RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 PBRM1Q86U86 1689 aa16.28■□□□□ 0.2
LDHA-216ENST00000538451 CARMIL1Q5VZK9 1371 aa16.28■□□□□ 0.2
LDHA-216ENST00000538451 SYNJ2O15056 1496 aa16.27■□□□□ 0.2
LDHA-216ENST00000538451 GOLGA3Q08378 1498 aa16.27■□□□□ 0.2
LDHA-216ENST00000538451 UBTFP17480 764 aaKnown RBP16.25■□□□□ 0.19
LDHA-216ENST00000538451 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
LDHA-216ENST00000538451 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
LDHA-216ENST00000538451 LOC105371045A0A1W2PR82 267 aa16.22■□□□□ 0.19
LDHA-216ENST00000538451 FHAD1B1AJZ9 1412 aa16.2■□□□□ 0.18
LDHA-216ENST00000538451 ARHGEF11O15085 1522 aa16.2■□□□□ 0.18
LDHA-216ENST00000538451 RIMBP3CA6NJZ7 1639 aa16.2■□□□□ 0.18
LDHA-216ENST00000538451 RIMBP3BA6NNM3 1639 aa16.2■□□□□ 0.18
LDHA-216ENST00000538451 RIMBP3Q9UFD9 1639 aa16.2■□□□□ 0.18
LDHA-216ENST00000538451 TNIKQ9UKE5 1360 aa16.17■□□□□ 0.18
LDHA-216ENST00000538451 CLASP1Q7Z460 1538 aa16.15■□□□□ 0.18
LDHA-216ENST00000538451 ADAMTS12P58397 1594 aa16.15■□□□□ 0.18
LDHA-216ENST00000538451 GRIN2AQ12879 1464 aa16.14■□□□□ 0.17
LDHA-216ENST00000538451 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
LDHA-216ENST00000538451 NUP160Q12769 1436 aa16.07■□□□□ 0.16
LDHA-216ENST00000538451 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
LDHA-216ENST00000538451 CEP170Q5SW79 1584 aa16.03■□□□□ 0.16
LDHA-216ENST00000538451 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
LDHA-216ENST00000538451 CTTNBP2Q8WZ74 1663 aa16■□□□□ 0.15
LDHA-216ENST00000538451 CLIP1P30622 1438 aa15.99■□□□□ 0.15
LDHA-216ENST00000538451 KIAA0586Q9BVV6 1533 aa15.97■□□□□ 0.15
LDHA-216ENST00000538451 RANGAP1P46060 587 aaPredicted RBP15.95■□□□□ 0.14
LDHA-216ENST00000538451 SHROOM2Q13796 1616 aa15.94■□□□□ 0.14
LDHA-216ENST00000538451 IQGAP2Q13576 1575 aa15.94■□□□□ 0.14
LDHA-216ENST00000538451 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
LDHA-216ENST00000538451 JPH4Q96JJ6 628 aa15.93■□□□□ 0.14
LDHA-216ENST00000538451 SLC4A1APQ9BWU0 796 aaKnown RBP15.92■□□□□ 0.14
LDHA-216ENST00000538451 EFCAB5A4FU69 1503 aa15.91■□□□□ 0.14
LDHA-216ENST00000538451 PRG4Q92954 1404 aaPredicted RBP15.89■□□□□ 0.13
LDHA-216ENST00000538451 ERCC6L2Q5T890 1561 aa15.89■□□□□ 0.13
LDHA-216ENST00000538451 CARMIL2Q6F5E8 1435 aa15.87■□□□□ 0.13
LDHA-216ENST00000538451 UGGT2Q9NYU1 1516 aa15.85■□□□□ 0.13
LDHA-216ENST00000538451 ARHGAP35Q9NRY4 1499 aa15.84■□□□□ 0.13
LDHA-216ENST00000538451 TRHP20396 242 aaPredicted RBP15.83■□□□□ 0.12
LDHA-216ENST00000538451 APLP2Q06481 763 aa15.83■□□□□ 0.12
LDHA-216ENST00000538451 FMN1Q68DA7 1419 aa15.81■□□□□ 0.12
LDHA-216ENST00000538451 VPS8Q8N3P4 1428 aa15.81■□□□□ 0.12
LDHA-216ENST00000538451 SAMD9Q5K651 1589 aa15.8■□□□□ 0.12
LDHA-216ENST00000538451 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
LDHA-216ENST00000538451 FHOD3Q2V2M9 1422 aa15.75■□□□□ 0.11
LDHA-216ENST00000538451 KIAA0556O60303 1618 aa15.74■□□□□ 0.11
LDHA-216ENST00000538451 DISP1Q96F81 1524 aa15.73■□□□□ 0.11
LDHA-216ENST00000538451 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
LDHA-216ENST00000538451 PTPRGP23470 1445 aa15.7■□□□□ 0.1
LDHA-216ENST00000538451 ATP1B4Q9UN42 357 aaPredicted RBP15.69■□□□□ 0.1
LDHA-216ENST00000538451 FYCO1Q9BQS8 1478 aa15.68■□□□□ 0.1
LDHA-216ENST00000538451 CASKIN1Q8WXD9 1431 aa15.67■□□□□ 0.1
LDHA-216ENST00000538451 TTBK1Q5TCY1 1321 aaPredicted RBP15.66■□□□□ 0.1
LDHA-216ENST00000538451 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
LDHA-216ENST00000538451 ADCY10Q96PN6 1610 aa15.64■□□□□ 0.09
LDHA-216ENST00000538451 MAPK8IP2Q13387 824 aaPredicted RBP15.63■□□□□ 0.09
LDHA-216ENST00000538451 HECW1Q76N89 1606 aa15.62■□□□□ 0.09
LDHA-216ENST00000538451 MAP3K1Q13233 1512 aa15.62■□□□□ 0.09
LDHA-216ENST00000538451 CDK11AQ9UQ88 783 aaPredicted RBP15.61■□□□□ 0.09
LDHA-216ENST00000538451 CCDC18Q5T9S5 1454 aa15.6■□□□□ 0.09
LDHA-216ENST00000538451 PCF11O94913 1555 aaKnown RBP15.6■□□□□ 0.09
LDHA-216ENST00000538451 MAPKBP1O60336 1514 aa15.6■□□□□ 0.09
LDHA-216ENST00000538451 DMRT2Q9Y5R5 561 aa15.6■□□□□ 0.09
LDHA-216ENST00000538451 UACAQ9BZF9 1416 aa15.59■□□□□ 0.09
LDHA-216ENST00000538451 UHRF1BP1LA0JNW5 1464 aa15.58■□□□□ 0.08
LDHA-216ENST00000538451 RAPGEF6Q8TEU7 1601 aa15.58■□□□□ 0.08
LDHA-216ENST00000538451 ABCC2Q92887 1545 aa15.57■□□□□ 0.08
LDHA-216ENST00000538451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
LDHA-216ENST00000538451 NPM3O75607 178 aaKnown RBP15.56■□□□□ 0.08
LDHA-216ENST00000538451 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
LDHA-216ENST00000538451 ABCC10Q5T3U5 1492 aa15.55■□□□□ 0.08
LDHA-216ENST00000538451 TIAM1Q13009 1591 aa15.54■□□□□ 0.08
LDHA-216ENST00000538451 FAM69CQ0P6D2 419 aa15.54■□□□□ 0.08
LDHA-216ENST00000538451 PLB1Q6P1J6 1458 aa15.53■□□□□ 0.08
LDHA-216ENST00000538451 ABCA8O94911 1581 aa15.53■□□□□ 0.08
LDHA-216ENST00000538451 EPRSP07814 1512 aaKnown RBP15.52■□□□□ 0.07
LDHA-216ENST00000538451 MTUS2Q5JR59 1369 aa15.52■□□□□ 0.07
LDHA-216ENST00000538451 KIF13AQ9H1H9 1805 aa15.51■□□□□ 0.07
LDHA-216ENST00000538451 DIP2BQ9P265 1576 aa15.5■□□□□ 0.07
LDHA-216ENST00000538451 CFAP43Q8NDM7 1665 aa15.5■□□□□ 0.07
LDHA-216ENST00000538451 KDM5BQ9UGL1 1544 aa15.5■□□□□ 0.07
LDHA-216ENST00000538451 NUP153P49790 1475 aaKnown RBP15.49■□□□□ 0.07
LDHA-216ENST00000538451 PLEKHD1A6NEE1 506 aa15.48■□□□□ 0.07
LDHA-216ENST00000538451 ASXL2Q76L83 1435 aa15.48■□□□□ 0.07
LDHA-216ENST00000538451 LRRC9Q6ZRR7 1453 aa15.48■□□□□ 0.07
LDHA-216ENST00000538451 PPARGC1BQ86YN6 1023 aaKnown RBP15.47■□□□□ 0.07
LDHA-216ENST00000538451 TRIM26Q12899 539 aaPredicted RBP15.45■□□□□ 0.06
LDHA-216ENST00000538451 EHBP1L1Q8N3D4 1523 aa15.45■□□□□ 0.06
LDHA-216ENST00000538451 ARID3CA6NKF2 412 aa15.44■□□□□ 0.06
LDHA-216ENST00000538451 KANK4Q5T7N3 995 aaPredicted RBP15.44■□□□□ 0.06
LDHA-216ENST00000538451 ZCCHC11Q5TAX3 1644 aaKnown RBP15.44■□□□□ 0.06
LDHA-216ENST00000538451 CDK13Q14004 1512 aaKnown RBP15.42■□□□□ 0.06
LDHA-216ENST00000538451 ATP10BO94823 1461 aa15.42■□□□□ 0.06
LDHA-216ENST00000538451 GLI2P10070 1586 aa15.41■□□□□ 0.06
LDHA-216ENST00000538451 TROQ12816 1431 aaPredicted RBP15.39■□□□□ 0.05
LDHA-216ENST00000538451 SUPT6HQ7KZ85 1726 aaKnown RBP15.39■□□□□ 0.05
LDHA-216ENST00000538451 LRRIQ1Q96JM4 1722 aa15.39■□□□□ 0.05
LDHA-216ENST00000538451 WDR7Q9Y4E6 1490 aa15.39■□□□□ 0.05
LDHA-216ENST00000538451 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
LDHA-216ENST00000538451 ZBTB22O15209 634 aa15.36■□□□□ 0.05
LDHA-216ENST00000538451 TSPOAP1O95153 1857 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms