RNA–Protein interactions for RNA: ENST00000539893.5

VTCN1-207, Transcript of V-set domain containing T cell activation inhibitor 1, humanhuman

TSL 2 BASIC

Gene VTCN1, Length 2,719 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTCN1-207ENST00000539893 AMER1Q5JTC6 1135 aaPredicted RBP10.49□□□□□ -0.73
VTCN1-207ENST00000539893 MAP3K1Q13233 1512 aa10.48□□□□□ -0.73
VTCN1-207ENST00000539893 APLP2Q06481 763 aa10.47□□□□□ -0.73
VTCN1-207ENST00000539893 CFAP43Q8NDM7 1665 aa10.46□□□□□ -0.73
VTCN1-207ENST00000539893 RANGAP1P46060 587 aaPredicted RBP10.46□□□□□ -0.74
VTCN1-207ENST00000539893 TIAM1Q13009 1591 aa10.45□□□□□ -0.74
VTCN1-207ENST00000539893 RRBP1Q9P2E9 1410 aaKnown RBP10.45□□□□□ -0.74
VTCN1-207ENST00000539893 PDS5BQ9NTI5 1447 aa10.44□□□□□ -0.74
VTCN1-207ENST00000539893 PRKCSHP14314 528 aaPredicted RBP10.43□□□□□ -0.74
VTCN1-207ENST00000539893 EFCAB5A4FU69 1503 aa10.43□□□□□ -0.74
VTCN1-207ENST00000539893 TARBP1Q13395 1621 aaKnown RBP10.43□□□□□ -0.74
VTCN1-207ENST00000539893 KANK4Q5T7N3 995 aaPredicted RBP10.42□□□□□ -0.74
VTCN1-207ENST00000539893 PCF11O94913 1555 aaKnown RBP10.41□□□□□ -0.74
VTCN1-207ENST00000539893 PBRM1Q86U86 1689 aa10.39□□□□□ -0.75
VTCN1-207ENST00000539893 HNRNPUL2Q1KMD3 747 aaKnown RBP10.39□□□□□ -0.75
VTCN1-207ENST00000539893 FHAD1B1AJZ9 1412 aa10.39□□□□□ -0.75
VTCN1-207ENST00000539893 DNAJC5BQ9UF47 199 aa10.38□□□□□ -0.75
VTCN1-207ENST00000539893 SAMD9Q5K651 1589 aa10.38□□□□□ -0.75
VTCN1-207ENST00000539893 AQRO60306 1485 aaKnown RBP eCLIP10.38□□□□□ -0.75
VTCN1-207ENST00000539893 GAPVD1Q14C86 1478 aa10.37□□□□□ -0.75
VTCN1-207ENST00000539893 LRRC9Q6ZRR7 1453 aa10.37□□□□□ -0.75
VTCN1-207ENST00000539893 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
VTCN1-207ENST00000539893 LRRIQ1Q96JM4 1722 aa10.35□□□□□ -0.75
VTCN1-207ENST00000539893 CCNB3Q8WWL7 1395 aa10.34□□□□□ -0.75
VTCN1-207ENST00000539893 CASKIN1Q8WXD9 1431 aa10.33□□□□□ -0.76
VTCN1-207ENST00000539893 FHOD3Q2V2M9 1422 aa10.33□□□□□ -0.76
VTCN1-207ENST00000539893 MRC2Q9UBG0 1479 aa10.33□□□□□ -0.76
VTCN1-207ENST00000539893 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
VTCN1-207ENST00000539893 CLSPNQ9HAW4 1339 aa10.32□□□□□ -0.76
VTCN1-207ENST00000539893 TDRD9Q8NDG6 1382 aaKnown RBP10.32□□□□□ -0.76
VTCN1-207ENST00000539893 ADAMTS12P58397 1594 aa10.31□□□□□ -0.76
VTCN1-207ENST00000539893 DHX57Q6P158 1386 aaKnown RBP10.31□□□□□ -0.76
VTCN1-207ENST00000539893 THOC2Q8NI27 1593 aaKnown RBP10.3□□□□□ -0.76
VTCN1-207ENST00000539893 WDR62O43379 1518 aa10.3□□□□□ -0.76
VTCN1-207ENST00000539893 FMN1Q68DA7 1419 aa10.29□□□□□ -0.76
VTCN1-207ENST00000539893 PHLDB1Q86UU1 1377 aa10.28□□□□□ -0.76
VTCN1-207ENST00000539893 NPM3O75607 178 aaKnown RBP10.27□□□□□ -0.77
VTCN1-207ENST00000539893 GRIN2BQ13224 1484 aa10.27□□□□□ -0.77
VTCN1-207ENST00000539893 ZNF316A6NFI3 1004 aaPredicted RBP10.25□□□□□ -0.77
VTCN1-207ENST00000539893 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.25□□□□□ -0.77
VTCN1-207ENST00000539893 IQGAP2Q13576 1575 aa10.25□□□□□ -0.77
VTCN1-207ENST00000539893 DIEXFQ68CQ4 756 aaKnown RBP10.24□□□□□ -0.77
VTCN1-207ENST00000539893 P3H3Q8IVL6 736 aa10.24□□□□□ -0.77
VTCN1-207ENST00000539893 IFT140Q96RY7 1462 aa10.24□□□□□ -0.77
VTCN1-207ENST00000539893 SUPT6HQ7KZ85 1726 aaKnown RBP10.22□□□□□ -0.77
VTCN1-207ENST00000539893 MAPKBP1O60336 1514 aa10.22□□□□□ -0.77
VTCN1-207ENST00000539893 EHBP1L1Q8N3D4 1523 aa10.21□□□□□ -0.77
VTCN1-207ENST00000539893 RAB3GAP2Q9H2M9 1393 aa10.21□□□□□ -0.78
VTCN1-207ENST00000539893 UGGT2Q9NYU1 1516 aa10.21□□□□□ -0.78
VTCN1-207ENST00000539893 EIF4G3O43432 1585 aaKnown RBP10.2□□□□□ -0.78
VTCN1-207ENST00000539893 SETD5Q9C0A6 1442 aa10.2□□□□□ -0.78
VTCN1-207ENST00000539893 ARHGEF11O15085 1522 aa10.2□□□□□ -0.78
VTCN1-207ENST00000539893 HECW1Q76N89 1606 aa10.2□□□□□ -0.78
VTCN1-207ENST00000539893 PPP4R3CPQ6ZMV5 832 aa10.2□□□□□ -0.78
VTCN1-207ENST00000539893 ZNF608Q9ULD9 1512 aaPredicted RBP10.19□□□□□ -0.78
VTCN1-207ENST00000539893 CCDC18Q5T9S5 1454 aa10.19□□□□□ -0.78
VTCN1-207ENST00000539893 FGD6Q6ZV73 1430 aa10.19□□□□□ -0.78
VTCN1-207ENST00000539893 MAGI3Q5TCQ9 1506 aa10.18□□□□□ -0.78
VTCN1-207ENST00000539893 NCOA2Q15596 1464 aa10.16□□□□□ -0.78
VTCN1-207ENST00000539893 NCBP3Q53F19 620 aaKnown RBP10.16□□□□□ -0.78
VTCN1-207ENST00000539893 KIAA0556O60303 1618 aa10.15□□□□□ -0.78
VTCN1-207ENST00000539893 PTPN23Q9H3S7 1636 aa10.15□□□□□ -0.79
VTCN1-207ENST00000539893 MTUS2Q5JR59 1369 aa10.14□□□□□ -0.79
VTCN1-207ENST00000539893 MYOM3Q5VTT5 1437 aa10.14□□□□□ -0.79
VTCN1-207ENST00000539893 KIAA0586Q9BVV6 1533 aa10.14□□□□□ -0.79
VTCN1-207ENST00000539893 ITGAEP38570 1179 aa10.13□□□□□ -0.79
VTCN1-207ENST00000539893 ATP1B4Q9UN42 357 aaPredicted RBP10.13□□□□□ -0.79
VTCN1-207ENST00000539893 EPRSP07814 1512 aaKnown RBP10.13□□□□□ -0.79
VTCN1-207ENST00000539893 GRIN2AQ12879 1464 aa10.13□□□□□ -0.79
VTCN1-207ENST00000539893 DISP1Q96F81 1524 aa10.13□□□□□ -0.79
VTCN1-207ENST00000539893 TCOF1Q13428 1488 aaKnown RBP10.12□□□□□ -0.79
VTCN1-207ENST00000539893 MAGI1Q96QZ7 1491 aaPredicted RBP10.12□□□□□ -0.79
VTCN1-207ENST00000539893 FAM50AQ14320 339 aaKnown RBP10.12□□□□□ -0.79
VTCN1-207ENST00000539893 GCC2Q8IWJ2 1684 aa10.12□□□□□ -0.79
VTCN1-207ENST00000539893 PTPRKQ15262 1439 aa10.11□□□□□ -0.79
VTCN1-207ENST00000539893 ERCC6Q03468 1493 aa10.1□□□□□ -0.79
VTCN1-207ENST00000539893 HFM1A2PYH4 1435 aa10.1□□□□□ -0.79
VTCN1-207ENST00000539893 CEP170Q5SW79 1584 aa10.1□□□□□ -0.79
VTCN1-207ENST00000539893 RAPGEF6Q8TEU7 1601 aa10.1□□□□□ -0.79
VTCN1-207ENST00000539893 CDK13Q14004 1512 aaKnown RBP10.1□□□□□ -0.79
VTCN1-207ENST00000539893 SCAF1Q9H7N4 1312 aaKnown RBP10.08□□□□□ -0.8
VTCN1-207ENST00000539893 SYNJ2O15056 1496 aa10.08□□□□□ -0.8
VTCN1-207ENST00000539893 ACIN1Q9UKV3 1341 aaKnown RBP10.07□□□□□ -0.8
VTCN1-207ENST00000539893 NAIPQ13075 1403 aa10.06□□□□□ -0.8
VTCN1-207ENST00000539893 MIA2Q96PC5 1412 aa10.06□□□□□ -0.8
VTCN1-207ENST00000539893 AKNAQ7Z591 1439 aa10.06□□□□□ -0.8
VTCN1-207ENST00000539893 NUP153P49790 1475 aaKnown RBP10.05□□□□□ -0.8
VTCN1-207ENST00000539893 NUP160Q12769 1436 aa10.05□□□□□ -0.8
VTCN1-207ENST00000539893 UACAQ9BZF9 1416 aa10.05□□□□□ -0.8
VTCN1-207ENST00000539893 ADCY10Q96PN6 1610 aa10.05□□□□□ -0.8
VTCN1-207ENST00000539893 MIER1Q8N108 512 aa10.05□□□□□ -0.8
VTCN1-207ENST00000539893 NEUROD1Q13562 356 aa10.04□□□□□ -0.8
VTCN1-207ENST00000539893 TIMELESSQ9UNS1 1208 aa10.03□□□□□ -0.8
VTCN1-207ENST00000539893 FOXD1Q16676 465 aa10.03□□□□□ -0.8
VTCN1-207ENST00000539893 DNMT1P26358 1616 aaKnown RBP10.03□□□□□ -0.8
VTCN1-207ENST00000539893 CENPBP07199 599 aaPredicted RBP10.02□□□□□ -0.81
VTCN1-207ENST00000539893 ITSN2Q9NZM3 1697 aa10.02□□□□□ -0.81
VTCN1-207ENST00000539893 KDM6BO15054 1643 aa10.01□□□□□ -0.81
VTCN1-207ENST00000539893 FKBP8Q14318 412 aa10.01□□□□□ -0.81
VTCN1-207ENST00000539893 SIN3AQ96ST3 1273 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 588.8 ms