RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 GRIN2AQ12879 1464 aa19.51■□□□□ 0.71
CYB561A3-214ENST00000540139 RAPGEF2Q9Y4G8 1499 aa19.5■□□□□ 0.71
CYB561A3-214ENST00000540139 FAM9AQ8IZU1 332 aaPredicted RBP19.48■□□□□ 0.71
CYB561A3-214ENST00000540139 NUP160Q12769 1436 aa19.45■□□□□ 0.7
CYB561A3-214ENST00000540139 CHD1O14646 1710 aa19.44■□□□□ 0.7
CYB561A3-214ENST00000540139 KIF21BO75037 1637 aa19.39■□□□□ 0.69
CYB561A3-214ENST00000540139 KIAA0586Q9BVV6 1533 aa19.36■□□□□ 0.69
CYB561A3-214ENST00000540139 CEP170Q5SW79 1584 aa19.34■□□□□ 0.69
CYB561A3-214ENST00000540139 CLASP1Q7Z460 1538 aa19.33■□□□□ 0.68
CYB561A3-214ENST00000540139 GOLGA3Q08378 1498 aa19.32■□□□□ 0.68
CYB561A3-214ENST00000540139 DNAJC5Q9H3Z4 198 aa19.3■□□□□ 0.68
CYB561A3-214ENST00000540139 JPH4Q96JJ6 628 aa19.29■□□□□ 0.68
CYB561A3-214ENST00000540139 UBTFP17480 764 aaKnown RBP19.24■□□□□ 0.67
CYB561A3-214ENST00000540139 IQGAP2Q13576 1575 aa19.22■□□□□ 0.67
CYB561A3-214ENST00000540139 SHROOM2Q13796 1616 aa19.21■□□□□ 0.67
CYB561A3-214ENST00000540139 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
CYB561A3-214ENST00000540139 FOXD1Q16676 465 aa19.19■□□□□ 0.66
CYB561A3-214ENST00000540139 PPP4R3CPQ6ZMV5 832 aa19.18■□□□□ 0.66
CYB561A3-214ENST00000540139 UGGT2Q9NYU1 1516 aa19.18■□□□□ 0.66
CYB561A3-214ENST00000540139 CTTNBP2Q8WZ74 1663 aa19.17■□□□□ 0.66
CYB561A3-214ENST00000540139 PRG4Q92954 1404 aaPredicted RBP19.16■□□□□ 0.66
CYB561A3-214ENST00000540139 CARMIL2Q6F5E8 1435 aa19.14■□□□□ 0.65
CYB561A3-214ENST00000540139 ARHGEF11O15085 1522 aa19.11■□□□□ 0.65
CYB561A3-214ENST00000540139 LOC105371045A0A1W2PR82 267 aa19.11■□□□□ 0.65
CYB561A3-214ENST00000540139 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.64
CYB561A3-214ENST00000540139 DISP1Q96F81 1524 aa19.08■□□□□ 0.64
CYB561A3-214ENST00000540139 EFCAB5A4FU69 1503 aa19.04■□□□□ 0.64
CYB561A3-214ENST00000540139 RIMBP3CA6NJZ7 1639 aa19.03■□□□□ 0.64
CYB561A3-214ENST00000540139 RIMBP3BA6NNM3 1639 aa19.03■□□□□ 0.64
CYB561A3-214ENST00000540139 RIMBP3Q9UFD9 1639 aa19.03■□□□□ 0.64
CYB561A3-214ENST00000540139 ERCC6L2Q5T890 1561 aa19.02■□□□□ 0.64
CYB561A3-214ENST00000540139 SAMD9Q5K651 1589 aa19.02■□□□□ 0.63
CYB561A3-214ENST00000540139 PTPRGP23470 1445 aa19.01■□□□□ 0.63
CYB561A3-214ENST00000540139 KIAA0556O60303 1618 aa19.01■□□□□ 0.63
CYB561A3-214ENST00000540139 ARAP1Q96P48 1450 aa18.98■□□□□ 0.63
CYB561A3-214ENST00000540139 CLIP1P30622 1438 aa18.98■□□□□ 0.63
CYB561A3-214ENST00000540139 ARHGAP35Q9NRY4 1499 aa18.97■□□□□ 0.63
CYB561A3-214ENST00000540139 RANGAP1P46060 587 aaPredicted RBP18.96■□□□□ 0.63
CYB561A3-214ENST00000540139 CEP162Q5TB80 1403 aa18.95■□□□□ 0.62
CYB561A3-214ENST00000540139 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
CYB561A3-214ENST00000540139 P3H3Q8IVL6 736 aa18.94■□□□□ 0.62
CYB561A3-214ENST00000540139 RTN4Q9NQC3 1192 aaKnown RBP18.94■□□□□ 0.62
CYB561A3-214ENST00000540139 AMER1Q5JTC6 1135 aaPredicted RBP18.93■□□□□ 0.62
CYB561A3-214ENST00000540139 FHOD3Q2V2M9 1422 aa18.91■□□□□ 0.62
CYB561A3-214ENST00000540139 FMN1Q68DA7 1419 aa18.9■□□□□ 0.62
CYB561A3-214ENST00000540139 UACAQ9BZF9 1416 aa18.89■□□□□ 0.61
CYB561A3-214ENST00000540139 UHRF1BP1LA0JNW5 1464 aa18.88■□□□□ 0.61
CYB561A3-214ENST00000540139 ZBTB22O15209 634 aa18.85■□□□□ 0.61
CYB561A3-214ENST00000540139 NPM3O75607 178 aaKnown RBP18.84■□□□□ 0.61
CYB561A3-214ENST00000540139 ABCA8O94911 1581 aa18.83■□□□□ 0.6
CYB561A3-214ENST00000540139 TTBK1Q5TCY1 1321 aaPredicted RBP18.82■□□□□ 0.6
CYB561A3-214ENST00000540139 ABCC2Q92887 1545 aa18.81■□□□□ 0.6
CYB561A3-214ENST00000540139 PLB1Q6P1J6 1458 aa18.81■□□□□ 0.6
CYB561A3-214ENST00000540139 NPM1P06748 294 aaKnown RBP eCLIP18.79■□□□□ 0.6
CYB561A3-214ENST00000540139 CASKIN1Q8WXD9 1431 aa18.77■□□□□ 0.6
CYB561A3-214ENST00000540139 KDM5BQ9UGL1 1544 aa18.76■□□□□ 0.59
CYB561A3-214ENST00000540139 ADCY10Q96PN6 1610 aa18.76■□□□□ 0.59
CYB561A3-214ENST00000540139 RAPGEF6Q8TEU7 1601 aa18.75■□□□□ 0.59
CYB561A3-214ENST00000540139 VPS8Q8N3P4 1428 aa18.74■□□□□ 0.59
CYB561A3-214ENST00000540139 NUP153P49790 1475 aaKnown RBP18.72■□□□□ 0.59
CYB561A3-214ENST00000540139 FYCO1Q9BQS8 1478 aa18.71■□□□□ 0.59
CYB561A3-214ENST00000540139 ATP10BO94823 1461 aa18.7■□□□□ 0.58
CYB561A3-214ENST00000540139 HECW1Q76N89 1606 aa18.67■□□□□ 0.58
CYB561A3-214ENST00000540139 MAPKBP1O60336 1514 aa18.66■□□□□ 0.58
CYB561A3-214ENST00000540139 CCDC18Q5T9S5 1454 aa18.65■□□□□ 0.58
CYB561A3-214ENST00000540139 EPRSP07814 1512 aaKnown RBP18.65■□□□□ 0.58
CYB561A3-214ENST00000540139 ATP1B4Q9UN42 357 aaPredicted RBP18.65■□□□□ 0.58
CYB561A3-214ENST00000540139 CDK11AQ9UQ88 783 aaPredicted RBP18.65■□□□□ 0.58
CYB561A3-214ENST00000540139 PCF11O94913 1555 aaKnown RBP18.64■□□□□ 0.57
CYB561A3-214ENST00000540139 PLEKHD1A6NEE1 506 aa18.62■□□□□ 0.57
CYB561A3-214ENST00000540139 ZCCHC11Q5TAX3 1644 aaKnown RBP18.61■□□□□ 0.57
CYB561A3-214ENST00000540139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.61■□□□□ 0.57
CYB561A3-214ENST00000540139 HNRNPUL2Q1KMD3 747 aaKnown RBP18.61■□□□□ 0.57
CYB561A3-214ENST00000540139 ASXL2Q76L83 1435 aa18.6■□□□□ 0.57
CYB561A3-214ENST00000540139 MAP3K1Q13233 1512 aa18.59■□□□□ 0.57
CYB561A3-214ENST00000540139 ARID3CA6NKF2 412 aa18.58■□□□□ 0.56
CYB561A3-214ENST00000540139 WDR7Q9Y4E6 1490 aa18.57■□□□□ 0.56
CYB561A3-214ENST00000540139 APLP2Q06481 763 aa18.56■□□□□ 0.56
CYB561A3-214ENST00000540139 CDK13Q14004 1512 aaKnown RBP18.55■□□□□ 0.56
CYB561A3-214ENST00000540139 ABCC10Q5T3U5 1492 aa18.53■□□□□ 0.56
CYB561A3-214ENST00000540139 TROQ12816 1431 aaPredicted RBP18.53■□□□□ 0.56
CYB561A3-214ENST00000540139 LRRIQ1Q96JM4 1722 aa18.5■□□□□ 0.55
CYB561A3-214ENST00000540139 GLI2P10070 1586 aa18.49■□□□□ 0.55
CYB561A3-214ENST00000540139 TIAM1Q13009 1591 aa18.48■□□□□ 0.55
CYB561A3-214ENST00000540139 FAM69CQ0P6D2 419 aa18.48■□□□□ 0.55
CYB561A3-214ENST00000540139 KCNH8Q96L42 1107 aa18.48■□□□□ 0.55
CYB561A3-214ENST00000540139 MTUS2Q5JR59 1369 aa18.47■□□□□ 0.55
CYB561A3-214ENST00000540139 LRRC9Q6ZRR7 1453 aa18.45■□□□□ 0.54
CYB561A3-214ENST00000540139 CFAP43Q8NDM7 1665 aa18.44■□□□□ 0.54
CYB561A3-214ENST00000540139 DIP2BQ9P265 1576 aa18.43■□□□□ 0.54
CYB561A3-214ENST00000540139 MAGI3Q5TCQ9 1506 aa18.43■□□□□ 0.54
CYB561A3-214ENST00000540139 EHBP1L1Q8N3D4 1523 aa18.43■□□□□ 0.54
CYB561A3-214ENST00000540139 TRHP20396 242 aaPredicted RBP18.42■□□□□ 0.54
CYB561A3-214ENST00000540139 KANK4Q5T7N3 995 aaPredicted RBP18.41■□□□□ 0.54
CYB561A3-214ENST00000540139 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
CYB561A3-214ENST00000540139 ABCA9Q8IUA7 1624 aa18.39■□□□□ 0.53
CYB561A3-214ENST00000540139 CD109Q6YHK3 1445 aa18.39■□□□□ 0.53
CYB561A3-214ENST00000540139 KIF14Q15058 1648 aa18.38■□□□□ 0.53
CYB561A3-214ENST00000540139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.37■□□□□ 0.53
CYB561A3-214ENST00000540139 KIF13AQ9H1H9 1805 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms