RNA–Protein interactions for RNA: ENST00000538971.6

ERC1-208, Transcript of ELKS/RAB6-interacting/CAST family member 1, human

TSL 2

Gene ERC1, Length 2,267 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERC1-208	ENST00000538971	CHIC1	Q5VXU3	224 aa		16.9	■□□□□ 0.3
ERC1-208	ENST00000538971	AEBP2	Q6ZN18	517 aa	Predicted RBP	16.21	■□□□□ 0.19
ERC1-208	ENST00000538971	EHMT2	Q96KQ7	1210 aa		15.26	■□□□□ 0.03
ERC1-208	ENST00000538971	PHF23	Q9BUL5	403 aa	Predicted RBP	15.25	■□□□□ 0.03
ERC1-208	ENST00000538971	SLC24A1	O60721	1099 aa		15.2	■□□□□ 0.02
ERC1-208	ENST00000538971	NISCH	Q9Y2I1	1504 aa		14.86	□□□□□ -0.03
ERC1-208	ENST00000538971	PLPPR3	Q6T4P5	718 aa		14.52	□□□□□ -0.08
ERC1-208	ENST00000538971	KCNA4	P22459	653 aa		14.35	□□□□□ -0.11
ERC1-208	ENST00000538971	RTN4	Q9NQC3	1192 aa	Known RBP	14.27	□□□□□ -0.12
ERC1-208	ENST00000538971	CSRNP3	Q8WYN3	585 aa		14.26	□□□□□ -0.13
ERC1-208	ENST00000538971	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.87	□□□□□ -0.19
ERC1-208	ENST00000538971	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.74	□□□□□ -0.21
ERC1-208	ENST00000538971	ADRA2B	P18089	450 aa		13.73	□□□□□ -0.21
ERC1-208	ENST00000538971	NCBP3	Q53F19	620 aa	Known RBP	13.52	□□□□□ -0.25
ERC1-208	ENST00000538971	PRKCSH	P14314	528 aa	Predicted RBP	13.44	□□□□□ -0.26
ERC1-208	ENST00000538971	ZBTB22	O15209	634 aa		13.33	□□□□□ -0.28
ERC1-208	ENST00000538971	DAXX	Q9UER7	740 aa	Predicted RBP	13.2	□□□□□ -0.3
ERC1-208	ENST00000538971	SENP3	Q9H4L4	574 aa	Predicted RBP	13.16	□□□□□ -0.3
ERC1-208	ENST00000538971	CCDC180	Q9P1Z9	1646 aa		13.15	□□□□□ -0.3
ERC1-208	ENST00000538971	PPP6R1	Q9UPN7	881 aa		13.09	□□□□□ -0.31
ERC1-208	ENST00000538971	TAOK2	Q9UL54	1235 aa		12.99	□□□□□ -0.33
ERC1-208	ENST00000538971	TIMELESS	Q9UNS1	1208 aa		12.93	□□□□□ -0.34
ERC1-208	ENST00000538971	NPM3	O75607	178 aa	Known RBP	12.91	□□□□□ -0.34
ERC1-208	ENST00000538971	PPP4R3CP	Q6ZMV5	832 aa		12.86	□□□□□ -0.35
ERC1-208	ENST00000538971	PLCB2	Q00722	1185 aa		12.84	□□□□□ -0.35
ERC1-208	ENST00000538971	BCAN	Q96GW7	911 aa		12.83	□□□□□ -0.35
ERC1-208	ENST00000538971	TPRN	Q4KMQ1	711 aa		12.83	□□□□□ -0.36
ERC1-208	ENST00000538971	ABCC9	O60706	1549 aa		12.82	□□□□□ -0.36
ERC1-208	ENST00000538971	FKBP8	Q14318	412 aa		12.81	□□□□□ -0.36
ERC1-208	ENST00000538971	TULP1	O00294	542 aa	Predicted RBP	12.77	□□□□□ -0.36
ERC1-208	ENST00000538971	HAP1	P54257	671 aa	Predicted RBP	12.77	□□□□□ -0.37
ERC1-208	ENST00000538971	ARX	Q96QS3	562 aa		12.69	□□□□□ -0.38
ERC1-208	ENST00000538971	FOXD4L1	Q9NU39	408 aa		12.55	□□□□□ -0.4
ERC1-208	ENST00000538971	PELP1	Q8IZL8	1130 aa	Known RBP	12.48	□□□□□ -0.41
ERC1-208	ENST00000538971	HRC	P23327	699 aa		12.45	□□□□□ -0.42
ERC1-208	ENST00000538971	DCAF8L2	P0C7V8	631 aa		12.41	□□□□□ -0.42
ERC1-208	ENST00000538971	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.41	□□□□□ -0.42
ERC1-208	ENST00000538971	GTF3C3	Q9Y5Q9	886 aa		12.4	□□□□□ -0.42
ERC1-208	ENST00000538971	HOMEZ	Q8IX15	550 aa		12.39	□□□□□ -0.43
ERC1-208	ENST00000538971	KDM2A	Q9Y2K7	1162 aa		12.36	□□□□□ -0.43
ERC1-208	ENST00000538971	VSIG10	Q8N0Z9	540 aa		12.34	□□□□□ -0.43
ERC1-208	ENST00000538971	FBLN2	P98095	1184 aa		12.32	□□□□□ -0.44
ERC1-208	ENST00000538971	RB1CC1	Q8TDY2	1594 aa		12.32	□□□□□ -0.44
ERC1-208	ENST00000538971	NACAD	O15069	1562 aa		12.31	□□□□□ -0.44
ERC1-208	ENST00000538971	FOXD1	Q16676	465 aa		12.31	□□□□□ -0.44
ERC1-208	ENST00000538971	DCAF1	Q9Y4B6	1507 aa		12.24	□□□□□ -0.45
ERC1-208	ENST00000538971	MYO15B	Q96JP2	1530 aa		12.23	□□□□□ -0.45
ERC1-208	ENST00000538971	PODXL2	Q9NZ53	605 aa		12.17	□□□□□ -0.46
ERC1-208	ENST00000538971	RANGAP1	P46060	587 aa	Predicted RBP	12.17	□□□□□ -0.46
ERC1-208	ENST00000538971	UNC13A	Q9UPW8	1703 aa		12.15	□□□□□ -0.47
ERC1-208	ENST00000538971	MYT1	Q01538	1121 aa		12.14	□□□□□ -0.47
ERC1-208	ENST00000538971	TMEM132A	Q24JP5	1023 aa		12.13	□□□□□ -0.47
ERC1-208	ENST00000538971	SCRIB	Q14160	1630 aa		12.09	□□□□□ -0.47
ERC1-208	ENST00000538971	C14orf37	Q86TY3	774 aa		12.06	□□□□□ -0.48
ERC1-208	ENST00000538971	CNKSR2	Q8WXI2	1034 aa		12.05	□□□□□ -0.48
ERC1-208	ENST00000538971	KLHL34	Q8N239	644 aa		12.04	□□□□□ -0.48
ERC1-208	ENST00000538971	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12	□□□□□ -0.49
ERC1-208	ENST00000538971	BICRA	Q9NZM4	1560 aa		11.99	□□□□□ -0.49
ERC1-208	ENST00000538971	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.94	□□□□□ -0.5
ERC1-208	ENST00000538971	CFAP44	Q96MT7	982 aa		11.94	□□□□□ -0.5
ERC1-208	ENST00000538971	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.93	□□□□□ -0.5
ERC1-208	ENST00000538971	PCGF6	Q9BYE7	350 aa		11.93	□□□□□ -0.5
ERC1-208	ENST00000538971	SUPT5H	O00267	1087 aa	Known RBP	11.93	□□□□□ -0.5
ERC1-208	ENST00000538971	PPARGC1B	Q86YN6	1023 aa	Known RBP	11.91	□□□□□ -0.5
ERC1-208	ENST00000538971	ERICH6	Q7L0X2	663 aa		11.91	□□□□□ -0.5
ERC1-208	ENST00000538971	SHROOM4	Q9ULL8	1493 aa		11.91	□□□□□ -0.5
ERC1-208	ENST00000538971	TSHZ2	Q9NRE2	1034 aa		11.86	□□□□□ -0.51
ERC1-208	ENST00000538971	PKD2	Q13563	968 aa		11.85	□□□□□ -0.51
ERC1-208	ENST00000538971	NPM1	P06748	294 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
ERC1-208	ENST00000538971	SLC4A2	P04920	1241 aa		11.81	□□□□□ -0.52
ERC1-208	ENST00000538971	ZEB1	P37275	1124 aa	Predicted RBP	11.8	□□□□□ -0.52
ERC1-208	ENST00000538971	NPM2	Q86SE8	214 aa	Known RBP	11.8	□□□□□ -0.52
ERC1-208	ENST00000538971	NBR1	Q14596	966 aa		11.79	□□□□□ -0.52
ERC1-208	ENST00000538971	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.79	□□□□□ -0.52
ERC1-208	ENST00000538971	APLP2	Q06481	763 aa		11.77	□□□□□ -0.52
ERC1-208	ENST00000538971	TRIM26	Q12899	539 aa	Predicted RBP	11.77	□□□□□ -0.52
ERC1-208	ENST00000538971	DNAJC5B	Q9UF47	199 aa		11.76	□□□□□ -0.53
ERC1-208	ENST00000538971	SCAF1	Q9H7N4	1312 aa	Known RBP	11.76	□□□□□ -0.53
ERC1-208	ENST00000538971	ATXN8OS	P0DMR3	200 aa		11.75	□□□□□ -0.53
ERC1-208	ENST00000538971	UBTF	P17480	764 aa	Known RBP	11.75	□□□□□ -0.53
ERC1-208	ENST00000538971	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.72	□□□□□ -0.53
ERC1-208	ENST00000538971	BBX	Q8WY36	941 aa	Predicted RBP	11.72	□□□□□ -0.53
ERC1-208	ENST00000538971	EIF4G1	Q04637	1599 aa	Known RBP	11.66	□□□□□ -0.54
ERC1-208	ENST00000538971	VASP	P50552	380 aa	Predicted RBP	11.65	□□□□□ -0.54
ERC1-208	ENST00000538971	MYCN	P04198	464 aa	Predicted RBP	11.62	□□□□□ -0.55
ERC1-208	ENST00000538971	CECR2	Q9BXF3	1484 aa		11.61	□□□□□ -0.55
ERC1-208	ENST00000538971	FBXO3	Q9UK99	471 aa		11.61	□□□□□ -0.55
ERC1-208	ENST00000538971	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.6	□□□□□ -0.55
ERC1-208	ENST00000538971	CC2D2A	Q9P2K1	1620 aa		11.59	□□□□□ -0.55
ERC1-208	ENST00000538971	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.57	□□□□□ -0.56
ERC1-208	ENST00000538971	SPRYD3	Q8NCJ5	442 aa		11.57	□□□□□ -0.56
ERC1-208	ENST00000538971	SMARCA4	P51532	1647 aa		11.53	□□□□□ -0.56
ERC1-208	ENST00000538971	ACIN1	Q9UKV3	1341 aa	Known RBP	11.52	□□□□□ -0.57
ERC1-208	ENST00000538971	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.5	□□□□□ -0.57
ERC1-208	ENST00000538971	TTBK1	Q5TCY1	1321 aa	Predicted RBP	11.49	□□□□□ -0.57
ERC1-208	ENST00000538971	MROH2B	Q7Z745	1585 aa		11.49	□□□□□ -0.57
ERC1-208	ENST00000538971	TRH	P20396	242 aa	Predicted RBP	11.46	□□□□□ -0.57
ERC1-208	ENST00000538971	DNAJC5	Q9H3Z4	198 aa		11.46	□□□□□ -0.57
ERC1-208	ENST00000538971	RNF216	Q9NWF9	866 aa	Predicted RBP	11.46	□□□□□ -0.57
ERC1-208	ENST00000538971	ECM2	O94769	699 aa	Predicted RBP	11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms