RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 TSPOAP1O95153 1857 aa20.11■□□□□ 0.81
TMEM258-205ENST00000540434 NPM1P06748 294 aaKnown RBP eCLIP20.08■□□□□ 0.81
TMEM258-205ENST00000540434 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
TMEM258-205ENST00000540434 MAPKBP1O60336 1514 aa20.06■□□□□ 0.8
TMEM258-205ENST00000540434 JPH4Q96JJ6 628 aa20.04■□□□□ 0.8
TMEM258-205ENST00000540434 ADGRL1O94910 1474 aa20.04■□□□□ 0.8
TMEM258-205ENST00000540434 HECW2Q9P2P5 1572 aa20.04■□□□□ 0.8
TMEM258-205ENST00000540434 WRNQ14191 1432 aaPredicted RBP eCLIP20.02■□□□□ 0.89e-6■■■■■ 50.1
TMEM258-205ENST00000540434 ADCY10Q96PN6 1610 aa20.02■□□□□ 0.79
TMEM258-205ENST00000540434 ERICH3Q5RHP9 1530 aa19.98■□□□□ 0.79
TMEM258-205ENST00000540434 BIVM-ERCC5R4GMW8 1640 aa19.96■□□□□ 0.79
TMEM258-205ENST00000540434 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
TMEM258-205ENST00000540434 RUSC2Q8N2Y8 1516 aa19.88■□□□□ 0.77
TMEM258-205ENST00000540434 FBXO41Q8TF61 875 aa19.87■□□□□ 0.77
TMEM258-205ENST00000540434 PPRC1Q5VV67 1664 aaKnown RBP19.84■□□□□ 0.77
TMEM258-205ENST00000540434 COL17A1Q9UMD9 1497 aaPredicted RBP19.84■□□□□ 0.77
TMEM258-205ENST00000540434 TTBK1Q5TCY1 1321 aaPredicted RBP19.83■□□□□ 0.77
TMEM258-205ENST00000540434 ASXL2Q76L83 1435 aa19.73■□□□□ 0.75
TMEM258-205ENST00000540434 KIAA0586Q9BVV6 1533 aa19.72■□□□□ 0.75
TMEM258-205ENST00000540434 GLI2P10070 1586 aa19.7■□□□□ 0.74
TMEM258-205ENST00000540434 PTPRGP23470 1445 aa19.68■□□□□ 0.74
TMEM258-205ENST00000540434 ABCC2Q92887 1545 aa19.66■□□□□ 0.74
TMEM258-205ENST00000540434 PLB1Q6P1J6 1458 aa19.65■□□□□ 0.74
TMEM258-205ENST00000540434 CUL7Q14999 1698 aa19.63■□□□□ 0.73
TMEM258-205ENST00000540434 IGF1RP08069 1367 aa19.63■□□□□ 0.73
TMEM258-205ENST00000540434 LMTK3Q96Q04 1460 aa19.62■□□□□ 0.73
TMEM258-205ENST00000540434 MAP3K4Q9Y6R4 1608 aa19.59■□□□□ 0.73
TMEM258-205ENST00000540434 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
TMEM258-205ENST00000540434 TNIKQ9UKE5 1360 aa19.56■□□□□ 0.72
TMEM258-205ENST00000540434 ILDR2Q71H61 639 aa19.54■□□□□ 0.72
TMEM258-205ENST00000540434 UHRF1BP1LA0JNW5 1464 aa19.54■□□□□ 0.72
TMEM258-205ENST00000540434 TEX14Q8IWB6 1497 aa19.54■□□□□ 0.72
TMEM258-205ENST00000540434 CARMIL2Q6F5E8 1435 aa19.5■□□□□ 0.71
TMEM258-205ENST00000540434 UACAQ9BZF9 1416 aa19.5■□□□□ 0.71
TMEM258-205ENST00000540434 KIF21BO75037 1637 aa19.49■□□□□ 0.71
TMEM258-205ENST00000540434 KIF27Q86VH2 1401 aa19.49■□□□□ 0.71
TMEM258-205ENST00000540434 KDM5BQ9UGL1 1544 aa19.46■□□□□ 0.71
TMEM258-205ENST00000540434 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
TMEM258-205ENST00000540434 ZCCHC11Q5TAX3 1644 aaKnown RBP19.44■□□□□ 0.7
TMEM258-205ENST00000540434 DISP1Q96F81 1524 aa19.43■□□□□ 0.7
TMEM258-205ENST00000540434 SOCS7O14512 581 aa19.43■□□□□ 0.7
TMEM258-205ENST00000540434 IQGAP2Q13576 1575 aa19.43■□□□□ 0.7
TMEM258-205ENST00000540434 PTPRMP28827 1452 aa19.41■□□□□ 0.7
TMEM258-205ENST00000540434 DISP3Q9P2K9 1392 aa19.39■□□□□ 0.69
TMEM258-205ENST00000540434 KCNH8Q96L42 1107 aa19.36■□□□□ 0.69
TMEM258-205ENST00000540434 WDR7Q9Y4E6 1490 aa19.35■□□□□ 0.69
TMEM258-205ENST00000540434 CD109Q6YHK3 1445 aa19.35■□□□□ 0.69
TMEM258-205ENST00000540434 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
TMEM258-205ENST00000540434 ADAMTSL3P82987 1691 aa19.33■□□□□ 0.68
TMEM258-205ENST00000540434 PCF11O94913 1555 aaKnown RBP19.32■□□□□ 0.68
TMEM258-205ENST00000540434 MAGI3Q5TCQ9 1506 aa19.32■□□□□ 0.68
TMEM258-205ENST00000540434 UGGT2Q9NYU1 1516 aa19.32■□□□□ 0.68
TMEM258-205ENST00000540434 HSPA2P54652 639 aa19.31■□□□□ 0.68
TMEM258-205ENST00000540434 CERKQ8TCT0 537 aa19.3■□□□□ 0.68
TMEM258-205ENST00000540434 KIAA0556O60303 1618 aa19.28■□□□□ 0.68
TMEM258-205ENST00000540434 CFAP43Q8NDM7 1665 aa19.27■□□□□ 0.68
TMEM258-205ENST00000540434 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
TMEM258-205ENST00000540434 MADDQ8WXG6 1647 aa19.25■□□□□ 0.67
TMEM258-205ENST00000540434 RAPGEF3O95398 923 aa19.2■□□□□ 0.66
TMEM258-205ENST00000540434 ARID4BQ4LE39 1312 aaPredicted RBP19.2■□□□□ 0.66
TMEM258-205ENST00000540434 BCORL1Q5H9F3 1711 aa19.2■□□□□ 0.66
TMEM258-205ENST00000540434 RAPGEF2Q9Y4G8 1499 aa19.19■□□□□ 0.66
TMEM258-205ENST00000540434 ARAP3Q8WWN8 1544 aa19.19■□□□□ 0.66
TMEM258-205ENST00000540434 FAM9AQ8IZU1 332 aaPredicted RBP19.17■□□□□ 0.66
TMEM258-205ENST00000540434 ABCA8O94911 1581 aa19.17■□□□□ 0.66
TMEM258-205ENST00000540434 PRXQ9BXM0 1461 aa19.16■□□□□ 0.66
TMEM258-205ENST00000540434 RIMS1Q86UR5 1692 aaKnown RBP19.15■□□□□ 0.66
TMEM258-205ENST00000540434 ARID3CA6NKF2 412 aa19.15■□□□□ 0.66
TMEM258-205ENST00000540434 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
TMEM258-205ENST00000540434 SPATA31D1Q6ZQQ2 1576 aa19.11■□□□□ 0.65
TMEM258-205ENST00000540434 CTTNBP2Q8WZ74 1663 aa19.1■□□□□ 0.65
TMEM258-205ENST00000540434 FRMPD1Q5SYB0 1578 aa19.06■□□□□ 0.64
TMEM258-205ENST00000540434 GOLGA3Q08378 1498 aa19.05■□□□□ 0.64
TMEM258-205ENST00000540434 PHLDB1Q86UU1 1377 aa19.04■□□□□ 0.64
TMEM258-205ENST00000540434 ABCA9Q8IUA7 1624 aa19.03■□□□□ 0.64
TMEM258-205ENST00000540434 EEA1Q15075 1411 aa19.02■□□□□ 0.64
TMEM258-205ENST00000540434 ATP10BO94823 1461 aa19.01■□□□□ 0.63
TMEM258-205ENST00000540434 MLECQ14165 292 aa18.99■□□□□ 0.63
TMEM258-205ENST00000540434 EHMT2Q96KQ7 1210 aa18.98■□□□□ 0.63
TMEM258-205ENST00000540434 SIGLEC1Q9BZZ2 1709 aa18.97■□□□□ 0.63
TMEM258-205ENST00000540434 NEO1Q92859 1461 aa18.96■□□□□ 0.63
TMEM258-205ENST00000540434 ARHGEF40Q8TER5 1519 aa18.95■□□□□ 0.62
TMEM258-205ENST00000540434 P3H3Q8IVL6 736 aa18.92■□□□□ 0.62
TMEM258-205ENST00000540434 CEBPAP49715 358 aaPredicted RBP18.9■□□□□ 0.62
TMEM258-205ENST00000540434 STRCQ7RTU9 1775 aa18.89■□□□□ 0.61
TMEM258-205ENST00000540434 YEATS2Q9ULM3 1422 aa18.88■□□□□ 0.61
TMEM258-205ENST00000540434 RICTORQ6R327 1708 aa18.88■□□□□ 0.61
TMEM258-205ENST00000540434 FANCAO15360 1455 aa18.86■□□□□ 0.61
TMEM258-205ENST00000540434 DENND4BO75064 1496 aaPredicted RBP18.86■□□□□ 0.61
TMEM258-205ENST00000540434 FER1L4A9Z1Z3 1794 aa18.86■□□□□ 0.61
TMEM258-205ENST00000540434 POGZQ7Z3K3 1410 aa18.85■□□□□ 0.61
TMEM258-205ENST00000540434 RANGAP1P46060 587 aaPredicted RBP18.85■□□□□ 0.61
TMEM258-205ENST00000540434 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.84■□□□□ 0.61
TMEM258-205ENST00000540434 HNRNPUL2Q1KMD3 747 aaKnown RBP18.84■□□□□ 0.61
TMEM258-205ENST00000540434 AKNAQ7Z591 1439 aa18.83■□□□□ 0.61
TMEM258-205ENST00000540434 TTC37Q6PGP7 1564 aa18.83■□□□□ 0.6
TMEM258-205ENST00000540434 PREX1Q8TCU6 1659 aa18.82■□□□□ 0.6
TMEM258-205ENST00000540434 RAPGEF6Q8TEU7 1601 aa18.82■□□□□ 0.6
TMEM258-205ENST00000540434 DMRT2Q9Y5R5 561 aa18.81■□□□□ 0.6
TMEM258-205ENST00000540434 FHOD3Q2V2M9 1422 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms