00000540746 ZNF316A6NFI3 1004 aaPredicted RBP31.15■■■□□ 2.58
LSM14A-202ENST00000540746 GAPVD1Q14C86 1478 aa31.14■■■□□ 2.58
LSM14A-202ENST00000540746 CFAP43Q8NDM7 1665 aa31.14■■■□□ 2.58
LSM14A-202ENST00000540746 TARBP1Q13395 1621 aaKnown RBP31.08■■■□□ 2.57
LSM14A-202ENST00000540746 CLSPNQ9HAW4 1339 aa31.06■■■□□ 2.56
LSM14A-202ENST00000540746 PHLDB1Q86UU1 1377 aa31.05■■■□□ 2.56
LSM14A-202ENST00000540746 FYCO1Q9BQS8 1478 aa31.05■■■□□ 2.56
LSM14A-202ENST00000540746 CASKIN1Q8WXD9 1431 aa31.02■■■□□ 2.56
LSM14A-202ENST00000540746 AQRO60306 1485 aaKnown RBP eCLIP31.02■■■□□ 2.562e-7■■■■□ 21.1
LSM14A-202ENST00000540746 ITGAEP38570 1179 aa31.02■■■□□ 2.56
LSM14A-202ENST00000540746 ATP1B4Q9UN42 357 aaPredicted RBP31■■■□□ 2.55
LSM14A-202ENST00000540746 SAMD9Q5K651 1589 aa30.95■■■□□ 2.55
LSM14A-202ENST00000540746 SNAPC4Q5SXM2 1469 aa30.93■■■□□ 2.54
LSM14A-202ENST00000540746 FMN1Q68DA7 1419 aa30.92■■■□□ 2.54
LSM14A-202ENST00000540746 PBRM1Q86U86 1689 aa30.87■■■□□ 2.53
LSM14A-202ENST00000540746 RAB3GAP2Q9H2M9 1393 aa30.87■■■□□ 2.53
LSM14A-202ENST00000540746 MRC2Q9UBG0 1479 aa30.87■■■□□ 2.53
LSM14A-202ENST00000540746 LRRIQ1Q96JM4 1722 aa30.83■■■□□ 2.53
LSM14A-202ENST00000540746 FAM50AQ14320 339 aaKnown RBP30.82■■■□□ 2.52
LSM14A-202ENST00000540746 SCAF1Q9H7N4 1312 aaKnown RBP30.79■■■□□ 2.52
LSM14A-202ENST00000540746 SETD5Q9C0A6 1442 aa30.78■■■□□ 2.52
LSM14A-202ENST00000540746 GRIN2BQ13224 1484 aa30.76■■■□□ 2.51
LSM14A-202ENST00000540746 ADAMTS12P58397 1594 aa30.75■■■□□ 2.51
LSM14A-202ENST00000540746 MAPKBP1O60336 1514 aa30.73■■■□□ 2.51
LSM14A-202ENST00000540746 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.69■■■□□ 2.5
LSM14A-202ENST00000540746 NEUROD1Q13562 356 aa30.68■■■□□ 2.5
LSM14A-202ENST00000540746 MTUS2Q5JR59 1369 aa30.67■■■□□ 2.5
LSM14A-202ENST00000540746 THOC2Q8NI27 1593 aaKnown RBP30.67■■■□□ 2.5
LSM14A-202ENST00000540746 ACIN1Q9UKV3 1341 aaKnown RBP30.67■■■□□ 2.5
LSM14A-202ENST00000540746 WDR62O43379 1518 aa30.67■■■□□ 2.5
LSM14A-202ENST00000540746 ZNF608Q9ULD9 1512 aaPredicted RBP30.67■■■□□ 2.5
LSM14A-202ENST00000540746 FGD6Q6ZV73 1430 aa30.66■■■□□ 2.5
LSM14A-202ENST00000540746 IQGAP2Q13576 1575 aa30.65■■■□□ 2.5
LSM14A-202ENST00000540746 MIER1Q8N108 512 aa30.64■■■□□ 2.49
LSM14A-202ENST00000540746 IFT140Q96RY7 1462 aa30.63■■■□□ 2.49
LSM14A-202ENST00000540746 NCOA2Q15596 1464 aa30.58■■■□□ 2.49
LSM14A-202ENST00000540746 MAGI3Q5TCQ9 1506 aa30.55■■■□□ 2.48
LSM14A-202ENST00000540746 EHBP1L1Q8N3D4 1523 aa30.54■■■□□ 2.48
LSM14A-202ENST00000540746 SUPT6HQ7KZ85 1726 aaKnown RBP30.54■■■□□ 2.48
LSM14A-202ENST00000540746 CENPBP07199 599 aaPredicted RBP30.52■■■□□ 2.48
LSM14A-202ENST00000540746 MYOM3Q5VTT5 1437 aa30.52■■■□□ 2.48
LSM14A-202ENST00000540746 PTPRKQ15262 1439 aa30.5■■■□□ 2.47
LSM14A-202ENST00000540746 CCDC18Q5T9S5 1454 aa30.49■■■□□ 2.47
LSM14A-202ENST00000540746 HECW1Q76N89 1606 aa30.49■■■□□ 2.47
LSM14A-202ENST00000540746 ARHGEF11O15085 1522 aa30.48■■■□□ 2.47
LSM14A-202ENST00000540746 UGGT2Q9NYU1 1516 aa30.48■■■□□ 2.47
LSM14A-202ENST00000540746 EIF4G3O43432 1585 aaKnown RBP30.46■■■□□ 2.47
LSM14A-202ENST00000540746 EPRSP07814 1512 aaKnown RBP30.44■■■□□ 2.46
LSM14A-202ENST00000540746 SIN3AQ96ST3 1273 aa30.43■■■□□ 2.46
LSM14A-202ENST00000540746 ERCC6Q03468 1493 aa30.41■■■□□ 2.46
LSM14A-202ENST00000540746 KIAA0586Q9BVV6 1533 aa30.4■■■□□ 2.46
LSM14A-202ENST00000540746 PTPN23Q9H3S7 1636 aa30.39■■■□□ 2.46
LSM14A-202ENST00000540746 HFM1A2PYH4 1435 aa30.39■■■□□ 2.46
LSM14A-202ENST00000540746 CDK13Q14004 1512 aaKnown RBP30.39■■■□□ 2.45
LSM14A-202ENST00000540746 YTHDC1Q96MU7 727 aaKnown RBP30.38■■■□□ 2.45
LSM14A-202ENST00000540746 GRIN2AQ12879 1464 aa30.37■■■□□ 2.45
LSM14A-202ENST00000540746 DISP1Q96F81 1524 aa30.36■■■□□ 2.45
LSM14A-202ENST00000540746 KIAA0556O60303 1618 aa30.34■■■□□ 2.45
LSM14A-202ENST00000540746 NAIPQ13075 1403 aa30.32■■■□□ 2.44
LSM14A-202ENST00000540746 ARID3CA6NKF2 412 aa30.29■■■□□ 2.44
LSM14A-202ENST00000540746 TCOF1Q13428 1488 aaKnown RBP30.29■■■□□ 2.44
LSM14A-202ENST00000540746 GTF3C3Q9Y5Q9 886 aa30.27■■■□□ 2.44
LSM14A-202ENST00000540746 UACAQ9BZF9 1416 aa30.26■■■□□ 2.43
LSM14A-202ENST00000540746 MAGI1Q96QZ7 1491 aaPredicted RBP30.25■■■□□ 2.43
LSM14A-202ENST00000540746 TIMELESSQ9UNS1 1208 aa30.23■■■□□ 2.43
LSM14A-202ENST00000540746 NUP153P49790 1475 aaKnown RBP30.2■■■□□ 2.43
LSM14A-202ENST00000540746 CEP170Q5SW79 1584 aa30.2■■■□□ 2.43
LSM14A-202ENST00000540746 SYNJ2O15056 1496 aa30.19■■■□□ 2.42
LSM14A-202ENST00000540746 MIA2Q96PC5 1412 aa30.17■■■□□ 2.42
LSM14A-202ENST00000540746 RAPGEF6Q8TEU7 1601 aa30.17■■■□□ 2.42
LSM14A-202ENST00000540746 CHMP7Q8WUX9 453 aaPredicted RBP30.15■■■□□ 2.42
LSM14A-202ENST00000540746 PPP1R15AO75807 674 aaPredicted RBP30.14■■■□□ 2.41
LSM14A-202ENST00000540746 CHIC2Q9UKJ5 165 aa30.14■■■□□ 2.41
LSM14A-202ENST00000540746 GCC2Q8IWJ2 1684 aa30.13■■■□□ 2.41
LSM14A-202ENST00000540746 RRP7BPQ9NSQ0 103 aa30.13■■■□□ 2.41
LSM14A-202ENST00000540746 KDM6BO15054 1643 aa30.08■■■□□ 2.41
LSM14A-202ENST00000540746 AKNAQ7Z591 1439 aa30.07■■■□□ 2.41
LSM14A-202ENST00000540746 FBLN2P98095 1184 aa30.07■■■□□ 2.4
LSM14A-202ENST00000540746 NUP160Q12769 1436 aa30.05■■■□□ 2.4
LSM14A-202ENST00000540746 PLB1Q6P1J6 1458 aa30.02■■■□□ 2.4
LSM14A-202ENST00000540746 TONSLQ96HA7 1378 aa30.02■■■□□ 2.4
LSM14A-202ENST00000540746 DENND4BO75064 1496 aaPredicted RBP30.02■■■□□ 2.4
LSM14A-202ENST00000540746 JPH4Q96JJ6 628 aa29.97■■■□□ 2.39
LSM14A-202ENST00000540746 CDK11AQ9UQ88 783 aaPredicted RBP29.97■■■□□ 2.39
LSM14A-202ENST00000540746 PRG4Q92954 1404 aaPredicted RBP29.96■■■□□ 2.39
LSM14A-202ENST00000540746 ZNF644Q9H582 1327 aaPredicted RBP29.96■■■□□ 2.39
LSM14A-202ENST00000540746 DAPK1P53355 1430 aa29.96■■■□□ 2.39
LSM14A-202ENST00000540746 DNMT1P26358 1616 aaKnown RBP29.95■■■□□ 2.39
LSM14A-202ENST00000540746 KDM5BQ9UGL1 1544 aa29.95■■■□□ 2.39
LSM14A-202ENST00000540746 ABCC5O15440 1437 aa29.93■■■□□ 2.38
LSM14A-202ENST00000540746 TROQ12816 1431 aaPredicted RBP29.93■■■□□ 2.38
LSM14A-202ENST00000540746 HIRIP3Q9BW71 556 aaPredicted RBP29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms