RNA–Protein interactions for RNA: ENST00000539893.5

VTCN1-207, Transcript of V-set domain containing T cell activation inhibitor 1, humanhuman

TSL 2 BASIC

Gene VTCN1, Length 2,719 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTCN1-207ENST00000539893 NISCHQ9Y2I1 1504 aa14.98□□□□□ -0.01
VTCN1-207ENST00000539893 CHIC1Q5VXU3 224 aa13.47□□□□□ -0.25
VTCN1-207ENST00000539893 AEBP2Q6ZN18 517 aaPredicted RBP13.25□□□□□ -0.29
VTCN1-207ENST00000539893 CCDC180Q9P1Z9 1646 aa12.97□□□□□ -0.33
VTCN1-207ENST00000539893 ZCCHC6Q5VYS8 1495 aaKnown RBP12.67□□□□□ -0.38
VTCN1-207ENST00000539893 DCAF1Q9Y4B6 1507 aa12.41□□□□□ -0.42
VTCN1-207ENST00000539893 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
VTCN1-207ENST00000539893 PHF23Q9BUL5 403 aaPredicted RBP12.31□□□□□ -0.44
VTCN1-207ENST00000539893 MYO15BQ96JP2 1530 aa12.13□□□□□ -0.47
VTCN1-207ENST00000539893 DCAF8L2P0C7V8 631 aa12.11□□□□□ -0.47
VTCN1-207ENST00000539893 SUPT5HO00267 1087 aaKnown RBP12.04□□□□□ -0.48
VTCN1-207ENST00000539893 EHMT2Q96KQ7 1210 aa11.96□□□□□ -0.49
VTCN1-207ENST00000539893 ABCC9O60706 1549 aa11.95□□□□□ -0.5
VTCN1-207ENST00000539893 NACADO15069 1562 aa11.94□□□□□ -0.5
VTCN1-207ENST00000539893 SCRIBQ14160 1630 aa11.93□□□□□ -0.5
VTCN1-207ENST00000539893 RB1CC1Q8TDY2 1594 aa11.75□□□□□ -0.53
VTCN1-207ENST00000539893 RSF1Q96T23 1441 aaPredicted RBP11.73□□□□□ -0.53
VTCN1-207ENST00000539893 UNC13AQ9UPW8 1703 aa11.68□□□□□ -0.54
VTCN1-207ENST00000539893 CECR2Q9BXF3 1484 aa11.61□□□□□ -0.55
VTCN1-207ENST00000539893 MROH2BQ7Z745 1585 aa11.6□□□□□ -0.55
VTCN1-207ENST00000539893 WIZO95785 1651 aa11.56□□□□□ -0.56
VTCN1-207ENST00000539893 BAZ1AQ9NRL2 1556 aaPredicted RBP11.54□□□□□ -0.56
VTCN1-207ENST00000539893 SLC24A1O60721 1099 aa11.5□□□□□ -0.57
VTCN1-207ENST00000539893 SMARCA4P51532 1647 aa11.48□□□□□ -0.57
VTCN1-207ENST00000539893 BICRAQ9NZM4 1560 aa11.46□□□□□ -0.58
VTCN1-207ENST00000539893 EIF4G1Q04637 1599 aaKnown RBP11.44□□□□□ -0.58
VTCN1-207ENST00000539893 PLPPR3Q6T4P5 718 aa11.44□□□□□ -0.58
VTCN1-207ENST00000539893 TOP2AP11388 1531 aaKnown RBP11.41□□□□□ -0.58
VTCN1-207ENST00000539893 KCNA4P22459 653 aa11.37□□□□□ -0.59
VTCN1-207ENST00000539893 SMARCA2P51531 1590 aa11.34□□□□□ -0.59
VTCN1-207ENST00000539893 PEG3Q9GZU2 1588 aa11.33□□□□□ -0.6
VTCN1-207ENST00000539893 LOC105371045A0A1W2PR82 267 aa11.3□□□□□ -0.6
VTCN1-207ENST00000539893 TRIM41Q8WV44 630 aa11.29□□□□□ -0.6
VTCN1-207ENST00000539893 CCDC88BA6NC98 1476 aa11.28□□□□□ -0.6
VTCN1-207ENST00000539893 PABPN1Q86U42 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
VTCN1-207ENST00000539893 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
VTCN1-207ENST00000539893 ABCC8Q09428 1581 aa11.17□□□□□ -0.62
VTCN1-207ENST00000539893 ATAD2BQ9ULI0 1458 aa11.16□□□□□ -0.62
VTCN1-207ENST00000539893 ADRA2BP18089 450 aa11.12□□□□□ -0.63
VTCN1-207ENST00000539893 PCGF6Q9BYE7 350 aa11.11□□□□□ -0.63
VTCN1-207ENST00000539893 HRCP23327 699 aa11.11□□□□□ -0.63
VTCN1-207ENST00000539893 BAZ1BQ9UIG0 1483 aaKnown RBP11.1□□□□□ -0.63
VTCN1-207ENST00000539893 FAM9AQ8IZU1 332 aaPredicted RBP11.09□□□□□ -0.63
VTCN1-207ENST00000539893 RTN4Q9NQC3 1192 aaKnown RBP11.09□□□□□ -0.63
VTCN1-207ENST00000539893 HMGXB3Q12766 1538 aa11.05□□□□□ -0.64
VTCN1-207ENST00000539893 TRIM26Q12899 539 aaPredicted RBP11.04□□□□□ -0.64
VTCN1-207ENST00000539893 EEA1Q15075 1411 aa11.03□□□□□ -0.64
VTCN1-207ENST00000539893 SYNJ1O43426 1573 aa11.02□□□□□ -0.64
VTCN1-207ENST00000539893 WRNQ14191 1432 aaPredicted RBP eCLIP11.01□□□□□ -0.65
VTCN1-207ENST00000539893 NCAPD3P42695 1498 aa11□□□□□ -0.65
VTCN1-207ENST00000539893 SOGA1O94964 1423 aa11□□□□□ -0.65
VTCN1-207ENST00000539893 BIVM-ERCC5R4GMW8 1640 aa10.96□□□□□ -0.65
VTCN1-207ENST00000539893 RUSC2Q8N2Y8 1516 aa10.96□□□□□ -0.65
VTCN1-207ENST00000539893 PRDM2Q13029 1718 aa10.96□□□□□ -0.66
VTCN1-207ENST00000539893 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
VTCN1-207ENST00000539893 KIF21BO75037 1637 aa10.94□□□□□ -0.66
VTCN1-207ENST00000539893 TNIKQ9UKE5 1360 aa10.92□□□□□ -0.66
VTCN1-207ENST00000539893 GOLGA3Q08378 1498 aa10.9□□□□□ -0.66
VTCN1-207ENST00000539893 CEP162Q5TB80 1403 aa10.9□□□□□ -0.66
VTCN1-207ENST00000539893 CEP164Q9UPV0 1460 aa10.86□□□□□ -0.67
VTCN1-207ENST00000539893 CFTRP13569 1480 aa10.86□□□□□ -0.67
VTCN1-207ENST00000539893 CUX1P39880 1505 aa10.83□□□□□ -0.68
VTCN1-207ENST00000539893 CC2D2AQ9P2K1 1620 aa10.8□□□□□ -0.68
VTCN1-207ENST00000539893 PPARGC1BQ86YN6 1023 aaKnown RBP10.79□□□□□ -0.68
VTCN1-207ENST00000539893 ERICH3Q5RHP9 1530 aa10.78□□□□□ -0.68
VTCN1-207ENST00000539893 RAPGEF2Q9Y4G8 1499 aa10.77□□□□□ -0.69
VTCN1-207ENST00000539893 ZEB1P37275 1124 aaPredicted RBP10.75□□□□□ -0.69
VTCN1-207ENST00000539893 UBTFP17480 764 aaKnown RBP10.75□□□□□ -0.69
VTCN1-207ENST00000539893 PRXQ9BXM0 1461 aa10.75□□□□□ -0.69
VTCN1-207ENST00000539893 SLC4A1APQ9BWU0 796 aaKnown RBP10.73□□□□□ -0.69
VTCN1-207ENST00000539893 CLIP1P30622 1438 aa10.72□□□□□ -0.69
VTCN1-207ENST00000539893 CADPSQ9ULU8 1353 aa10.72□□□□□ -0.69
VTCN1-207ENST00000539893 VPS8Q8N3P4 1428 aa10.69□□□□□ -0.7
VTCN1-207ENST00000539893 KIF27Q86VH2 1401 aa10.68□□□□□ -0.7
VTCN1-207ENST00000539893 PPP6R1Q9UPN7 881 aa10.67□□□□□ -0.7
VTCN1-207ENST00000539893 ZBTB22O15209 634 aa10.65□□□□□ -0.7
VTCN1-207ENST00000539893 ARAP1Q96P48 1450 aa10.63□□□□□ -0.71
VTCN1-207ENST00000539893 FGD5Q6ZNL6 1462 aa10.63□□□□□ -0.71
VTCN1-207ENST00000539893 DNMBPQ6XZF7 1577 aa10.62□□□□□ -0.71
VTCN1-207ENST00000539893 FANCD2Q9BXW9 1451 aa10.62□□□□□ -0.71
VTCN1-207ENST00000539893 LAMC3Q9Y6N6 1575 aa10.6□□□□□ -0.71
VTCN1-207ENST00000539893 CUX2O14529 1486 aa10.6□□□□□ -0.71
VTCN1-207ENST00000539893 WDR97A6NE52 1622 aa10.58□□□□□ -0.72
VTCN1-207ENST00000539893 IGF1RP08069 1367 aa10.57□□□□□ -0.72
VTCN1-207ENST00000539893 TOPBP1Q92547 1522 aa10.56□□□□□ -0.72
VTCN1-207ENST00000539893 NESP48681 1621 aa10.56□□□□□ -0.72
VTCN1-207ENST00000539893 ABCA10Q8WWZ4 1543 aa10.55□□□□□ -0.72
VTCN1-207ENST00000539893 ARHGAP35Q9NRY4 1499 aa10.55□□□□□ -0.72
VTCN1-207ENST00000539893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.55□□□□□ -0.72
VTCN1-207ENST00000539893 TTBK1Q5TCY1 1321 aaPredicted RBP10.54□□□□□ -0.72
VTCN1-207ENST00000539893 POLA1P09884 1462 aaPredicted RBP10.53□□□□□ -0.72
VTCN1-207ENST00000539893 CUL7Q14999 1698 aa10.53□□□□□ -0.72
VTCN1-207ENST00000539893 CCER1Q8TC90 406 aaPredicted RBP10.51□□□□□ -0.73
VTCN1-207ENST00000539893 SENP3Q9H4L4 574 aaPredicted RBP10.51□□□□□ -0.73
VTCN1-207ENST00000539893 CARMIL1Q5VZK9 1371 aa10.51□□□□□ -0.73
VTCN1-207ENST00000539893 CTTNBP2Q8WZ74 1663 aa10.51□□□□□ -0.73
VTCN1-207ENST00000539893 KIF21AQ7Z4S6 1674 aa10.5□□□□□ -0.73
VTCN1-207ENST00000539893 URB2Q14146 1524 aaKnown RBP10.5□□□□□ -0.73
VTCN1-207ENST00000539893 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
VTCN1-207ENST00000539893 ABCA5Q8WWZ7 1642 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms