RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
TRIM25-202ENST00000537230 ITGAEP38570 1179 aa19.1■□□□□ 0.65
TRIM25-202ENST00000537230 CCNB3Q8WWL7 1395 aa19.09■□□□□ 0.65
TRIM25-202ENST00000537230 DHX57Q6P158 1386 aaKnown RBP19.09■□□□□ 0.65
TRIM25-202ENST00000537230 TDRD9Q8NDG6 1382 aaKnown RBP19.08■□□□□ 0.64
TRIM25-202ENST00000537230 FHOD3Q2V2M9 1422 aa19.07■□□□□ 0.64
TRIM25-202ENST00000537230 WDR97A6NE52 1622 aa19.06■□□□□ 0.64
TRIM25-202ENST00000537230 PCF11O94913 1555 aaKnown RBP19.06■□□□□ 0.64
TRIM25-202ENST00000537230 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
TRIM25-202ENST00000537230 ATP1B4Q9UN42 357 aaPredicted RBP19.04■□□□□ 0.64
TRIM25-202ENST00000537230 CUL7Q14999 1698 aa19.04■□□□□ 0.64
TRIM25-202ENST00000537230 LRRC9Q6ZRR7 1453 aa19.03■□□□□ 0.64
TRIM25-202ENST00000537230 MAP3K1Q13233 1512 aa19.02■□□□□ 0.63
TRIM25-202ENST00000537230 PHLDB1Q86UU1 1377 aa19.01■□□□□ 0.63
TRIM25-202ENST00000537230 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
TRIM25-202ENST00000537230 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
TRIM25-202ENST00000537230 CTTNBP2Q8WZ74 1663 aa19■□□□□ 0.63
TRIM25-202ENST00000537230 ABCA5Q8WWZ7 1642 aa18.99■□□□□ 0.63
TRIM25-202ENST00000537230 GAPVD1Q14C86 1478 aa18.97■□□□□ 0.63
TRIM25-202ENST00000537230 CFAP43Q8NDM7 1665 aa18.97■□□□□ 0.63
TRIM25-202ENST00000537230 YTHDC1Q96MU7 727 aaKnown RBP18.95■□□□□ 0.62
TRIM25-202ENST00000537230 EFCAB5A4FU69 1503 aa18.94■□□□□ 0.62
TRIM25-202ENST00000537230 CLSPNQ9HAW4 1339 aa18.93■□□□□ 0.62
TRIM25-202ENST00000537230 RAB3GAP2Q9H2M9 1393 aa18.91■□□□□ 0.62
TRIM25-202ENST00000537230 FAM50AQ14320 339 aaKnown RBP18.91■□□□□ 0.62
TRIM25-202ENST00000537230 FYCO1Q9BQS8 1478 aa18.91■□□□□ 0.62
TRIM25-202ENST00000537230 CASKIN1Q8WXD9 1431 aa18.9■□□□□ 0.62
TRIM25-202ENST00000537230 TARBP1Q13395 1621 aaKnown RBP18.9■□□□□ 0.62
TRIM25-202ENST00000537230 MIER1Q8N108 512 aa18.87■□□□□ 0.61
TRIM25-202ENST00000537230 SNAPC4Q5SXM2 1469 aa18.86■□□□□ 0.61
TRIM25-202ENST00000537230 AQRO60306 1485 aaKnown RBP eCLIP18.85■□□□□ 0.616e-7■■■■□ 21.9
TRIM25-202ENST00000537230 SAMD9Q5K651 1589 aa18.84■□□□□ 0.61
TRIM25-202ENST00000537230 FMN1Q68DA7 1419 aa18.83■□□□□ 0.61
TRIM25-202ENST00000537230 LRRIQ1Q96JM4 1722 aa18.83■□□□□ 0.61
TRIM25-202ENST00000537230 MAPKBP1O60336 1514 aa18.82■□□□□ 0.6
TRIM25-202ENST00000537230 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
TRIM25-202ENST00000537230 PBRM1Q86U86 1689 aa18.78■□□□□ 0.6
TRIM25-202ENST00000537230 MRC2Q9UBG0 1479 aa18.75■□□□□ 0.59
TRIM25-202ENST00000537230 MTUS2Q5JR59 1369 aa18.75■□□□□ 0.59
TRIM25-202ENST00000537230 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
TRIM25-202ENST00000537230 FGD6Q6ZV73 1430 aa18.73■□□□□ 0.59
TRIM25-202ENST00000537230 ZNF608Q9ULD9 1512 aaPredicted RBP18.72■□□□□ 0.59
TRIM25-202ENST00000537230 SIN3AQ96ST3 1273 aa18.71■□□□□ 0.59
TRIM25-202ENST00000537230 ADAMTS12P58397 1594 aa18.7■□□□□ 0.58
TRIM25-202ENST00000537230 PTPRKQ15262 1439 aa18.68■□□□□ 0.58
TRIM25-202ENST00000537230 NCOA2Q15596 1464 aa18.68■□□□□ 0.58
TRIM25-202ENST00000537230 MAGI3Q5TCQ9 1506 aa18.67■□□□□ 0.58
TRIM25-202ENST00000537230 IQGAP2Q13576 1575 aa18.66■□□□□ 0.58
TRIM25-202ENST00000537230 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.66■□□□□ 0.58
TRIM25-202ENST00000537230 ARID3CA6NKF2 412 aa18.64■□□□□ 0.58
TRIM25-202ENST00000537230 THOC2Q8NI27 1593 aaKnown RBP18.62■□□□□ 0.57
TRIM25-202ENST00000537230 MYOM3Q5VTT5 1437 aa18.62■□□□□ 0.57
TRIM25-202ENST00000537230 SUPT6HQ7KZ85 1726 aaKnown RBP18.61■□□□□ 0.57
TRIM25-202ENST00000537230 WDR62O43379 1518 aa18.61■□□□□ 0.57
TRIM25-202ENST00000537230 EHBP1L1Q8N3D4 1523 aa18.6■□□□□ 0.57
TRIM25-202ENST00000537230 IFT140Q96RY7 1462 aa18.59■□□□□ 0.57
TRIM25-202ENST00000537230 CDK13Q14004 1512 aaKnown RBP18.58■□□□□ 0.57
TRIM25-202ENST00000537230 UGGT2Q9NYU1 1516 aa18.58■□□□□ 0.56
TRIM25-202ENST00000537230 CCDC18Q5T9S5 1454 aa18.56■□□□□ 0.56
TRIM25-202ENST00000537230 ARHGEF11O15085 1522 aa18.56■□□□□ 0.56
TRIM25-202ENST00000537230 EPRSP07814 1512 aaKnown RBP18.56■□□□□ 0.56
TRIM25-202ENST00000537230 HECW1Q76N89 1606 aa18.55■□□□□ 0.56
TRIM25-202ENST00000537230 HFM1A2PYH4 1435 aa18.55■□□□□ 0.56
TRIM25-202ENST00000537230 PTPN23Q9H3S7 1636 aa18.55■□□□□ 0.56
TRIM25-202ENST00000537230 EIF4G3O43432 1585 aaKnown RBP18.54■□□□□ 0.56
TRIM25-202ENST00000537230 NAIPQ13075 1403 aa18.53■□□□□ 0.56
TRIM25-202ENST00000537230 CHIC2Q9UKJ5 165 aa18.51■□□□□ 0.55
TRIM25-202ENST00000537230 ERCC6Q03468 1493 aa18.51■□□□□ 0.55
TRIM25-202ENST00000537230 DISP1Q96F81 1524 aa18.5■□□□□ 0.55
TRIM25-202ENST00000537230 RRP7BPQ9NSQ0 103 aa18.49■□□□□ 0.55
TRIM25-202ENST00000537230 GRIN2AQ12879 1464 aa18.49■□□□□ 0.55
TRIM25-202ENST00000537230 KIAA0586Q9BVV6 1533 aa18.48■□□□□ 0.55
TRIM25-202ENST00000537230 HIRIP3Q9BW71 556 aaPredicted RBP18.48■□□□□ 0.55
TRIM25-202ENST00000537230 UACAQ9BZF9 1416 aa18.47■□□□□ 0.55
TRIM25-202ENST00000537230 KIAA0556O60303 1618 aa18.47■□□□□ 0.55
TRIM25-202ENST00000537230 PPP1R15AO75807 674 aaPredicted RBP18.46■□□□□ 0.55
TRIM25-202ENST00000537230 TCOF1Q13428 1488 aaKnown RBP18.44■□□□□ 0.54
TRIM25-202ENST00000537230 KDM6BO15054 1643 aa18.42■□□□□ 0.54
TRIM25-202ENST00000537230 NUP153P49790 1475 aaKnown RBP18.42■□□□□ 0.54
TRIM25-202ENST00000537230 FBLN2P98095 1184 aa18.42■□□□□ 0.54
TRIM25-202ENST00000537230 TIMELESSQ9UNS1 1208 aa18.42■□□□□ 0.54
TRIM25-202ENST00000537230 KCNH8Q96L42 1107 aa18.41■□□□□ 0.54
TRIM25-202ENST00000537230 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
TRIM25-202ENST00000537230 CEP170Q5SW79 1584 aa18.4■□□□□ 0.54
TRIM25-202ENST00000537230 CHMP7Q8WUX9 453 aaPredicted RBP18.39■□□□□ 0.54
TRIM25-202ENST00000537230 TONSLQ96HA7 1378 aa18.38■□□□□ 0.53
TRIM25-202ENST00000537230 DENND4BO75064 1496 aaPredicted RBP18.38■□□□□ 0.53
TRIM25-202ENST00000537230 ZNF644Q9H582 1327 aaPredicted RBP18.38■□□□□ 0.53
TRIM25-202ENST00000537230 RAPGEF6Q8TEU7 1601 aa18.37■□□□□ 0.53
TRIM25-202ENST00000537230 SUPT16HQ9Y5B9 1047 aaKnown RBP18.36■□□□□ 0.53
TRIM25-202ENST00000537230 GCC2Q8IWJ2 1684 aa18.36■□□□□ 0.53
TRIM25-202ENST00000537230 MIA2Q96PC5 1412 aa18.36■□□□□ 0.53
TRIM25-202ENST00000537230 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
TRIM25-202ENST00000537230 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
TRIM25-202ENST00000537230 PLB1Q6P1J6 1458 aa18.34■□□□□ 0.53
TRIM25-202ENST00000537230 TRIM52Q96A61 297 aa18.33■□□□□ 0.53
TRIM25-202ENST00000537230 KDM5BQ9UGL1 1544 aa18.32■□□□□ 0.52
TRIM25-202ENST00000537230 PRG4Q92954 1404 aaPredicted RBP18.32■□□□□ 0.52
TRIM25-202ENST00000537230 FOXD1Q16676 465 aa18.3■□□□□ 0.52
TRIM25-202ENST00000537230 DAPK1P53355 1430 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms