RNA–Protein interactions for RNA: ENST00000538971.6

ERC1-208, Transcript of ELKS/RAB6-interacting/CAST family member 1, human

TSL 2

Gene ERC1, Length 2,267 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERC1-208	ENST00000538971	RGL2	O15211	777 aa		11.43	□□□□□ -0.58
ERC1-208	ENST00000538971	CENPB	P07199	599 aa	Predicted RBP	11.42	□□□□□ -0.58
ERC1-208	ENST00000538971	ATAD2B	Q9ULI0	1458 aa		11.41	□□□□□ -0.58
ERC1-208	ENST00000538971	WIZ	O95785	1651 aa		11.4	□□□□□ -0.58
ERC1-208	ENST00000538971	SMARCA2	P51531	1590 aa		11.38	□□□□□ -0.59
ERC1-208	ENST00000538971	PEG3	Q9GZU2	1588 aa		11.38	□□□□□ -0.59
ERC1-208	ENST00000538971	RSF1	Q96T23	1441 aa	Predicted RBP	11.37	□□□□□ -0.59
ERC1-208	ENST00000538971	LOC105371045	A0A1W2PR82	267 aa		11.37	□□□□□ -0.59
ERC1-208	ENST00000538971	NEUROD1	Q13562	356 aa		11.37	□□□□□ -0.59
ERC1-208	ENST00000538971	NCAPD3	P42695	1498 aa		11.35	□□□□□ -0.59
ERC1-208	ENST00000538971	BRPF1	P55201	1214 aa	Predicted RBP	11.35	□□□□□ -0.59
ERC1-208	ENST00000538971	SPDYE4	A6NLX3	237 aa		11.34	□□□□□ -0.59
ERC1-208	ENST00000538971	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.34	□□□□□ -0.59
ERC1-208	ENST00000538971	HMGXB3	Q12766	1538 aa		11.33	□□□□□ -0.6
ERC1-208	ENST00000538971	ARID3A	Q99856	593 aa		11.33	□□□□□ -0.6
ERC1-208	ENST00000538971	CHGA	P10645	457 aa	Known RBP	11.3	□□□□□ -0.6
ERC1-208	ENST00000538971	PROM2	Q8N271	834 aa		11.23	□□□□□ -0.61
ERC1-208	ENST00000538971	TOP2A	P11388	1531 aa	Known RBP	11.23	□□□□□ -0.61
ERC1-208	ENST00000538971	DIEXF	Q68CQ4	756 aa	Known RBP	11.19	□□□□□ -0.62
ERC1-208	ENST00000538971	EIF5B	O60841	1220 aa	Known RBP	11.16	□□□□□ -0.62
ERC1-208	ENST00000538971	NEUROD2	Q15784	382 aa		11.16	□□□□□ -0.62
ERC1-208	ENST00000538971	NES	P48681	1621 aa		11.14	□□□□□ -0.63
ERC1-208	ENST00000538971	C1orf115	Q9H7X2	142 aa		11.14	□□□□□ -0.63
ERC1-208	ENST00000538971	SPOCK2	Q92563	424 aa		11.11	□□□□□ -0.63
ERC1-208	ENST00000538971	CCDC88B	A6NC98	1476 aa		11.11	□□□□□ -0.63
ERC1-208	ENST00000538971	CLSPN	Q9HAW4	1339 aa		11.1	□□□□□ -0.63
ERC1-208	ENST00000538971	LMOD2	Q6P5Q4	547 aa		11.1	□□□□□ -0.63
ERC1-208	ENST00000538971	NECTIN2	Q92692	538 aa		11.09	□□□□□ -0.63
ERC1-208	ENST00000538971	TRIM41	Q8WV44	630 aa		11.09	□□□□□ -0.63
ERC1-208	ENST00000538971	CCDC9	Q9Y3X0	531 aa	Known RBP	11.09	□□□□□ -0.63
ERC1-208	ENST00000538971	HOXD11	P31277	338 aa	Predicted RBP	11.06	□□□□□ -0.64
ERC1-208	ENST00000538971	CCER1	Q8TC90	406 aa	Predicted RBP	11.06	□□□□□ -0.64
ERC1-208	ENST00000538971	MKRN4P	Q13434	485 aa	Predicted RBP	11.06	□□□□□ -0.64
ERC1-208	ENST00000538971	LAMC3	Q9Y6N6	1575 aa		11.06	□□□□□ -0.64
ERC1-208	ENST00000538971	ARID3C	A6NKF2	412 aa		11.05	□□□□□ -0.64
ERC1-208	ENST00000538971	IGSF3	O75054	1194 aa		11.05	□□□□□ -0.64
ERC1-208	ENST00000538971	CADPS	Q9ULU8	1353 aa		11.04	□□□□□ -0.64
ERC1-208	ENST00000538971	ZMYND15	Q9H091	742 aa		11.04	□□□□□ -0.64
ERC1-208	ENST00000538971	KIF21A	Q7Z4S6	1674 aa		11.03	□□□□□ -0.64
ERC1-208	ENST00000538971	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.02	□□□□□ -0.64
ERC1-208	ENST00000538971	RSPH6A	Q9H0K4	717 aa		11.02	□□□□□ -0.65
ERC1-208	ENST00000538971	CFTR	P13569	1480 aa		11.01	□□□□□ -0.65
ERC1-208	ENST00000538971	ERCC6	Q03468	1493 aa		11.01	□□□□□ -0.65
ERC1-208	ENST00000538971	NKX1-1	Q15270	411 aa	Predicted RBP	11.01	□□□□□ -0.65
ERC1-208	ENST00000538971	ZNF316	A6NFI3	1004 aa	Predicted RBP	11	□□□□□ -0.65
ERC1-208	ENST00000538971	BCL11A	Q9H165	835 aa		11	□□□□□ -0.65
ERC1-208	ENST00000538971	PRDM2	Q13029	1718 aa		10.99	□□□□□ -0.65
ERC1-208	ENST00000538971	ZBTB7C	A1YPR0	619 aa		10.98	□□□□□ -0.65
ERC1-208	ENST00000538971	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.98	□□□□□ -0.65
ERC1-208	ENST00000538971	SLC24A3	Q9HC58	644 aa		10.98	□□□□□ -0.65
ERC1-208	ENST00000538971	ANP32E	Q9BTT0	268 aa		10.98	□□□□□ -0.65
ERC1-208	ENST00000538971	PDS5B	Q9NTI5	1447 aa		10.96	□□□□□ -0.66
ERC1-208	ENST00000538971	FANCD2	Q9BXW9	1451 aa		10.95	□□□□□ -0.66
ERC1-208	ENST00000538971	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.94	□□□□□ -0.66
ERC1-208	ENST00000538971	THOC2	Q8NI27	1593 aa	Known RBP	10.93	□□□□□ -0.66
ERC1-208	ENST00000538971	PDIA4	P13667	645 aa	Known RBP	10.93	□□□□□ -0.66
ERC1-208	ENST00000538971	HS6ST3	Q8IZP7	471 aa		10.93	□□□□□ -0.66
ERC1-208	ENST00000538971	CEP164	Q9UPV0	1460 aa		10.91	□□□□□ -0.66
ERC1-208	ENST00000538971	GTPBP6	O43824	516 aa	Predicted RBP	10.91	□□□□□ -0.66
ERC1-208	ENST00000538971	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.9	□□□□□ -0.67
ERC1-208	ENST00000538971	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.89	□□□□□ -0.67
ERC1-208	ENST00000538971	PLEKHG5	O94827	1062 aa		10.88	□□□□□ -0.67
ERC1-208	ENST00000538971	ZC3H15	Q8WU90	426 aa	Known RBP	10.88	□□□□□ -0.67
ERC1-208	ENST00000538971	KCNV2	Q8TDN2	545 aa		10.87	□□□□□ -0.67
ERC1-208	ENST00000538971	APBB1	O00213	710 aa		10.87	□□□□□ -0.67
ERC1-208	ENST00000538971	MRC2	Q9UBG0	1479 aa		10.87	□□□□□ -0.67
ERC1-208	ENST00000538971	FAM9A	Q8IZU1	332 aa	Predicted RBP	10.86	□□□□□ -0.67
ERC1-208	ENST00000538971	ZNF428	Q96B54	188 aa		10.85	□□□□□ -0.67
ERC1-208	ENST00000538971	URB2	Q14146	1524 aa	Known RBP	10.85	□□□□□ -0.67
ERC1-208	ENST00000538971	RNF25	Q96BH1	459 aa	Predicted RBP	10.84	□□□□□ -0.67
ERC1-208	ENST00000538971	YTHDC1	Q96MU7	727 aa	Known RBP	10.84	□□□□□ -0.67
ERC1-208	ENST00000538971	WDR62	O43379	1518 aa		10.84	□□□□□ -0.67
ERC1-208	ENST00000538971	MIER1	Q8N108	512 aa		10.83	□□□□□ -0.68
ERC1-208	ENST00000538971	KCTD17	Q8N5Z5	321 aa		10.82	□□□□□ -0.68
ERC1-208	ENST00000538971	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.81	□□□□□ -0.68
ERC1-208	ENST00000538971	SUPT16H	Q9Y5B9	1047 aa	Known RBP	10.81	□□□□□ -0.68
ERC1-208	ENST00000538971	ABCC8	Q09428	1581 aa		10.8	□□□□□ -0.68
ERC1-208	ENST00000538971	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.8	□□□□□ -0.68
ERC1-208	ENST00000538971	CUX2	O14529	1486 aa		10.8	□□□□□ -0.68
ERC1-208	ENST00000538971	TOPBP1	Q92547	1522 aa		10.79	□□□□□ -0.68
ERC1-208	ENST00000538971	RAD21	O60216	631 aa		10.78	□□□□□ -0.68
ERC1-208	ENST00000538971	IL27	Q8NEV9	243 aa		10.78	□□□□□ -0.68
ERC1-208	ENST00000538971	DNMBP	Q6XZF7	1577 aa		10.78	□□□□□ -0.68
ERC1-208	ENST00000538971	P3H3	Q8IVL6	736 aa		10.77	□□□□□ -0.69
ERC1-208	ENST00000538971	DMRT2	Q9Y5R5	561 aa		10.77	□□□□□ -0.69
ERC1-208	ENST00000538971	CUX1	P39880	1505 aa		10.77	□□□□□ -0.69
ERC1-208	ENST00000538971	PLCD3	Q8N3E9	789 aa		10.75	□□□□□ -0.69
ERC1-208	ENST00000538971	SYNJ1	O43426	1573 aa		10.74	□□□□□ -0.69
ERC1-208	ENST00000538971	CDK11B	P21127	795 aa	Known RBP	10.74	□□□□□ -0.69
ERC1-208	ENST00000538971	MKRN3	Q13064	507 aa	Known RBP	10.74	□□□□□ -0.69
ERC1-208	ENST00000538971	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.74	□□□□□ -0.69
ERC1-208	ENST00000538971		U3KPZ7	1027 aa	Predicted RBP	10.73	□□□□□ -0.69
ERC1-208	ENST00000538971	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.72	□□□□□ -0.69
ERC1-208	ENST00000538971	CCDC82	Q8N4S0	544 aa		10.72	□□□□□ -0.69
ERC1-208	ENST00000538971	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.72	□□□□□ -0.69
ERC1-208	ENST00000538971	MTMR7	Q9Y216	660 aa		10.72	□□□□□ -0.69
ERC1-208	ENST00000538971	POLA1	P09884	1462 aa	Predicted RBP	10.72	□□□□□ -0.69
ERC1-208	ENST00000538971	FGD5	Q6ZNL6	1462 aa		10.71	□□□□□ -0.69
ERC1-208	ENST00000538971	CHMP4A	Q9BY43	222 aa		10.71	□□□□□ -0.69
ERC1-208	ENST00000538971	BIVM-ERCC5	R4GMW8	1640 aa		10.69	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms