RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 GRIN2AQ12879 1464 aa22.43■■□□□ 1.18
CDCA3-207ENST00000538862 FHAD1B1AJZ9 1412 aa22.42■■□□□ 1.18
CDCA3-207ENST00000538862 KIF27Q86VH2 1401 aa22.4■■□□□ 1.18
CDCA3-207ENST00000538862 RUSC2Q8N2Y8 1516 aa22.38■■□□□ 1.17
CDCA3-207ENST00000538862 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
CDCA3-207ENST00000538862 CEP170Q5SW79 1584 aa22.36■■□□□ 1.17
CDCA3-207ENST00000538862 GOLGA3Q08378 1498 aa22.36■■□□□ 1.17
CDCA3-207ENST00000538862 IGF1RP08069 1367 aa22.34■■□□□ 1.17
CDCA3-207ENST00000538862 NUP160Q12769 1436 aa22.32■■□□□ 1.16
CDCA3-207ENST00000538862 CYB5RLQ6IPT4 315 aa22.29■■□□□ 1.16
CDCA3-207ENST00000538862 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
CDCA3-207ENST00000538862 UBTFP17480 764 aaKnown RBP22.28■■□□□ 1.16
CDCA3-207ENST00000538862 CUL7Q14999 1698 aa22.27■■□□□ 1.16
CDCA3-207ENST00000538862 KIF21BO75037 1637 aa22.25■■□□□ 1.15
CDCA3-207ENST00000538862 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
CDCA3-207ENST00000538862 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
CDCA3-207ENST00000538862 CCER1Q8TC90 406 aaPredicted RBP22.2■■□□□ 1.14
CDCA3-207ENST00000538862 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.19■■□□□ 1.14
CDCA3-207ENST00000538862 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
CDCA3-207ENST00000538862 JPH4Q96JJ6 628 aa22.11■■□□□ 1.13
CDCA3-207ENST00000538862 PRG4Q92954 1404 aaPredicted RBP22.09■■□□□ 1.13
CDCA3-207ENST00000538862 KIAA0586Q9BVV6 1533 aa22.08■■□□□ 1.12
CDCA3-207ENST00000538862 RAPGEF2Q9Y4G8 1499 aa22.06■■□□□ 1.12
CDCA3-207ENST00000538862 CLIP1P30622 1438 aa22.05■■□□□ 1.12
CDCA3-207ENST00000538862 MYT1Q01538 1121 aa22.03■■□□□ 1.12
CDCA3-207ENST00000538862 TTBK1Q5TCY1 1321 aaPredicted RBP22.02■■□□□ 1.12
CDCA3-207ENST00000538862 VPS8Q8N3P4 1428 aa21.99■■□□□ 1.11
CDCA3-207ENST00000538862 IQGAP2Q13576 1575 aa21.97■■□□□ 1.11
CDCA3-207ENST00000538862 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
CDCA3-207ENST00000538862 CTTNBP2Q8WZ74 1663 aa21.89■■□□□ 1.09
CDCA3-207ENST00000538862 TRHP20396 242 aaPredicted RBP21.88■■□□□ 1.09
CDCA3-207ENST00000538862 APLP2Q06481 763 aa21.84■■□□□ 1.09
CDCA3-207ENST00000538862 DISP1Q96F81 1524 aa21.83■■□□□ 1.09
CDCA3-207ENST00000538862 CARMIL2Q6F5E8 1435 aa21.83■■□□□ 1.09
CDCA3-207ENST00000538862 UGGT2Q9NYU1 1516 aa21.82■■□□□ 1.08
CDCA3-207ENST00000538862 PTPRGP23470 1445 aa21.8■■□□□ 1.08
CDCA3-207ENST00000538862 ADCY10Q96PN6 1610 aa21.79■■□□□ 1.08
CDCA3-207ENST00000538862 DIEXFQ68CQ4 756 aaKnown RBP21.78■■□□□ 1.08
CDCA3-207ENST00000538862 KIAA0556O60303 1618 aa21.77■■□□□ 1.08
CDCA3-207ENST00000538862 HNRNPUL2Q1KMD3 747 aaKnown RBP21.71■■□□□ 1.07
CDCA3-207ENST00000538862 SCAF1Q9H7N4 1312 aaKnown RBP21.69■■□□□ 1.06
CDCA3-207ENST00000538862 NPM1P06748 294 aaKnown RBP eCLIP21.68■■□□□ 1.06
CDCA3-207ENST00000538862 RANGAP1P46060 587 aaPredicted RBP21.68■■□□□ 1.06
CDCA3-207ENST00000538862 ZNF316A6NFI3 1004 aaPredicted RBP21.67■■□□□ 1.06
CDCA3-207ENST00000538862 P3H3Q8IVL6 736 aa21.66■■□□□ 1.06
CDCA3-207ENST00000538862 UACAQ9BZF9 1416 aa21.64■■□□□ 1.06
CDCA3-207ENST00000538862 KIF13AQ9H1H9 1805 aa21.62■■□□□ 1.05
CDCA3-207ENST00000538862 MAPKBP1O60336 1514 aa21.61■■□□□ 1.05
CDCA3-207ENST00000538862 ABCC2Q92887 1545 aa21.61■■□□□ 1.05
CDCA3-207ENST00000538862 PLB1Q6P1J6 1458 aa21.6■■□□□ 1.05
CDCA3-207ENST00000538862 ACIN1Q9UKV3 1341 aaKnown RBP21.59■■□□□ 1.05
CDCA3-207ENST00000538862 UHRF1BP1LA0JNW5 1464 aa21.59■■□□□ 1.05
CDCA3-207ENST00000538862 SAMD9Q5K651 1589 aa21.58■■□□□ 1.05
CDCA3-207ENST00000538862 CLSPNQ9HAW4 1339 aa21.54■■□□□ 1.04
CDCA3-207ENST00000538862 DIP2BQ9P265 1576 aa21.53■■□□□ 1.04
CDCA3-207ENST00000538862 ABCC10Q5T3U5 1492 aa21.53■■□□□ 1.04
CDCA3-207ENST00000538862 FAM69CQ0P6D2 419 aa21.53■■□□□ 1.04
CDCA3-207ENST00000538862 ARHGAP35Q9NRY4 1499 aa21.53■■□□□ 1.04
CDCA3-207ENST00000538862 CENPBP07199 599 aaPredicted RBP21.53■■□□□ 1.04
CDCA3-207ENST00000538862 ZCCHC11Q5TAX3 1644 aaKnown RBP21.53■■□□□ 1.04
CDCA3-207ENST00000538862 ABCA8O94911 1581 aa21.52■■□□□ 1.04
CDCA3-207ENST00000538862 KDM5BQ9UGL1 1544 aa21.51■■□□□ 1.03
CDCA3-207ENST00000538862 FHOD3Q2V2M9 1422 aa21.51■■□□□ 1.03
CDCA3-207ENST00000538862 ASXL2Q76L83 1435 aa21.51■■□□□ 1.03
CDCA3-207ENST00000538862 RRBP1Q9P2E9 1410 aaKnown RBP21.51■■□□□ 1.03
CDCA3-207ENST00000538862 KANK4Q5T7N3 995 aaPredicted RBP21.49■■□□□ 1.03
CDCA3-207ENST00000538862 NEUROD1Q13562 356 aa21.49■■□□□ 1.03
CDCA3-207ENST00000538862 ARID3CA6NKF2 412 aa21.48■■□□□ 1.03
CDCA3-207ENST00000538862 TSPOAP1O95153 1857 aa21.45■■□□□ 1.02
CDCA3-207ENST00000538862 EFCAB5A4FU69 1503 aa21.43■■□□□ 1.02
CDCA3-207ENST00000538862 DHX57Q6P158 1386 aaKnown RBP21.42■■□□□ 1.02
CDCA3-207ENST00000538862 MAP3K1Q13233 1512 aa21.41■■□□□ 1.02
CDCA3-207ENST00000538862 RAPGEF6Q8TEU7 1601 aa21.41■■□□□ 1.02
CDCA3-207ENST00000538862 EPRSP07814 1512 aaKnown RBP21.37■■□□□ 1.01
CDCA3-207ENST00000538862 CCNB3Q8WWL7 1395 aa21.37■■□□□ 1.01
CDCA3-207ENST00000538862 WDR7Q9Y4E6 1490 aa21.36■■□□□ 1.01
CDCA3-207ENST00000538862 ATP10BO94823 1461 aa21.36■■□□□ 1.01
CDCA3-207ENST00000538862 GLI2P10070 1586 aa21.34■■□□□ 1.01
CDCA3-207ENST00000538862 NUP153P49790 1475 aaKnown RBP21.33■■□□□ 1.01
CDCA3-207ENST00000538862 KCNH8Q96L42 1107 aa21.33■■□□□ 1
CDCA3-207ENST00000538862 TIAM1Q13009 1591 aa21.32■■□□□ 1
CDCA3-207ENST00000538862 PPRC1Q5VV67 1664 aaKnown RBP21.3■■□□□ 1
CDCA3-207ENST00000538862 MAP3K4Q9Y6R4 1608 aa21.28■■□□□ 1
CDCA3-207ENST00000538862 MIER1Q8N108 512 aa21.27■■□□□ 1
CDCA3-207ENST00000538862 GTF3C3Q9Y5Q9 886 aa21.27■■□□□ 1
CDCA3-207ENST00000538862 ATP1B4Q9UN42 357 aaPredicted RBP21.24■□□□□ 0.99
CDCA3-207ENST00000538862 LRRC9Q6ZRR7 1453 aa21.24■□□□□ 0.99
CDCA3-207ENST00000538862 FMN1Q68DA7 1419 aa21.23■□□□□ 0.99
CDCA3-207ENST00000538862 CDK13Q14004 1512 aaKnown RBP21.22■□□□□ 0.99
CDCA3-207ENST00000538862 KDM6BO15054 1643 aa21.21■□□□□ 0.99
CDCA3-207ENST00000538862 CFAP43Q8NDM7 1665 aa21.2■□□□□ 0.98
CDCA3-207ENST00000538862 CD109Q6YHK3 1445 aa21.18■□□□□ 0.98
CDCA3-207ENST00000538862 HECW1Q76N89 1606 aa21.18■□□□□ 0.98
CDCA3-207ENST00000538862 LRRIQ1Q96JM4 1722 aa21.15■□□□□ 0.98
CDCA3-207ENST00000538862 TEX14Q8IWB6 1497 aa21.14■□□□□ 0.98
CDCA3-207ENST00000538862 PLEKHD1A6NEE1 506 aa21.14■□□□□ 0.98
CDCA3-207ENST00000538862 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.97
CDCA3-207ENST00000538862 ABCA9Q8IUA7 1624 aa21.13■□□□□ 0.97
CDCA3-207ENST00000538862 RAB3GAP2Q9H2M9 1393 aa21.13■□□□□ 0.97
CDCA3-207ENST00000538862 COL17A1Q9UMD9 1497 aaPredicted RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms