RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 NISCHQ9Y2I1 1504 aa27.29■■□□□ 1.96
TRIM25-202ENST00000537230 CCDC180Q9P1Z9 1646 aa23.27■■□□□ 1.32
TRIM25-202ENST00000537230 SHROOM4Q9ULL8 1493 aa23.18■■□□□ 1.3
TRIM25-202ENST00000537230 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
TRIM25-202ENST00000537230 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
TRIM25-202ENST00000537230 SUPT5HO00267 1087 aaKnown RBP22.6■■□□□ 1.21
TRIM25-202ENST00000537230 DCAF1Q9Y4B6 1507 aa22.35■■□□□ 1.17
TRIM25-202ENST00000537230 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
TRIM25-202ENST00000537230 SCRIBQ14160 1630 aa21.84■■□□□ 1.09
TRIM25-202ENST00000537230 ABCC9O60706 1549 aa21.8■■□□□ 1.08
TRIM25-202ENST00000537230 MYO15BQ96JP2 1530 aa21.78■■□□□ 1.08
TRIM25-202ENST00000537230 NACADO15069 1562 aa21.56■■□□□ 1.04
TRIM25-202ENST00000537230 RSF1Q96T23 1441 aaPredicted RBP21.54■■□□□ 1.04
TRIM25-202ENST00000537230 CECR2Q9BXF3 1484 aa21.36■■□□□ 1.01
TRIM25-202ENST00000537230 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
TRIM25-202ENST00000537230 MROH2BQ7Z745 1585 aa21.25■□□□□ 0.99
TRIM25-202ENST00000537230 LOC105371045A0A1W2PR82 267 aa21.25■□□□□ 0.99
TRIM25-202ENST00000537230 WIZO95785 1651 aa21.13■□□□□ 0.97
TRIM25-202ENST00000537230 HRCP23327 699 aa21.08■□□□□ 0.97
TRIM25-202ENST00000537230 UNC13AQ9UPW8 1703 aa21.05■□□□□ 0.96
TRIM25-202ENST00000537230 TRIM41Q8WV44 630 aa21.02■□□□□ 0.96
TRIM25-202ENST00000537230 PCGF6Q9BYE7 350 aa20.97■□□□□ 0.95
TRIM25-202ENST00000537230 BAZ1AQ9NRL2 1556 aaPredicted RBP20.95■□□□□ 0.94
TRIM25-202ENST00000537230 FAM9AQ8IZU1 332 aaPredicted RBP20.9■□□□□ 0.94
TRIM25-202ENST00000537230 SMARCA4P51532 1647 aa20.84■□□□□ 0.93
TRIM25-202ENST00000537230 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
TRIM25-202ENST00000537230 BICRAQ9NZM4 1560 aa20.77■□□□□ 0.91
TRIM25-202ENST00000537230 EHMT2Q96KQ7 1210 aa20.77■□□□□ 0.91
TRIM25-202ENST00000537230 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
TRIM25-202ENST00000537230 TOP2AP11388 1531 aaKnown RBP20.74■□□□□ 0.91
TRIM25-202ENST00000537230 PPARGC1BQ86YN6 1023 aaKnown RBP20.72■□□□□ 0.91
TRIM25-202ENST00000537230 CCDC88BA6NC98 1476 aa20.67■□□□□ 0.9
TRIM25-202ENST00000537230 SMARCA2P51531 1590 aa20.65■□□□□ 0.9
TRIM25-202ENST00000537230 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
TRIM25-202ENST00000537230 TRIM26Q12899 539 aaPredicted RBP20.55■□□□□ 0.88
TRIM25-202ENST00000537230 PEG3Q9GZU2 1588 aa20.43■□□□□ 0.86
TRIM25-202ENST00000537230 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
TRIM25-202ENST00000537230 SOGA1O94964 1423 aa20.34■□□□□ 0.85
TRIM25-202ENST00000537230 RUSC2Q8N2Y8 1516 aa20.28■□□□□ 0.84
TRIM25-202ENST00000537230 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
TRIM25-202ENST00000537230 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.831e-7■■■■■ 66.8
TRIM25-202ENST00000537230 SYNJ1O43426 1573 aa20.17■□□□□ 0.82
TRIM25-202ENST00000537230 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
TRIM25-202ENST00000537230 CEP162Q5TB80 1403 aa20.11■□□□□ 0.81
TRIM25-202ENST00000537230 EEA1Q15075 1411 aa20.08■□□□□ 0.81
TRIM25-202ENST00000537230 TNIKQ9UKE5 1360 aa20.06■□□□□ 0.8
TRIM25-202ENST00000537230 UBTFP17480 764 aaKnown RBP20.06■□□□□ 0.8
TRIM25-202ENST00000537230 TTBK1Q5TCY1 1321 aaPredicted RBP20.03■□□□□ 0.8
TRIM25-202ENST00000537230 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
TRIM25-202ENST00000537230 ZEB1P37275 1124 aaPredicted RBP19.98■□□□□ 0.79
TRIM25-202ENST00000537230 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
TRIM25-202ENST00000537230 HMGXB3Q12766 1538 aa19.94■□□□□ 0.78
TRIM25-202ENST00000537230 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
TRIM25-202ENST00000537230 CEP164Q9UPV0 1460 aa19.89■□□□□ 0.78
TRIM25-202ENST00000537230 KIF21BO75037 1637 aa19.88■□□□□ 0.77
TRIM25-202ENST00000537230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.86■□□□□ 0.77
TRIM25-202ENST00000537230 RAPGEF2Q9Y4G8 1499 aa19.85■□□□□ 0.77
TRIM25-202ENST00000537230 BIVM-ERCC5R4GMW8 1640 aa19.83■□□□□ 0.76
TRIM25-202ENST00000537230 PELP1Q8IZL8 1130 aaKnown RBP19.79■□□□□ 0.76
TRIM25-202ENST00000537230 CUX1P39880 1505 aa19.79■□□□□ 0.76
TRIM25-202ENST00000537230 RANGAP1P46060 587 aaPredicted RBP19.78■□□□□ 0.76
TRIM25-202ENST00000537230 CLIP1P30622 1438 aa19.77■□□□□ 0.76
TRIM25-202ENST00000537230 CFTRP13569 1480 aa19.77■□□□□ 0.75
TRIM25-202ENST00000537230 CCER1Q8TC90 406 aaPredicted RBP19.73■□□□□ 0.75
TRIM25-202ENST00000537230 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
TRIM25-202ENST00000537230 PRXQ9BXM0 1461 aa19.65■□□□□ 0.74
TRIM25-202ENST00000537230 VPS8Q8N3P4 1428 aa19.65■□□□□ 0.74
TRIM25-202ENST00000537230 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
TRIM25-202ENST00000537230 PRDM2Q13029 1718 aa19.6■□□□□ 0.73
TRIM25-202ENST00000537230 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
TRIM25-202ENST00000537230 KIF27Q86VH2 1401 aa19.58■□□□□ 0.73
TRIM25-202ENST00000537230 CADPSQ9ULU8 1353 aa19.58■□□□□ 0.72
TRIM25-202ENST00000537230 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.71
TRIM25-202ENST00000537230 ARAP1Q96P48 1450 aa19.51■□□□□ 0.71
TRIM25-202ENST00000537230 APLP2Q06481 763 aa19.49■□□□□ 0.71
TRIM25-202ENST00000537230 CUX2O14529 1486 aa19.47■□□□□ 0.71
TRIM25-202ENST00000537230 FGD5Q6ZNL6 1462 aa19.45■□□□□ 0.7
TRIM25-202ENST00000537230 IGF1RP08069 1367 aa19.43■□□□□ 0.7
TRIM25-202ENST00000537230 NESP48681 1621 aa19.4■□□□□ 0.7
TRIM25-202ENST00000537230 KANK4Q5T7N3 995 aaPredicted RBP19.4■□□□□ 0.7
TRIM25-202ENST00000537230 FANCD2Q9BXW9 1451 aa19.4■□□□□ 0.7
TRIM25-202ENST00000537230 ARHGAP35Q9NRY4 1499 aa19.38■□□□□ 0.69
TRIM25-202ENST00000537230 NEUROD1Q13562 356 aa19.34■□□□□ 0.69
TRIM25-202ENST00000537230 ACIN1Q9UKV3 1341 aaKnown RBP19.33■□□□□ 0.69
TRIM25-202ENST00000537230 CARMIL1Q5VZK9 1371 aa19.32■□□□□ 0.68
TRIM25-202ENST00000537230 RAD54L2Q9Y4B4 1467 aa19.31■□□□□ 0.68
TRIM25-202ENST00000537230 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
TRIM25-202ENST00000537230 DIEXFQ68CQ4 756 aaKnown RBP19.29■□□□□ 0.68
TRIM25-202ENST00000537230 TOPBP1Q92547 1522 aa19.26■□□□□ 0.67
TRIM25-202ENST00000537230 DNMBPQ6XZF7 1577 aa19.26■□□□□ 0.67
TRIM25-202ENST00000537230 POLA1P09884 1462 aaPredicted RBP19.25■□□□□ 0.67
TRIM25-202ENST00000537230 MYT1Q01538 1121 aa19.23■□□□□ 0.67
TRIM25-202ENST00000537230 ABCA10Q8WWZ4 1543 aa19.19■□□□□ 0.66
TRIM25-202ENST00000537230 P3H3Q8IVL6 736 aa19.18■□□□□ 0.66
TRIM25-202ENST00000537230 GTF3C3Q9Y5Q9 886 aa19.18■□□□□ 0.66
TRIM25-202ENST00000537230 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
TRIM25-202ENST00000537230 RRBP1Q9P2E9 1410 aaKnown RBP19.16■□□□□ 0.66
TRIM25-202ENST00000537230 LAMC3Q9Y6N6 1575 aa19.14■□□□□ 0.65
TRIM25-202ENST00000537230 CENPBP07199 599 aaPredicted RBP19.14■□□□□ 0.65
TRIM25-202ENST00000537230 ZNF316A6NFI3 1004 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms