RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
CYB561A3-214ENST00000540139 CHIC1Q5VXU3 224 aa25.75■■□□□ 1.71
CYB561A3-214ENST00000540139 AEBP2Q6ZN18 517 aaPredicted RBP24.89■■□□□ 1.58
CYB561A3-214ENST00000540139 CCDC180Q9P1Z9 1646 aa24.73■■□□□ 1.55
CYB561A3-214ENST00000540139 ABCC9O60706 1549 aa23.83■■□□□ 1.41
CYB561A3-214ENST00000540139 ZCCHC6Q5VYS8 1495 aaKnown RBP23.41■■□□□ 1.34
CYB561A3-214ENST00000540139 MYO15BQ96JP2 1530 aa23.3■■□□□ 1.32
CYB561A3-214ENST00000540139 DCAF1Q9Y4B6 1507 aa23.28■■□□□ 1.32
CYB561A3-214ENST00000540139 NACADO15069 1562 aa23.24■■□□□ 1.31
CYB561A3-214ENST00000540139 DCAF8L2P0C7V8 631 aa23.23■■□□□ 1.31
CYB561A3-214ENST00000540139 RB1CC1Q8TDY2 1594 aa23.14■■□□□ 1.29
CYB561A3-214ENST00000540139 PHF23Q9BUL5 403 aaPredicted RBP22.83■■□□□ 1.25
CYB561A3-214ENST00000540139 SCRIBQ14160 1630 aa22.49■■□□□ 1.19
CYB561A3-214ENST00000540139 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
CYB561A3-214ENST00000540139 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
CYB561A3-214ENST00000540139 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
CYB561A3-214ENST00000540139 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.16
CYB561A3-214ENST00000540139 EIF4G1Q04637 1599 aaKnown RBP21.78■■□□□ 1.08
CYB561A3-214ENST00000540139 CECR2Q9BXF3 1484 aa21.75■■□□□ 1.07
CYB561A3-214ENST00000540139 BAZ1AQ9NRL2 1556 aaPredicted RBP21.7■■□□□ 1.06
CYB561A3-214ENST00000540139 SMARCA4P51532 1647 aa21.62■■□□□ 1.05
CYB561A3-214ENST00000540139 DNAJC5BQ9UF47 199 aa21.62■■□□□ 1.05
CYB561A3-214ENST00000540139 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.05
CYB561A3-214ENST00000540139 MROH2BQ7Z745 1585 aa21.56■■□□□ 1.04
CYB561A3-214ENST00000540139 PLPPR3Q6T4P5 718 aa21.54■■□□□ 1.04
CYB561A3-214ENST00000540139 RSF1Q96T23 1441 aaPredicted RBP21.49■■□□□ 1.03
CYB561A3-214ENST00000540139 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
CYB561A3-214ENST00000540139 PEG3Q9GZU2 1588 aa21.48■■□□□ 1.03
CYB561A3-214ENST00000540139 NCAPD3P42695 1498 aa21.48■■□□□ 1.03
CYB561A3-214ENST00000540139 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
CYB561A3-214ENST00000540139 HMGXB3Q12766 1538 aa21.34■■□□□ 1.01
CYB561A3-214ENST00000540139 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
CYB561A3-214ENST00000540139 WIZO95785 1651 aa21.28■■□□□ 1
CYB561A3-214ENST00000540139 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
CYB561A3-214ENST00000540139 SUPT5HO00267 1087 aaKnown RBP21.13■□□□□ 0.97
CYB561A3-214ENST00000540139 CCDC88BA6NC98 1476 aa20.92■□□□□ 0.94
CYB561A3-214ENST00000540139 CADPSQ9ULU8 1353 aa20.86■□□□□ 0.93
CYB561A3-214ENST00000540139 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
CYB561A3-214ENST00000540139 EHMT2Q96KQ7 1210 aa20.81■□□□□ 0.92
CYB561A3-214ENST00000540139 CFTRP13569 1480 aa20.79■□□□□ 0.92
CYB561A3-214ENST00000540139 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
CYB561A3-214ENST00000540139 NESP48681 1621 aa20.71■□□□□ 0.91
CYB561A3-214ENST00000540139 PDS5BQ9NTI5 1447 aa20.7■□□□□ 0.9
CYB561A3-214ENST00000540139 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
CYB561A3-214ENST00000540139 ERCC6Q03468 1493 aa20.54■□□□□ 0.88
CYB561A3-214ENST00000540139 PRDM2Q13029 1718 aa20.53■□□□□ 0.88
CYB561A3-214ENST00000540139 CEP164Q9UPV0 1460 aa20.49■□□□□ 0.87
CYB561A3-214ENST00000540139 KIF21AQ7Z4S6 1674 aa20.42■□□□□ 0.86
CYB561A3-214ENST00000540139 KCNA4P22459 653 aa20.41■□□□□ 0.86
CYB561A3-214ENST00000540139 MRC2Q9UBG0 1479 aa20.4■□□□□ 0.86
CYB561A3-214ENST00000540139 ABCC8Q09428 1581 aa20.38■□□□□ 0.85
CYB561A3-214ENST00000540139 THOC2Q8NI27 1593 aaKnown RBP20.33■□□□□ 0.84
CYB561A3-214ENST00000540139 WDR62O43379 1518 aa20.32■□□□□ 0.84
CYB561A3-214ENST00000540139 URB2Q14146 1524 aaKnown RBP20.3■□□□□ 0.84
CYB561A3-214ENST00000540139 CUX2O14529 1486 aa20.28■□□□□ 0.84
CYB561A3-214ENST00000540139 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
CYB561A3-214ENST00000540139 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
CYB561A3-214ENST00000540139 WRNQ14191 1432 aaPredicted RBP eCLIP20.25■□□□□ 0.83
CYB561A3-214ENST00000540139 CUX1P39880 1505 aa20.2■□□□□ 0.82
CYB561A3-214ENST00000540139 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
CYB561A3-214ENST00000540139 ADRA2BP18089 450 aa20.14■□□□□ 0.81
CYB561A3-214ENST00000540139 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
CYB561A3-214ENST00000540139 BIVM-ERCC5R4GMW8 1640 aa20.1■□□□□ 0.81
CYB561A3-214ENST00000540139 FGD5Q6ZNL6 1462 aa20.09■□□□□ 0.81
CYB561A3-214ENST00000540139 IFT140Q96RY7 1462 aa20.09■□□□□ 0.81
CYB561A3-214ENST00000540139 SYNJ1O43426 1573 aa20.08■□□□□ 0.81
CYB561A3-214ENST00000540139 SOGA1O94964 1423 aa20.07■□□□□ 0.8
CYB561A3-214ENST00000540139 TRIM41Q8WV44 630 aa20.02■□□□□ 0.8
CYB561A3-214ENST00000540139 TARBP1Q13395 1621 aaKnown RBP19.98■□□□□ 0.79
CYB561A3-214ENST00000540139 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
CYB561A3-214ENST00000540139 ABCA10Q8WWZ4 1543 aa19.97■□□□□ 0.79
CYB561A3-214ENST00000540139 CSRNP3Q8WYN3 585 aa19.95■□□□□ 0.78
CYB561A3-214ENST00000540139 WDR97A6NE52 1622 aa19.94■□□□□ 0.78
CYB561A3-214ENST00000540139 ZNF608Q9ULD9 1512 aaPredicted RBP19.89■□□□□ 0.77
CYB561A3-214ENST00000540139 TDRD9Q8NDG6 1382 aaKnown RBP19.87■□□□□ 0.77
CYB561A3-214ENST00000540139 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.77
CYB561A3-214ENST00000540139 GAPVD1Q14C86 1478 aa19.83■□□□□ 0.76
CYB561A3-214ENST00000540139 KIF27Q86VH2 1401 aa19.83■□□□□ 0.76
CYB561A3-214ENST00000540139 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
CYB561A3-214ENST00000540139 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
CYB561A3-214ENST00000540139 EIF4G3O43432 1585 aaKnown RBP19.78■□□□□ 0.76
CYB561A3-214ENST00000540139 ERICH3Q5RHP9 1530 aa19.74■□□□□ 0.75
CYB561A3-214ENST00000540139 IGF1RP08069 1367 aa19.72■□□□□ 0.75
CYB561A3-214ENST00000540139 EEA1Q15075 1411 aa19.72■□□□□ 0.75
CYB561A3-214ENST00000540139 MAGI1Q96QZ7 1491 aaPredicted RBP19.72■□□□□ 0.75
CYB561A3-214ENST00000540139 SLC4A1APQ9BWU0 796 aaKnown RBP19.69■□□□□ 0.74
CYB561A3-214ENST00000540139 SNAPC4Q5SXM2 1469 aa19.66■□□□□ 0.74
CYB561A3-214ENST00000540139 PPP6R1Q9UPN7 881 aa19.64■□□□□ 0.73
CYB561A3-214ENST00000540139 FHAD1B1AJZ9 1412 aa19.64■□□□□ 0.73
CYB561A3-214ENST00000540139 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.73
CYB561A3-214ENST00000540139 PBRM1Q86U86 1689 aa19.64■□□□□ 0.73
CYB561A3-214ENST00000540139 SYNJ2O15056 1496 aa19.61■□□□□ 0.73
CYB561A3-214ENST00000540139 CARMIL1Q5VZK9 1371 aa19.6■□□□□ 0.73
CYB561A3-214ENST00000540139 CHMP7Q8WUX9 453 aaPredicted RBP19.6■□□□□ 0.73
CYB561A3-214ENST00000540139 CUL7Q14999 1698 aa19.57■□□□□ 0.72
CYB561A3-214ENST00000540139 ADAMTS12P58397 1594 aa19.57■□□□□ 0.72
CYB561A3-214ENST00000540139 OSCARQ8IYS5 282 aa19.54■□□□□ 0.72
CYB561A3-214ENST00000540139 FBLN2P98095 1184 aa19.53■□□□□ 0.72
CYB561A3-214ENST00000540139 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
CYB561A3-214ENST00000540139 SLC24A1O60721 1099 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms