RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 KIF27Q86VH2 1401 aa30.27■■■□□ 2.44
PDCD2-207ENST00000539212 KIF13AQ9H1H9 1805 aa30.26■■■□□ 2.44
PDCD2-207ENST00000539212 IGF1RP08069 1367 aa30.26■■■□□ 2.43
PDCD2-207ENST00000539212 KIAA0586Q9BVV6 1533 aa30.16■■■□□ 2.42
PDCD2-207ENST00000539212 ADCY10Q96PN6 1610 aa30.14■■■□□ 2.42
PDCD2-207ENST00000539212 CARMIL1Q5VZK9 1371 aa30.05■■■□□ 2.4
PDCD2-207ENST00000539212 MAPKBP1O60336 1514 aa30.01■■■□□ 2.39
PDCD2-207ENST00000539212 DIP2BQ9P265 1576 aa29.98■■■□□ 2.39
PDCD2-207ENST00000539212 IQGAP2Q13576 1575 aa29.96■■■□□ 2.39
PDCD2-207ENST00000539212 ABCC10Q5T3U5 1492 aa29.95■■■□□ 2.39
PDCD2-207ENST00000539212 NPM1P06748 294 aaKnown RBP eCLIP29.92■■■□□ 2.38
PDCD2-207ENST00000539212 TTBK1Q5TCY1 1321 aaPredicted RBP29.91■■■□□ 2.38
PDCD2-207ENST00000539212 FAM69CQ0P6D2 419 aa29.89■■■□□ 2.38
PDCD2-207ENST00000539212 TSPOAP1O95153 1857 aa29.87■■■□□ 2.37
PDCD2-207ENST00000539212 PTPRGP23470 1445 aa29.87■■■□□ 2.37
PDCD2-207ENST00000539212 CARMIL2Q6F5E8 1435 aa29.82■■■□□ 2.36
PDCD2-207ENST00000539212 DISP1Q96F81 1524 aa29.81■■■□□ 2.36
PDCD2-207ENST00000539212 RAPGEF2Q9Y4G8 1499 aa29.81■■■□□ 2.36
PDCD2-207ENST00000539212 TNIKQ9UKE5 1360 aa29.81■■■□□ 2.36
PDCD2-207ENST00000539212 AEBP2Q6ZN18 517 aaPredicted RBP29.8■■■□□ 2.36
PDCD2-207ENST00000539212 CTTNBP2Q8WZ74 1663 aa29.75■■■□□ 2.35
PDCD2-207ENST00000539212 ABCC2Q92887 1545 aa29.75■■■□□ 2.35
PDCD2-207ENST00000539212 UGGT2Q9NYU1 1516 aa29.73■■■□□ 2.35
PDCD2-207ENST00000539212 KIAA0556O60303 1618 aa29.73■■■□□ 2.35
PDCD2-207ENST00000539212 KDM6BO15054 1643 aa29.71■■■□□ 2.35
PDCD2-207ENST00000539212 UHRF1BP1LA0JNW5 1464 aa29.68■■■□□ 2.34
PDCD2-207ENST00000539212 ASXL2Q76L83 1435 aa29.66■■■□□ 2.34
PDCD2-207ENST00000539212 UACAQ9BZF9 1416 aa29.66■■■□□ 2.34
PDCD2-207ENST00000539212 PPRC1Q5VV67 1664 aaKnown RBP29.65■■■□□ 2.34
PDCD2-207ENST00000539212 ZCCHC11Q5TAX3 1644 aaKnown RBP29.63■■■□□ 2.33
PDCD2-207ENST00000539212 GLI2P10070 1586 aa29.58■■■□□ 2.33
PDCD2-207ENST00000539212 PLB1Q6P1J6 1458 aa29.58■■■□□ 2.33
PDCD2-207ENST00000539212 KDM5BQ9UGL1 1544 aa29.56■■■□□ 2.32
PDCD2-207ENST00000539212 PRXQ9BXM0 1461 aa29.53■■■□□ 2.32
PDCD2-207ENST00000539212 MAP3K4Q9Y6R4 1608 aa29.49■■■□□ 2.31
PDCD2-207ENST00000539212 EPRSP07814 1512 aaKnown RBP29.49■■■□□ 2.31
PDCD2-207ENST00000539212 ABCA8O94911 1581 aa29.43■■■□□ 2.3
PDCD2-207ENST00000539212 GOLGA3Q08378 1498 aa29.42■■■□□ 2.3
PDCD2-207ENST00000539212 WDR7Q9Y4E6 1490 aa29.37■■■□□ 2.29
PDCD2-207ENST00000539212 COL17A1Q9UMD9 1497 aaPredicted RBP29.34■■■□□ 2.29
PDCD2-207ENST00000539212 KDM4FA0A1W2PPD8 638 aa29.32■■■□□ 2.28
PDCD2-207ENST00000539212 TEX14Q8IWB6 1497 aa29.28■■■□□ 2.28
PDCD2-207ENST00000539212 SAMD9Q5K651 1589 aa29.26■■■□□ 2.28
PDCD2-207ENST00000539212 CFAP43Q8NDM7 1665 aa29.26■■■□□ 2.27
PDCD2-207ENST00000539212 P3H3Q8IVL6 736 aa29.25■■■□□ 2.27
PDCD2-207ENST00000539212 CSRNP3Q8WYN3 585 aa29.22■■■□□ 2.27
PDCD2-207ENST00000539212 ARID3CA6NKF2 412 aa29.2■■■□□ 2.26
PDCD2-207ENST00000539212 KCNH8Q96L42 1107 aa29.18■■■□□ 2.26
PDCD2-207ENST00000539212 ADGRL1O94910 1474 aa29.17■■■□□ 2.26
PDCD2-207ENST00000539212 CD109Q6YHK3 1445 aa29.15■■■□□ 2.26
PDCD2-207ENST00000539212 RAPGEF6Q8TEU7 1601 aa29.14■■■□□ 2.26
PDCD2-207ENST00000539212 MAGI3Q5TCQ9 1506 aa29.14■■■□□ 2.25
PDCD2-207ENST00000539212 ATP10BO94823 1461 aa29.12■■■□□ 2.25
PDCD2-207ENST00000539212 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
PDCD2-207ENST00000539212 EEA1Q15075 1411 aa29.1■■■□□ 2.25
PDCD2-207ENST00000539212 FAM9AQ8IZU1 332 aaPredicted RBP29.09■■■□□ 2.25
PDCD2-207ENST00000539212 RANGAP1P46060 587 aaPredicted RBP29.07■■■□□ 2.24
PDCD2-207ENST00000539212 FHOD3Q2V2M9 1422 aa29.03■■■□□ 2.24
PDCD2-207ENST00000539212 ABCA9Q8IUA7 1624 aa29.03■■■□□ 2.24
PDCD2-207ENST00000539212 KIF21BO75037 1637 aa29.02■■■□□ 2.24
PDCD2-207ENST00000539212 NUP153P49790 1475 aaKnown RBP28.99■■■□□ 2.23
PDCD2-207ENST00000539212 ARAP3Q8WWN8 1544 aa28.9■■■□□ 2.22
PDCD2-207ENST00000539212 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.9■■■□□ 2.22
PDCD2-207ENST00000539212 HNRNPUL2Q1KMD3 747 aaKnown RBP28.9■■■□□ 2.22
PDCD2-207ENST00000539212 EFCAB5A4FU69 1503 aa28.89■■■□□ 2.22
PDCD2-207ENST00000539212 EHMT2Q96KQ7 1210 aa28.86■■■□□ 2.21
PDCD2-207ENST00000539212 FRMPD1Q5SYB0 1578 aa28.83■■■□□ 2.21
PDCD2-207ENST00000539212 HECW2Q9P2P5 1572 aa28.79■■■□□ 2.2
PDCD2-207ENST00000539212 NEO1Q92859 1461 aa28.78■■■□□ 2.2
PDCD2-207ENST00000539212 CDK13Q14004 1512 aaKnown RBP28.78■■■□□ 2.2
PDCD2-207ENST00000539212 TTC37Q6PGP7 1564 aa28.77■■■□□ 2.2
PDCD2-207ENST00000539212 RAPGEF3O95398 923 aa28.75■■■□□ 2.19
PDCD2-207ENST00000539212 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.74■■■□□ 2.195e-36■■■□□ 15.9
PDCD2-207ENST00000539212 PHLDB1Q86UU1 1377 aa28.73■■■□□ 2.19
PDCD2-207ENST00000539212 RICTORQ6R327 1708 aa28.71■■■□□ 2.19
PDCD2-207ENST00000539212 PLEKHD1A6NEE1 506 aa28.69■■■□□ 2.18
PDCD2-207ENST00000539212 UBTFP17480 764 aaKnown RBP28.68■■■□□ 2.18
PDCD2-207ENST00000539212 ARHGAP35Q9NRY4 1499 aa28.67■■■□□ 2.18
PDCD2-207ENST00000539212 ADAMTSL3P82987 1691 aa28.67■■■□□ 2.18
PDCD2-207ENST00000539212 CFAP74Q9C0B2 1584 aa28.67■■■□□ 2.18
PDCD2-207ENST00000539212 HECW1Q76N89 1606 aa28.65■■■□□ 2.18
PDCD2-207ENST00000539212 FANCAO15360 1455 aa28.64■■■□□ 2.17
PDCD2-207ENST00000539212 LRRIQ1Q96JM4 1722 aa28.63■■■□□ 2.17
PDCD2-207ENST00000539212 ARHGEF40Q8TER5 1519 aa28.63■■■□□ 2.17
PDCD2-207ENST00000539212 BCORL1Q5H9F3 1711 aa28.63■■■□□ 2.17
PDCD2-207ENST00000539212 AKNAQ7Z591 1439 aa28.61■■■□□ 2.17
PDCD2-207ENST00000539212 DENND4BO75064 1496 aaPredicted RBP28.59■■■□□ 2.17
PDCD2-207ENST00000539212 MADDQ8WXG6 1647 aa28.59■■■□□ 2.17
PDCD2-207ENST00000539212 FMN1Q68DA7 1419 aa28.57■■■□□ 2.16
PDCD2-207ENST00000539212 KIF14Q15058 1648 aa28.56■■■□□ 2.16
PDCD2-207ENST00000539212 SIGLEC1Q9BZZ2 1709 aa28.56■■■□□ 2.16
PDCD2-207ENST00000539212 ATP1B4Q9UN42 357 aaPredicted RBP28.56■■■□□ 2.16
PDCD2-207ENST00000539212 MYO5CQ9NQX4 1742 aa28.55■■■□□ 2.16
PDCD2-207ENST00000539212 PTPRMP28827 1452 aa28.53■■■□□ 2.16
PDCD2-207ENST00000539212 ZMYM4Q5VZL5 1548 aa28.52■■■□□ 2.16
PDCD2-207ENST00000539212 RIMS1Q86UR5 1692 aaKnown RBP28.51■■■□□ 2.15
PDCD2-207ENST00000539212 ARID4BQ4LE39 1312 aaPredicted RBP28.49■■■□□ 2.15
PDCD2-207ENST00000539212 ZFYVE16Q7Z3T8 1539 aa28.48■■■□□ 2.15
PDCD2-207ENST00000539212 PLCH2O75038 1416 aa28.46■■■□□ 2.15
PDCD2-207ENST00000539212 YEATS2Q9ULM3 1422 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms