RNA–Protein interactions for RNA: ENST00000539426.5

DDB1-214, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-214ENST00000539426 KIF13AQ9H1H9 1805 aa19.16■□□□□ 0.66
DDB1-214ENST00000539426 KIF27Q86VH2 1401 aa19.15■□□□□ 0.66
DDB1-214ENST00000539426 CUL7Q14999 1698 aa19.14■□□□□ 0.65
DDB1-214ENST00000539426 KIAA0586Q9BVV6 1533 aa19.1■□□□□ 0.65
DDB1-214ENST00000539426 ADCY10Q96PN6 1610 aa19.07■□□□□ 0.64
DDB1-214ENST00000539426 CARMIL1Q5VZK9 1371 aa19.03■□□□□ 0.64
DDB1-214ENST00000539426 MAPKBP1O60336 1514 aa19.02■□□□□ 0.64
DDB1-214ENST00000539426 ABCC10Q5T3U5 1492 aa19.01■□□□□ 0.63
DDB1-214ENST00000539426 DIP2BQ9P265 1576 aa18.99■□□□□ 0.63
DDB1-214ENST00000539426 FAM69CQ0P6D2 419 aa18.97■□□□□ 0.63
DDB1-214ENST00000539426 AEBP2Q6ZN18 517 aaPredicted RBP18.97■□□□□ 0.63
DDB1-214ENST00000539426 NPM1P06748 294 aaKnown RBP eCLIP18.96■□□□□ 0.63
DDB1-214ENST00000539426 IQGAP2Q13576 1575 aa18.94■□□□□ 0.62
DDB1-214ENST00000539426 PTPRGP23470 1445 aa18.92■□□□□ 0.62
DDB1-214ENST00000539426 TSPOAP1O95153 1857 aa18.89■□□□□ 0.61
DDB1-214ENST00000539426 TTBK1Q5TCY1 1321 aaPredicted RBP18.89■□□□□ 0.61
DDB1-214ENST00000539426 TNIKQ9UKE5 1360 aa18.89■□□□□ 0.61
DDB1-214ENST00000539426 CARMIL2Q6F5E8 1435 aa18.89■□□□□ 0.61
DDB1-214ENST00000539426 DISP1Q96F81 1524 aa18.86■□□□□ 0.61
DDB1-214ENST00000539426 ABCC2Q92887 1545 aa18.85■□□□□ 0.61
DDB1-214ENST00000539426 RAPGEF2Q9Y4G8 1499 aa18.84■□□□□ 0.61
DDB1-214ENST00000539426 KDM6BO15054 1643 aa18.82■□□□□ 0.6
DDB1-214ENST00000539426 UGGT2Q9NYU1 1516 aa18.81■□□□□ 0.6
DDB1-214ENST00000539426 UHRF1BP1LA0JNW5 1464 aa18.81■□□□□ 0.6
DDB1-214ENST00000539426 ASXL2Q76L83 1435 aa18.79■□□□□ 0.6
DDB1-214ENST00000539426 UACAQ9BZF9 1416 aa18.79■□□□□ 0.6
DDB1-214ENST00000539426 KIAA0556O60303 1618 aa18.78■□□□□ 0.6
DDB1-214ENST00000539426 PPRC1Q5VV67 1664 aaKnown RBP18.77■□□□□ 0.6
DDB1-214ENST00000539426 PLB1Q6P1J6 1458 aa18.76■□□□□ 0.59
DDB1-214ENST00000539426 GLI2P10070 1586 aa18.75■□□□□ 0.59
DDB1-214ENST00000539426 CTTNBP2Q8WZ74 1663 aa18.75■□□□□ 0.59
DDB1-214ENST00000539426 KDM5BQ9UGL1 1544 aa18.74■□□□□ 0.59
DDB1-214ENST00000539426 ZCCHC11Q5TAX3 1644 aaKnown RBP18.72■□□□□ 0.59
DDB1-214ENST00000539426 EPRSP07814 1512 aaKnown RBP18.69■□□□□ 0.58
DDB1-214ENST00000539426 MAP3K4Q9Y6R4 1608 aa18.67■□□□□ 0.58
DDB1-214ENST00000539426 PRXQ9BXM0 1461 aa18.66■□□□□ 0.58
DDB1-214ENST00000539426 KDM4FA0A1W2PPD8 638 aa18.64■□□□□ 0.57
DDB1-214ENST00000539426 COL17A1Q9UMD9 1497 aaPredicted RBP18.62■□□□□ 0.57
DDB1-214ENST00000539426 ABCA8O94911 1581 aa18.61■□□□□ 0.57
DDB1-214ENST00000539426 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
DDB1-214ENST00000539426 WDR7Q9Y4E6 1490 aa18.6■□□□□ 0.57
DDB1-214ENST00000539426 TEX14Q8IWB6 1497 aa18.56■□□□□ 0.56
DDB1-214ENST00000539426 CFAP43Q8NDM7 1665 aa18.51■□□□□ 0.55
DDB1-214ENST00000539426 ADGRL1O94910 1474 aa18.5■□□□□ 0.55
DDB1-214ENST00000539426 KCNH8Q96L42 1107 aa18.48■□□□□ 0.55
DDB1-214ENST00000539426 MAGI3Q5TCQ9 1506 aa18.48■□□□□ 0.55
DDB1-214ENST00000539426 CD109Q6YHK3 1445 aa18.48■□□□□ 0.55
DDB1-214ENST00000539426 P3H3Q8IVL6 736 aa18.47■□□□□ 0.55
DDB1-214ENST00000539426 SAMD9Q5K651 1589 aa18.47■□□□□ 0.55
DDB1-214ENST00000539426 CSRNP3Q8WYN3 585 aa18.46■□□□□ 0.55
DDB1-214ENST00000539426 ARID3CA6NKF2 412 aa18.44■□□□□ 0.54
DDB1-214ENST00000539426 ATP10BO94823 1461 aa18.44■□□□□ 0.54
DDB1-214ENST00000539426 RAPGEF6Q8TEU7 1601 aa18.4■□□□□ 0.54
DDB1-214ENST00000539426 EEA1Q15075 1411 aa18.38■□□□□ 0.53
DDB1-214ENST00000539426 ABCA9Q8IUA7 1624 aa18.36■□□□□ 0.53
DDB1-214ENST00000539426 ARAP3Q8WWN8 1544 aa18.33■□□□□ 0.53
DDB1-214ENST00000539426 NUP153P49790 1475 aaKnown RBP18.33■□□□□ 0.53
DDB1-214ENST00000539426 FHOD3Q2V2M9 1422 aa18.33■□□□□ 0.53
DDB1-214ENST00000539426 FAM9AQ8IZU1 332 aaPredicted RBP18.33■□□□□ 0.52
DDB1-214ENST00000539426 KIF21BO75037 1637 aa18.33■□□□□ 0.52
DDB1-214ENST00000539426 RANGAP1P46060 587 aaPredicted RBP18.32■□□□□ 0.52
DDB1-214ENST00000539426 HECW2Q9P2P5 1572 aa18.26■□□□□ 0.51
DDB1-214ENST00000539426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.26■□□□□ 0.51
DDB1-214ENST00000539426 HNRNPUL2Q1KMD3 747 aaKnown RBP18.26■□□□□ 0.51
DDB1-214ENST00000539426 NEO1Q92859 1461 aa18.25■□□□□ 0.51
DDB1-214ENST00000539426 PHLDB1Q86UU1 1377 aa18.24■□□□□ 0.51
DDB1-214ENST00000539426 FRMPD1Q5SYB0 1578 aa18.24■□□□□ 0.51
DDB1-214ENST00000539426 EFCAB5A4FU69 1503 aa18.23■□□□□ 0.51
DDB1-214ENST00000539426 RAPGEF3O95398 923 aa18.22■□□□□ 0.51
DDB1-214ENST00000539426 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.18■□□□□ 0.56e-6■■□□□ 13.3
DDB1-214ENST00000539426 TTC37Q6PGP7 1564 aa18.17■□□□□ 0.5
DDB1-214ENST00000539426 ADAMTSL3P82987 1691 aa18.17■□□□□ 0.5
DDB1-214ENST00000539426 PLEKHD1A6NEE1 506 aa18.16■□□□□ 0.5
DDB1-214ENST00000539426 CDK13Q14004 1512 aaKnown RBP18.16■□□□□ 0.5
DDB1-214ENST00000539426 EHMT2Q96KQ7 1210 aa18.15■□□□□ 0.5
DDB1-214ENST00000539426 RICTORQ6R327 1708 aa18.15■□□□□ 0.5
DDB1-214ENST00000539426 BCORL1Q5H9F3 1711 aa18.13■□□□□ 0.49
DDB1-214ENST00000539426 ARHGEF40Q8TER5 1519 aa18.13■□□□□ 0.49
DDB1-214ENST00000539426 AKNAQ7Z591 1439 aa18.12■□□□□ 0.49
DDB1-214ENST00000539426 FANCAO15360 1455 aa18.12■□□□□ 0.49
DDB1-214ENST00000539426 DENND4BO75064 1496 aaPredicted RBP18.12■□□□□ 0.49
DDB1-214ENST00000539426 CFAP74Q9C0B2 1584 aa18.12■□□□□ 0.49
DDB1-214ENST00000539426 CHIC1Q5VXU3 224 aa18.11■□□□□ 0.49
DDB1-214ENST00000539426 ILDR1Q86SU0 546 aaPredicted RBP18.11■□□□□ 0.49
DDB1-214ENST00000539426 PTPRMP28827 1452 aa18.11■□□□□ 0.49
DDB1-214ENST00000539426 ARHGAP35Q9NRY4 1499 aa18.1■□□□□ 0.49
DDB1-214ENST00000539426 MADDQ8WXG6 1647 aa18.09■□□□□ 0.49
DDB1-214ENST00000539426 UBTFP17480 764 aaKnown RBP18.09■□□□□ 0.49
DDB1-214ENST00000539426 HECW1Q76N89 1606 aa18.07■□□□□ 0.48
DDB1-214ENST00000539426 ZMYM4Q5VZL5 1548 aa18.06■□□□□ 0.48
DDB1-214ENST00000539426 SIGLEC1Q9BZZ2 1709 aa18.06■□□□□ 0.48
DDB1-214ENST00000539426 FMN1Q68DA7 1419 aa18.06■□□□□ 0.48
DDB1-214ENST00000539426 ARID4BQ4LE39 1312 aaPredicted RBP18.05■□□□□ 0.48
DDB1-214ENST00000539426 YEATS2Q9ULM3 1422 aa18.03■□□□□ 0.48
DDB1-214ENST00000539426 LRRIQ1Q96JM4 1722 aa18.03■□□□□ 0.48
DDB1-214ENST00000539426 RIMS1Q86UR5 1692 aaKnown RBP18.03■□□□□ 0.48
DDB1-214ENST00000539426 KIF14Q15058 1648 aa18.02■□□□□ 0.48
DDB1-214ENST00000539426 PLCH2O75038 1416 aa18.02■□□□□ 0.48
DDB1-214ENST00000539426 ZFYVE16Q7Z3T8 1539 aa18.02■□□□□ 0.47
DDB1-214ENST00000539426 MYO5CQ9NQX4 1742 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms