RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
EPB41L3-204ENST00000540638 TOPBP1Q92547 1522 aa24.79■■□□□ 1.56
EPB41L3-204ENST00000540638 SIN3AQ96ST3 1273 aa24.78■■□□□ 1.56
EPB41L3-204ENST00000540638 DHX57Q6P158 1386 aaKnown RBP24.77■■□□□ 1.56
EPB41L3-204ENST00000540638 HIRIP3Q9BW71 556 aaPredicted RBP24.77■■□□□ 1.56
EPB41L3-204ENST00000540638 CHIC2Q9UKJ5 165 aa24.76■■□□□ 1.55
EPB41L3-204ENST00000540638 MTUS2Q5JR59 1369 aa24.75■■□□□ 1.55
EPB41L3-204ENST00000540638 PDS5BQ9NTI5 1447 aa24.73■■□□□ 1.55
EPB41L3-204ENST00000540638 RAB3GAP2Q9H2M9 1393 aa24.7■■□□□ 1.55
EPB41L3-204ENST00000540638 PHLDB1Q86UU1 1377 aa24.7■■□□□ 1.54
EPB41L3-204ENST00000540638 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.54
EPB41L3-204ENST00000540638 TRIM52Q96A61 297 aa24.64■■□□□ 1.54
EPB41L3-204ENST00000540638 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
EPB41L3-204ENST00000540638 URB2Q14146 1524 aaKnown RBP24.62■■□□□ 1.53
EPB41L3-204ENST00000540638 RRP7BPQ9NSQ0 103 aa24.61■■□□□ 1.53
EPB41L3-204ENST00000540638 GAPVD1Q14C86 1478 aa24.6■■□□□ 1.53
EPB41L3-204ENST00000540638 AQRO60306 1485 aaKnown RBP eCLIP24.59■■□□□ 1.53
EPB41L3-204ENST00000540638 RRBP1Q9P2E9 1410 aaKnown RBP24.58■■□□□ 1.53
EPB41L3-204ENST00000540638 LRRC9Q6ZRR7 1453 aa24.57■■□□□ 1.52
EPB41L3-204ENST00000540638 ABCA10Q8WWZ4 1543 aa24.56■■□□□ 1.52
EPB41L3-204ENST00000540638 SETD5Q9C0A6 1442 aa24.53■■□□□ 1.52
EPB41L3-204ENST00000540638 DDX10Q13206 875 aaKnown RBP24.53■■□□□ 1.52
EPB41L3-204ENST00000540638 TIAM1Q13009 1591 aa24.5■■□□□ 1.51
EPB41L3-204ENST00000540638 CLSPNQ9HAW4 1339 aa24.49■■□□□ 1.51
EPB41L3-204ENST00000540638 ZNF777Q9ULD5 760 aaPredicted RBP24.48■■□□□ 1.51
EPB41L3-204ENST00000540638 CHMP7Q8WUX9 453 aaPredicted RBP24.48■■□□□ 1.51
EPB41L3-204ENST00000540638 PCF11O94913 1555 aaKnown RBP24.46■■□□□ 1.51
EPB41L3-204ENST00000540638 FMN1Q68DA7 1419 aa24.46■■□□□ 1.51
EPB41L3-204ENST00000540638 PRDM2Q13029 1718 aa24.46■■□□□ 1.51
EPB41L3-204ENST00000540638 ERCC6Q03468 1493 aa24.42■■□□□ 1.5
EPB41L3-204ENST00000540638 LAMC3Q9Y6N6 1575 aa24.41■■□□□ 1.5
EPB41L3-204ENST00000540638 CNGB1Q14028 1251 aaPredicted RBP24.41■■□□□ 1.5
EPB41L3-204ENST00000540638 CASKIN1Q8WXD9 1431 aa24.36■■□□□ 1.49
EPB41L3-204ENST00000540638 TONSLQ96HA7 1378 aa24.36■■□□□ 1.49
EPB41L3-204ENST00000540638 FOXD1Q16676 465 aa24.34■■□□□ 1.49
EPB41L3-204ENST00000540638 KCNH8Q96L42 1107 aa24.32■■□□□ 1.48
EPB41L3-204ENST00000540638 FYCO1Q9BQS8 1478 aa24.29■■□□□ 1.48
EPB41L3-204ENST00000540638 FGD6Q6ZV73 1430 aa24.28■■□□□ 1.48
EPB41L3-204ENST00000540638 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
EPB41L3-204ENST00000540638 POLR3GLQ9BT43 218 aa24.27■■□□□ 1.48
EPB41L3-204ENST00000540638 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
EPB41L3-204ENST00000540638 ZNF326Q5BKZ1 582 aaKnown RBP24.25■■□□□ 1.47
EPB41L3-204ENST00000540638 CUL7Q14999 1698 aa24.22■■□□□ 1.47
EPB41L3-204ENST00000540638 EFCAB5A4FU69 1503 aa24.22■■□□□ 1.47
EPB41L3-204ENST00000540638 CDK11AQ9UQ88 783 aaPredicted RBP24.22■■□□□ 1.47
EPB41L3-204ENST00000540638 NCOA2Q15596 1464 aa24.21■■□□□ 1.47
EPB41L3-204ENST00000540638 ZNF644Q9H582 1327 aaPredicted RBP24.21■■□□□ 1.47
EPB41L3-204ENST00000540638 MRC2Q9UBG0 1479 aa24.18■■□□□ 1.46
EPB41L3-204ENST00000540638 PPP1R15AO75807 674 aaPredicted RBP24.17■■□□□ 1.46
EPB41L3-204ENST00000540638 BCANQ96GW7 911 aa24.15■■□□□ 1.46
EPB41L3-204ENST00000540638 MAP3K1Q13233 1512 aa24.14■■□□□ 1.45
EPB41L3-204ENST00000540638 CCDC18Q5T9S5 1454 aa24.14■■□□□ 1.45
EPB41L3-204ENST00000540638 MYOM3Q5VTT5 1437 aa24.13■■□□□ 1.45
EPB41L3-204ENST00000540638 ANP32CO43423 234 aa24.13■■□□□ 1.45
EPB41L3-204ENST00000540638 CFDP1Q9UEE9 299 aaPredicted RBP24.13■■□□□ 1.45
EPB41L3-204ENST00000540638 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
EPB41L3-204ENST00000540638 CDK13Q14004 1512 aaKnown RBP24.12■■□□□ 1.45
EPB41L3-204ENST00000540638 PTPRKQ15262 1439 aa24.12■■□□□ 1.45
EPB41L3-204ENST00000540638 MAPKBP1O60336 1514 aa24.1■■□□□ 1.45
EPB41L3-204ENST00000540638 SLC4A1APQ9BWU0 796 aaKnown RBP24.1■■□□□ 1.45
EPB41L3-204ENST00000540638 CTTNBP2Q8WZ74 1663 aa24.09■■□□□ 1.45
EPB41L3-204ENST00000540638 SNAPC4Q5SXM2 1469 aa24.08■■□□□ 1.45
EPB41L3-204ENST00000540638 JPH4Q96JJ6 628 aa24.08■■□□□ 1.44
EPB41L3-204ENST00000540638 WDR97A6NE52 1622 aa24.07■■□□□ 1.44
EPB41L3-204ENST00000540638 ABCA5Q8WWZ7 1642 aa24.06■■□□□ 1.44
EPB41L3-204ENST00000540638 MPHOSPH9Q99550 1183 aa24.03■■□□□ 1.44
EPB41L3-204ENST00000540638 CFAP43Q8NDM7 1665 aa24.01■■□□□ 1.43
EPB41L3-204ENST00000540638 PLEKHD1A6NEE1 506 aa24.01■■□□□ 1.43
EPB41L3-204ENST00000540638 IQGAP2Q13576 1575 aa24■■□□□ 1.43
EPB41L3-204ENST00000540638 EPRSP07814 1512 aaKnown RBP23.98■■□□□ 1.43
EPB41L3-204ENST00000540638 IFT140Q96RY7 1462 aa23.97■■□□□ 1.43
EPB41L3-204ENST00000540638 NAIPQ13075 1403 aa23.97■■□□□ 1.43
EPB41L3-204ENST00000540638 TARBP1Q13395 1621 aaKnown RBP23.97■■□□□ 1.43
EPB41L3-204ENST00000540638 L3MBTL2Q969R5 705 aa23.94■■□□□ 1.42
EPB41L3-204ENST00000540638 UACAQ9BZF9 1416 aa23.93■■□□□ 1.42
EPB41L3-204ENST00000540638 HFM1A2PYH4 1435 aa23.93■■□□□ 1.42
EPB41L3-204ENST00000540638 TIMELESSQ9UNS1 1208 aa23.92■■□□□ 1.42
EPB41L3-204ENST00000540638 PRG4Q92954 1404 aaPredicted RBP23.92■■□□□ 1.42
EPB41L3-204ENST00000540638 MAGI3Q5TCQ9 1506 aa23.91■■□□□ 1.42
EPB41L3-204ENST00000540638 EHBP1L1Q8N3D4 1523 aa23.91■■□□□ 1.42
EPB41L3-204ENST00000540638 HSPA5P11021 654 aaKnown RBP23.91■■□□□ 1.42
EPB41L3-204ENST00000540638 KDM2AQ9Y2K7 1162 aa23.91■■□□□ 1.42
EPB41L3-204ENST00000540638 SUPT6HQ7KZ85 1726 aaKnown RBP23.89■■□□□ 1.42
EPB41L3-204ENST00000540638 PELP1Q8IZL8 1130 aaKnown RBP23.89■■□□□ 1.42
EPB41L3-204ENST00000540638 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.89■■□□□ 1.42
EPB41L3-204ENST00000540638 SENP3-EIF4A1A0A087X0R7 540 aa23.89■■□□□ 1.41
EPB41L3-204ENST00000540638 EIF4G2P78344 907 aaKnown RBP eCLIP23.88■■□□□ 1.41
EPB41L3-204ENST00000540638 THOC2Q8NI27 1593 aaKnown RBP23.88■■□□□ 1.41
EPB41L3-204ENST00000540638 MYT1LQ9UL68 1186 aa23.88■■□□□ 1.41
EPB41L3-204ENST00000540638 PLB1Q6P1J6 1458 aa23.87■■□□□ 1.41
EPB41L3-204ENST00000540638 TSPY4P0CV99 314 aa23.86■■□□□ 1.41
EPB41L3-204ENST00000540638 TSPY10P0CW01 314 aa23.86■■□□□ 1.41
EPB41L3-204ENST00000540638 SAMD9Q5K651 1589 aa23.86■■□□□ 1.41
EPB41L3-204ENST00000540638 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.86■■□□□ 1.41
EPB41L3-204ENST00000540638 PTPN23Q9H3S7 1636 aa23.85■■□□□ 1.41
EPB41L3-204ENST00000540638 NEFLP07196 543 aa23.85■■□□□ 1.41
EPB41L3-204ENST00000540638 KIAA0586Q9BVV6 1533 aa23.85■■□□□ 1.41
EPB41L3-204ENST00000540638 HNRNPMP52272 730 aaKnown RBP eCLIP23.85■■□□□ 1.41
EPB41L3-204ENST00000540638 ADAMTS12P58397 1594 aa23.84■■□□□ 1.41
EPB41L3-204ENST00000540638 GRIN2AQ12879 1464 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms