RNA–Protein interactions for RNA: ENST00000540504.2

PSMD3-204, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 3

Gene PSMD3, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-204ENST00000540504 RUSC2Q8N2Y8 1516 aa29.1■■■□□ 2.25
PSMD3-204ENST00000540504 CUL7Q14999 1698 aa29.09■■■□□ 2.25
PSMD3-204ENST00000540504 KIAA0586Q9BVV6 1533 aa28.99■■■□□ 2.23
PSMD3-204ENST00000540504 CARMIL1Q5VZK9 1371 aa28.92■■■□□ 2.22
PSMD3-204ENST00000540504 NPM1P06748 294 aaKnown RBP eCLIP28.79■■■□□ 2.2
PSMD3-204ENST00000540504 KIF13AQ9H1H9 1805 aa28.75■■■□□ 2.19
PSMD3-204ENST00000540504 ADCY10Q96PN6 1610 aa28.74■■■□□ 2.19
PSMD3-204ENST00000540504 MAPKBP1O60336 1514 aa28.73■■■□□ 2.19
PSMD3-204ENST00000540504 IQGAP2Q13576 1575 aa28.71■■■□□ 2.19
PSMD3-204ENST00000540504 CARMIL2Q6F5E8 1435 aa28.71■■■□□ 2.19
PSMD3-204ENST00000540504 RAPGEF2Q9Y4G8 1499 aa28.68■■■□□ 2.18
PSMD3-204ENST00000540504 PTPRGP23470 1445 aa28.68■■■□□ 2.18
PSMD3-204ENST00000540504 ABCC10Q5T3U5 1492 aa28.67■■■□□ 2.18
PSMD3-204ENST00000540504 TNIKQ9UKE5 1360 aa28.65■■■□□ 2.18
PSMD3-204ENST00000540504 FAM69CQ0P6D2 419 aa28.61■■■□□ 2.17
PSMD3-204ENST00000540504 DIP2BQ9P265 1576 aa28.58■■■□□ 2.17
PSMD3-204ENST00000540504 DISP1Q96F81 1524 aa28.55■■■□□ 2.16
PSMD3-204ENST00000540504 UGGT2Q9NYU1 1516 aa28.55■■■□□ 2.16
PSMD3-204ENST00000540504 TTBK1Q5TCY1 1321 aaPredicted RBP28.52■■■□□ 2.16
PSMD3-204ENST00000540504 ABCC2Q92887 1545 aa28.52■■■□□ 2.16
PSMD3-204ENST00000540504 UHRF1BP1LA0JNW5 1464 aa28.5■■■□□ 2.15
PSMD3-204ENST00000540504 UACAQ9BZF9 1416 aa28.47■■■□□ 2.15
PSMD3-204ENST00000540504 CTTNBP2Q8WZ74 1663 aa28.45■■■□□ 2.15
PSMD3-204ENST00000540504 KIAA0556O60303 1618 aa28.44■■■□□ 2.14
PSMD3-204ENST00000540504 PLB1Q6P1J6 1458 aa28.41■■■□□ 2.14
PSMD3-204ENST00000540504 PRXQ9BXM0 1461 aa28.41■■■□□ 2.14
PSMD3-204ENST00000540504 AEBP2Q6ZN18 517 aaPredicted RBP28.41■■■□□ 2.14
PSMD3-204ENST00000540504 ASXL2Q76L83 1435 aa28.38■■■□□ 2.13
PSMD3-204ENST00000540504 KDM5BQ9UGL1 1544 aa28.36■■■□□ 2.13
PSMD3-204ENST00000540504 GOLGA3Q08378 1498 aa28.35■■■□□ 2.13
PSMD3-204ENST00000540504 TSPOAP1O95153 1857 aa28.35■■■□□ 2.13
PSMD3-204ENST00000540504 GLI2P10070 1586 aa28.33■■■□□ 2.13
PSMD3-204ENST00000540504 KDM6BO15054 1643 aa28.32■■■□□ 2.12
PSMD3-204ENST00000540504 ZCCHC11Q5TAX3 1644 aaKnown RBP28.27■■■□□ 2.12
PSMD3-204ENST00000540504 CSRNP3Q8WYN3 585 aa28.23■■■□□ 2.11
PSMD3-204ENST00000540504 EPRSP07814 1512 aaKnown RBP28.22■■■□□ 2.11
PSMD3-204ENST00000540504 PPRC1Q5VV67 1664 aaKnown RBP28.19■■■□□ 2.1
PSMD3-204ENST00000540504 EEA1Q15075 1411 aa28.19■■■□□ 2.1
PSMD3-204ENST00000540504 ABCA8O94911 1581 aa28.18■■■□□ 2.1
PSMD3-204ENST00000540504 MAP3K4Q9Y6R4 1608 aa28.16■■■□□ 2.1
PSMD3-204ENST00000540504 WDR7Q9Y4E6 1490 aa28.15■■■□□ 2.1
PSMD3-204ENST00000540504 FAM9AQ8IZU1 332 aaPredicted RBP28.14■■■□□ 2.1
PSMD3-204ENST00000540504 TEX14Q8IWB6 1497 aa28.1■■■□□ 2.09
PSMD3-204ENST00000540504 SAMD9Q5K651 1589 aa28.04■■■□□ 2.08
PSMD3-204ENST00000540504 P3H3Q8IVL6 736 aa28.01■■■□□ 2.07
PSMD3-204ENST00000540504 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
PSMD3-204ENST00000540504 COL17A1Q9UMD9 1497 aaPredicted RBP27.96■■■□□ 2.07
PSMD3-204ENST00000540504 MAGI3Q5TCQ9 1506 aa27.96■■■□□ 2.07
PSMD3-204ENST00000540504 CD109Q6YHK3 1445 aa27.95■■■□□ 2.07
PSMD3-204ENST00000540504 KCNH8Q96L42 1107 aa27.95■■■□□ 2.06
PSMD3-204ENST00000540504 ATP10BO94823 1461 aa27.94■■■□□ 2.06
PSMD3-204ENST00000540504 KDM4FA0A1W2PPD8 638 aa27.93■■■□□ 2.06
PSMD3-204ENST00000540504 KIF21BO75037 1637 aa27.92■■■□□ 2.06
PSMD3-204ENST00000540504 RAPGEF6Q8TEU7 1601 aa27.91■■■□□ 2.06
PSMD3-204ENST00000540504 ARID3CA6NKF2 412 aa27.85■■■□□ 2.05
PSMD3-204ENST00000540504 EFCAB5A4FU69 1503 aa27.82■■■□□ 2.04
PSMD3-204ENST00000540504 FHOD3Q2V2M9 1422 aa27.81■■■□□ 2.04
PSMD3-204ENST00000540504 RANGAP1P46060 587 aaPredicted RBP27.8■■■□□ 2.04
PSMD3-204ENST00000540504 ABCA9Q8IUA7 1624 aa27.79■■■□□ 2.04
PSMD3-204ENST00000540504 NUP153P49790 1475 aaKnown RBP27.78■■■□□ 2.04
PSMD3-204ENST00000540504 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
PSMD3-204ENST00000540504 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.76■■■□□ 2.03
PSMD3-204ENST00000540504 HNRNPUL2Q1KMD3 747 aaKnown RBP27.76■■■□□ 2.03
PSMD3-204ENST00000540504 ADGRL1O94910 1474 aa27.76■■■□□ 2.03
PSMD3-204ENST00000540504 PHLDB1Q86UU1 1377 aa27.74■■■□□ 2.03
PSMD3-204ENST00000540504 ARAP3Q8WWN8 1544 aa27.73■■■□□ 2.03
PSMD3-204ENST00000540504 UBTFP17480 764 aaKnown RBP27.67■■■□□ 2.02
PSMD3-204ENST00000540504 PLEKHD1A6NEE1 506 aa27.66■■■□□ 2.02
PSMD3-204ENST00000540504 NEO1Q92859 1461 aa27.65■■■□□ 2.02
PSMD3-204ENST00000540504 FMN1Q68DA7 1419 aa27.57■■■□□ 2
PSMD3-204ENST00000540504 EHMT2Q96KQ7 1210 aa27.56■■■□□ 2
PSMD3-204ENST00000540504 ARHGAP35Q9NRY4 1499 aa27.54■■■□□ 2
PSMD3-204ENST00000540504 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.51■■■□□ 2
PSMD3-204ENST00000540504 HECW1Q76N89 1606 aa27.5■■□□□ 1.99
PSMD3-204ENST00000540504 RAPGEF3O95398 923 aa27.5■■□□□ 1.99
PSMD3-204ENST00000540504 CFAP74Q9C0B2 1584 aa27.5■■□□□ 1.99
PSMD3-204ENST00000540504 CDK13Q14004 1512 aaKnown RBP27.5■■□□□ 1.99
PSMD3-204ENST00000540504 FRMPD1Q5SYB0 1578 aa27.47■■□□□ 1.99
PSMD3-204ENST00000540504 FANCAO15360 1455 aa27.46■■□□□ 1.99
PSMD3-204ENST00000540504 TTC37Q6PGP7 1564 aa27.45■■□□□ 1.99
PSMD3-204ENST00000540504 AKNAQ7Z591 1439 aa27.45■■□□□ 1.98
PSMD3-204ENST00000540504 DENND4BO75064 1496 aaPredicted RBP27.44■■□□□ 1.98
PSMD3-204ENST00000540504 ATP1B4Q9UN42 357 aaPredicted RBP27.42■■□□□ 1.98
PSMD3-204ENST00000540504 CDK11AQ9UQ88 783 aaPredicted RBP27.42■■□□□ 1.98
PSMD3-204ENST00000540504 RICTORQ6R327 1708 aa27.4■■□□□ 1.98
PSMD3-204ENST00000540504 PLCH2O75038 1416 aa27.37■■□□□ 1.97
PSMD3-204ENST00000540504 ADAMTSL3P82987 1691 aa27.34■■□□□ 1.97
PSMD3-204ENST00000540504 ARHGEF40Q8TER5 1519 aa27.34■■□□□ 1.97
PSMD3-204ENST00000540504 HECW2Q9P2P5 1572 aa27.33■■□□□ 1.97
PSMD3-204ENST00000540504 ZMYM4Q5VZL5 1548 aa27.32■■□□□ 1.96
PSMD3-204ENST00000540504 MYO5CQ9NQX4 1742 aa27.31■■□□□ 1.96
PSMD3-204ENST00000540504 TROQ12816 1431 aaPredicted RBP27.31■■□□□ 1.96
PSMD3-204ENST00000540504 KIF14Q15058 1648 aa27.3■■□□□ 1.96
PSMD3-204ENST00000540504 BCORL1Q5H9F3 1711 aa27.3■■□□□ 1.96
PSMD3-204ENST00000540504 CLIP1P30622 1438 aa27.29■■□□□ 1.96
PSMD3-204ENST00000540504 MAGI2Q86UL8 1455 aa27.29■■□□□ 1.96
PSMD3-204ENST00000540504 LRRIQ1Q96JM4 1722 aa27.28■■□□□ 1.96
PSMD3-204ENST00000540504 ARID4BQ4LE39 1312 aaPredicted RBP27.28■■□□□ 1.96
PSMD3-204ENST00000540504 EFCAB2Q5VUJ9 269 aa27.27■■□□□ 1.96
PSMD3-204ENST00000540504 SCAPERQ9BY12 1400 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms