RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 FHAD1B1AJZ9 1412 aa26.31■■□□□ 1.8
RAB40C-203ENST00000535977 POLA1P09884 1462 aaPredicted RBP26.3■■□□□ 1.8
RAB40C-203ENST00000535977 CCNB3Q8WWL7 1395 aa26.3■■□□□ 1.8
RAB40C-203ENST00000535977 TIAM1Q13009 1591 aa26.27■■□□□ 1.8
RAB40C-203ENST00000535977 CUL7Q14999 1698 aa26.26■■□□□ 1.79
RAB40C-203ENST00000535977 DHX57Q6P158 1386 aaKnown RBP26.24■■□□□ 1.79
RAB40C-203ENST00000535977 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
RAB40C-203ENST00000535977 ANP32EQ9BTT0 268 aa26.21■■□□□ 1.79
RAB40C-203ENST00000535977 EFCAB5A4FU69 1503 aa26.2■■□□□ 1.78
RAB40C-203ENST00000535977 LRRC9Q6ZRR7 1453 aa26.17■■□□□ 1.78
RAB40C-203ENST00000535977 MIER1Q8N108 512 aa26.16■■□□□ 1.78
RAB40C-203ENST00000535977 PDS5BQ9NTI5 1447 aa26.15■■□□□ 1.78
RAB40C-203ENST00000535977 AQRO60306 1485 aaKnown RBP eCLIP26.12■■□□□ 1.772e-6■■■■■ 26.9
RAB40C-203ENST00000535977 ERCC6Q03468 1493 aa26.12■■□□□ 1.77
RAB40C-203ENST00000535977 WDR97A6NE52 1622 aa26.11■■□□□ 1.77
RAB40C-203ENST00000535977 URB2Q14146 1524 aaKnown RBP26.11■■□□□ 1.77
RAB40C-203ENST00000535977 CFAP43Q8NDM7 1665 aa26.11■■□□□ 1.77
RAB40C-203ENST00000535977 CTTNBP2Q8WZ74 1663 aa26.09■■□□□ 1.77
RAB40C-203ENST00000535977 FYCO1Q9BQS8 1478 aa26.09■■□□□ 1.77
RAB40C-203ENST00000535977 CASKIN1Q8WXD9 1431 aa26.06■■□□□ 1.76
RAB40C-203ENST00000535977 PCF11O94913 1555 aaKnown RBP26.06■■□□□ 1.76
RAB40C-203ENST00000535977 ABCA5Q8WWZ7 1642 aa26.02■■□□□ 1.76
RAB40C-203ENST00000535977 FMN1Q68DA7 1419 aa26.02■■□□□ 1.76
RAB40C-203ENST00000535977 KIF21AQ7Z4S6 1674 aa26.02■■□□□ 1.76
RAB40C-203ENST00000535977 FHOD3Q2V2M9 1422 aa25.99■■□□□ 1.75
RAB40C-203ENST00000535977 GAPVD1Q14C86 1478 aa25.99■■□□□ 1.75
RAB40C-203ENST00000535977 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.98■■□□□ 1.751e-6■■■□□ 17.3
RAB40C-203ENST00000535977 PHLDB1Q86UU1 1377 aa25.98■■□□□ 1.75
RAB40C-203ENST00000535977 P3H3Q8IVL6 736 aa25.97■■□□□ 1.75
RAB40C-203ENST00000535977 TSHZ2Q9NRE2 1034 aa25.97■■□□□ 1.75
RAB40C-203ENST00000535977 SUPT16HQ9Y5B9 1047 aaKnown RBP25.96■■□□□ 1.75
RAB40C-203ENST00000535977 SETD5Q9C0A6 1442 aa25.96■■□□□ 1.75
RAB40C-203ENST00000535977 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.74
RAB40C-203ENST00000535977 ITGAEP38570 1179 aa25.92■■□□□ 1.74
RAB40C-203ENST00000535977 TDRD9Q8NDG6 1382 aaKnown RBP25.91■■□□□ 1.74
RAB40C-203ENST00000535977 ATP1B4Q9UN42 357 aaPredicted RBP25.89■■□□□ 1.73
RAB40C-203ENST00000535977 SAMD9Q5K651 1589 aa25.89■■□□□ 1.73
RAB40C-203ENST00000535977 SNAPC4Q5SXM2 1469 aa25.85■■□□□ 1.73
RAB40C-203ENST00000535977 FAM50AQ14320 339 aaKnown RBP25.85■■□□□ 1.73
RAB40C-203ENST00000535977 TARBP1Q13395 1621 aaKnown RBP25.83■■□□□ 1.73
RAB40C-203ENST00000535977 THOC2Q8NI27 1593 aaKnown RBP25.82■■□□□ 1.72
RAB40C-203ENST00000535977 MAPKBP1O60336 1514 aa25.79■■□□□ 1.72
RAB40C-203ENST00000535977 TIMELESSQ9UNS1 1208 aa25.77■■□□□ 1.72
RAB40C-203ENST00000535977 MRC2Q9UBG0 1479 aa25.76■■□□□ 1.71
RAB40C-203ENST00000535977 MTUS2Q5JR59 1369 aa25.75■■□□□ 1.71
RAB40C-203ENST00000535977 GRIN2BQ13224 1484 aa25.74■■□□□ 1.71
RAB40C-203ENST00000535977 FGD6Q6ZV73 1430 aa25.74■■□□□ 1.71
RAB40C-203ENST00000535977 PBRM1Q86U86 1689 aa25.69■■□□□ 1.7
RAB40C-203ENST00000535977 CCDC18Q5T9S5 1454 aa25.66■■□□□ 1.7
RAB40C-203ENST00000535977 EHBP1L1Q8N3D4 1523 aa25.66■■□□□ 1.7
RAB40C-203ENST00000535977 PRKCSHP14314 528 aaPredicted RBP25.64■■□□□ 1.7
RAB40C-203ENST00000535977 SUPT6HQ7KZ85 1726 aaKnown RBP25.64■■□□□ 1.7
RAB40C-203ENST00000535977 MYOM3Q5VTT5 1437 aa25.62■■□□□ 1.69
RAB40C-203ENST00000535977 ADAMTS12P58397 1594 aa25.62■■□□□ 1.69
RAB40C-203ENST00000535977 NCOA2Q15596 1464 aa25.61■■□□□ 1.69
RAB40C-203ENST00000535977 LRRIQ1Q96JM4 1722 aa25.61■■□□□ 1.69
RAB40C-203ENST00000535977 IQGAP2Q13576 1575 aa25.6■■□□□ 1.69
RAB40C-203ENST00000535977 WDR62O43379 1518 aa25.6■■□□□ 1.69
RAB40C-203ENST00000535977 HFM1A2PYH4 1435 aa25.58■■□□□ 1.69
RAB40C-203ENST00000535977 IFT140Q96RY7 1462 aa25.58■■□□□ 1.69
RAB40C-203ENST00000535977 HECW1Q76N89 1606 aa25.57■■□□□ 1.68
RAB40C-203ENST00000535977 ARHGEF11O15085 1522 aa25.55■■□□□ 1.68
RAB40C-203ENST00000535977 UGGT2Q9NYU1 1516 aa25.54■■□□□ 1.68
RAB40C-203ENST00000535977 UACAQ9BZF9 1416 aa25.51■■□□□ 1.67
RAB40C-203ENST00000535977 SIN3AQ96ST3 1273 aa25.49■■□□□ 1.67
RAB40C-203ENST00000535977 PTPN23Q9H3S7 1636 aa25.49■■□□□ 1.67
RAB40C-203ENST00000535977 TCOF1Q13428 1488 aaKnown RBP25.47■■□□□ 1.67
RAB40C-203ENST00000535977 PTPRKQ15262 1439 aa25.46■■□□□ 1.67
RAB40C-203ENST00000535977 EPRSP07814 1512 aaKnown RBP25.45■■□□□ 1.67
RAB40C-203ENST00000535977 NAIPQ13075 1403 aa25.44■■□□□ 1.66
RAB40C-203ENST00000535977 PPP1R15AO75807 674 aaPredicted RBP25.44■■□□□ 1.66
RAB40C-203ENST00000535977 MIA2Q96PC5 1412 aa25.43■■□□□ 1.66
RAB40C-203ENST00000535977 KIAA0586Q9BVV6 1533 aa25.43■■□□□ 1.66
RAB40C-203ENST00000535977 MAGI3Q5TCQ9 1506 aa25.42■■□□□ 1.66
RAB40C-203ENST00000535977 AKNAQ7Z591 1439 aa25.4■■□□□ 1.66
RAB40C-203ENST00000535977 ZNF608Q9ULD9 1512 aaPredicted RBP25.36■■□□□ 1.65
RAB40C-203ENST00000535977 TONSLQ96HA7 1378 aa25.35■■□□□ 1.65
RAB40C-203ENST00000535977 BCANQ96GW7 911 aa25.34■■□□□ 1.65
RAB40C-203ENST00000535977 KIAA0556O60303 1618 aa25.31■■□□□ 1.64
RAB40C-203ENST00000535977 GCC2Q8IWJ2 1684 aa25.31■■□□□ 1.64
RAB40C-203ENST00000535977 GRIN2AQ12879 1464 aa25.31■■□□□ 1.64
RAB40C-203ENST00000535977 RBM19Q9Y4C8 960 aaKnown RBP25.3■■□□□ 1.64
RAB40C-203ENST00000535977 CDK13Q14004 1512 aaKnown RBP25.29■■□□□ 1.64
RAB40C-203ENST00000535977 DISP1Q96F81 1524 aa25.28■■□□□ 1.64
RAB40C-203ENST00000535977 MAGI1Q96QZ7 1491 aaPredicted RBP25.27■■□□□ 1.64
RAB40C-203ENST00000535977 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
RAB40C-203ENST00000535977 CDK11AQ9UQ88 783 aaPredicted RBP25.26■■□□□ 1.63
RAB40C-203ENST00000535977 RAPGEF6Q8TEU7 1601 aa25.22■■□□□ 1.63
RAB40C-203ENST00000535977 ROCK1Q13464 1354 aa25.21■■□□□ 1.63
RAB40C-203ENST00000535977 DDX10Q13206 875 aaKnown RBP25.2■■□□□ 1.62
RAB40C-203ENST00000535977 RRP7BPQ9NSQ0 103 aa25.2■■□□□ 1.62
RAB40C-203ENST00000535977 NUP153P49790 1475 aaKnown RBP25.18■■□□□ 1.62
RAB40C-203ENST00000535977 SYNJ2O15056 1496 aa25.18■■□□□ 1.62
RAB40C-203ENST00000535977 FKBP8Q14318 412 aa25.17■■□□□ 1.62
RAB40C-203ENST00000535977 CHIC2Q9UKJ5 165 aa25.16■■□□□ 1.62
RAB40C-203ENST00000535977 MSH5O43196 834 aa25.14■■□□□ 1.62
RAB40C-203ENST00000535977 CHMP7Q8WUX9 453 aaPredicted RBP25.14■■□□□ 1.62
RAB40C-203ENST00000535977 TRIM52Q96A61 297 aa25.13■■□□□ 1.61
RAB40C-203ENST00000535977 DAPK1P53355 1430 aa25.12■■□□□ 1.61
RAB40C-203ENST00000535977 CCER2I3L3R5 266 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms