RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 ERCC6L2Q5T890 1561 aa21.9■■□□□ 1.1
DDB1-207ENST00000535967 GRIN2AQ12879 1464 aa21.83■■□□□ 1.09
DDB1-207ENST00000535967 ADAMTS12P58397 1594 aa21.82■■□□□ 1.08
DDB1-207ENST00000535967 CEP170Q5SW79 1584 aa21.82■■□□□ 1.08
DDB1-207ENST00000535967 NUP160Q12769 1436 aa21.78■■□□□ 1.08
DDB1-207ENST00000535967 SHROOM2Q13796 1616 aa21.73■■□□□ 1.07
DDB1-207ENST00000535967 FHAD1B1AJZ9 1412 aa21.69■■□□□ 1.06
DDB1-207ENST00000535967 ERICH3Q5RHP9 1530 aa21.65■■□□□ 1.06
DDB1-207ENST00000535967 KIF13AQ9H1H9 1805 aa21.61■■□□□ 1.05
DDB1-207ENST00000535967 MAPK8IP2Q13387 824 aaPredicted RBP21.58■■□□□ 1.05
DDB1-207ENST00000535967 SCAF1Q9H7N4 1312 aaKnown RBP21.58■■□□□ 1.04
DDB1-207ENST00000535967 PRG4Q92954 1404 aaPredicted RBP21.57■■□□□ 1.04
DDB1-207ENST00000535967 RUSC2Q8N2Y8 1516 aa21.53■■□□□ 1.04
DDB1-207ENST00000535967 KCNA4P22459 653 aa21.52■■□□□ 1.04
DDB1-207ENST00000535967 JPH4Q96JJ6 628 aa21.51■■□□□ 1.03
DDB1-207ENST00000535967 KIF27Q86VH2 1401 aa21.49■■□□□ 1.03
DDB1-207ENST00000535967 CUL7Q14999 1698 aa21.47■■□□□ 1.03
DDB1-207ENST00000535967 ADCY10Q96PN6 1610 aa21.42■■□□□ 1.02
DDB1-207ENST00000535967 ABCC10Q5T3U5 1492 aa21.39■■□□□ 1.02
DDB1-207ENST00000535967 MAPKBP1O60336 1514 aa21.38■■□□□ 1.01
DDB1-207ENST00000535967 DIP2BQ9P265 1576 aa21.37■■□□□ 1.01
DDB1-207ENST00000535967 FAM69CQ0P6D2 419 aa21.37■■□□□ 1.01
DDB1-207ENST00000535967 IGF1RP08069 1367 aa21.33■■□□□ 1.01
DDB1-207ENST00000535967 KIAA0586Q9BVV6 1533 aa21.33■■□□□ 1
DDB1-207ENST00000535967 NPM1P06748 294 aaKnown RBP eCLIP21.29■■□□□ 1
DDB1-207ENST00000535967 EEA1Q15075 1411 aa21.28■■□□□ 1
DDB1-207ENST00000535967 TSPOAP1O95153 1857 aa21.28■■□□□ 1
DDB1-207ENST00000535967 NCBP3Q53F19 620 aaKnown RBP21.27■■□□□ 1
DDB1-207ENST00000535967 CNKSR2Q8WXI2 1034 aa21.25■□□□□ 0.99
DDB1-207ENST00000535967 KDM6BO15054 1643 aa21.23■□□□□ 0.99
DDB1-207ENST00000535967 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
DDB1-207ENST00000535967 DMRT2Q9Y5R5 561 aa21.18■□□□□ 0.98
DDB1-207ENST00000535967 RAPGEF2Q9Y4G8 1499 aa21.18■□□□□ 0.98
DDB1-207ENST00000535967 PTPRGP23470 1445 aa21.17■□□□□ 0.98
DDB1-207ENST00000535967 TTBK1Q5TCY1 1321 aaPredicted RBP21.17■□□□□ 0.98
DDB1-207ENST00000535967 KDM4FA0A1W2PPD8 638 aa21.16■□□□□ 0.98
DDB1-207ENST00000535967 CTTNBP2Q8WZ74 1663 aa21.15■□□□□ 0.98
DDB1-207ENST00000535967 PRXQ9BXM0 1461 aa21.15■□□□□ 0.98
DDB1-207ENST00000535967 ABCC2Q92887 1545 aa21.13■□□□□ 0.97
DDB1-207ENST00000535967 IQGAP2Q13576 1575 aa21.11■□□□□ 0.97
DDB1-207ENST00000535967 PPRC1Q5VV67 1664 aaKnown RBP21.11■□□□□ 0.97
DDB1-207ENST00000535967 KIF21BO75037 1637 aa21.11■□□□□ 0.97
DDB1-207ENST00000535967 TNIKQ9UKE5 1360 aa21.11■□□□□ 0.97
DDB1-207ENST00000535967 ASXL2Q76L83 1435 aa21.09■□□□□ 0.97
DDB1-207ENST00000535967 CARMIL2Q6F5E8 1435 aa21.08■□□□□ 0.96
DDB1-207ENST00000535967 NPM3O75607 178 aaKnown RBP21.07■□□□□ 0.96
DDB1-207ENST00000535967 DISP1Q96F81 1524 aa21.07■□□□□ 0.96
DDB1-207ENST00000535967 CSRNP3Q8WYN3 585 aa21.06■□□□□ 0.96
DDB1-207ENST00000535967 GLI2P10070 1586 aa21.04■□□□□ 0.96
DDB1-207ENST00000535967 UHRF1BP1LA0JNW5 1464 aa21.04■□□□□ 0.96
DDB1-207ENST00000535967 PLB1Q6P1J6 1458 aa21.02■□□□□ 0.96
DDB1-207ENST00000535967 UACAQ9BZF9 1416 aa21.01■□□□□ 0.95
DDB1-207ENST00000535967 COL17A1Q9UMD9 1497 aaPredicted RBP20.98■□□□□ 0.95
DDB1-207ENST00000535967 KDM5BQ9UGL1 1544 aa20.97■□□□□ 0.95
DDB1-207ENST00000535967 UGGT2Q9NYU1 1516 aa20.96■□□□□ 0.95
DDB1-207ENST00000535967 ZCCHC11Q5TAX3 1644 aaKnown RBP20.96■□□□□ 0.95
DDB1-207ENST00000535967 MAP3K4Q9Y6R4 1608 aa20.96■□□□□ 0.95
DDB1-207ENST00000535967 FAM9AQ8IZU1 332 aaPredicted RBP20.95■□□□□ 0.95
DDB1-207ENST00000535967 EPRSP07814 1512 aaKnown RBP20.95■□□□□ 0.94
DDB1-207ENST00000535967 KIAA0556O60303 1618 aa20.95■□□□□ 0.94
DDB1-207ENST00000535967 ADGRL1O94910 1474 aa20.92■□□□□ 0.94
DDB1-207ENST00000535967 GOLGA3Q08378 1498 aa20.91■□□□□ 0.94
DDB1-207ENST00000535967 TEX14Q8IWB6 1497 aa20.83■□□□□ 0.92
DDB1-207ENST00000535967 RNF216Q9NWF9 866 aaPredicted RBP20.82■□□□□ 0.92
DDB1-207ENST00000535967 WDR7Q9Y4E6 1490 aa20.82■□□□□ 0.92
DDB1-207ENST00000535967 SAMD9Q5K651 1589 aa20.8■□□□□ 0.92
DDB1-207ENST00000535967 ILDR1Q86SU0 546 aaPredicted RBP20.77■□□□□ 0.91
DDB1-207ENST00000535967 ABCA8O94911 1581 aa20.77■□□□□ 0.91
DDB1-207ENST00000535967 EFCAB5A4FU69 1503 aa20.75■□□□□ 0.91
DDB1-207ENST00000535967 HOXD11P31277 338 aaPredicted RBP20.74■□□□□ 0.91
DDB1-207ENST00000535967 HECW2Q9P2P5 1572 aa20.74■□□□□ 0.91
DDB1-207ENST00000535967 CFAP43Q8NDM7 1665 aa20.72■□□□□ 0.91
DDB1-207ENST00000535967 CD109Q6YHK3 1445 aa20.71■□□□□ 0.91
DDB1-207ENST00000535967 MAGI3Q5TCQ9 1506 aa20.71■□□□□ 0.91
DDB1-207ENST00000535967 KCNH8Q96L42 1107 aa20.7■□□□□ 0.9
DDB1-207ENST00000535967 UBTFP17480 764 aaKnown RBP20.68■□□□□ 0.9
DDB1-207ENST00000535967 ARID3CA6NKF2 412 aa20.63■□□□□ 0.89
DDB1-207ENST00000535967 EHMT2Q96KQ7 1210 aa20.61■□□□□ 0.89
DDB1-207ENST00000535967 ATP10BO94823 1461 aa20.59■□□□□ 0.89
DDB1-207ENST00000535967 P3H3Q8IVL6 736 aa20.59■□□□□ 0.89
DDB1-207ENST00000535967 ARHGAP35Q9NRY4 1499 aa20.57■□□□□ 0.88
DDB1-207ENST00000535967 ARAP3Q8WWN8 1544 aa20.56■□□□□ 0.88
DDB1-207ENST00000535967 RAPGEF6Q8TEU7 1601 aa20.56■□□□□ 0.88
DDB1-207ENST00000535967 FHOD3Q2V2M9 1422 aa20.54■□□□□ 0.88
DDB1-207ENST00000535967 ABCA9Q8IUA7 1624 aa20.53■□□□□ 0.88
DDB1-207ENST00000535967 RANGAP1P46060 587 aaPredicted RBP20.49■□□□□ 0.87
DDB1-207ENST00000535967 CLIP1P30622 1438 aa20.49■□□□□ 0.87
DDB1-207ENST00000535967 FMN1Q68DA7 1419 aa20.47■□□□□ 0.87
DDB1-207ENST00000535967 ADAMTSL3P82987 1691 aa20.47■□□□□ 0.87
DDB1-207ENST00000535967 RAPGEF3O95398 923 aa20.46■□□□□ 0.87
DDB1-207ENST00000535967 FRMPD1Q5SYB0 1578 aa20.46■□□□□ 0.87
DDB1-207ENST00000535967 CEP162Q5TB80 1403 aa20.45■□□□□ 0.86
DDB1-207ENST00000535967 HECW1Q76N89 1606 aa20.45■□□□□ 0.86
DDB1-207ENST00000535967 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
DDB1-207ENST00000535967 NUP153P49790 1475 aaKnown RBP20.43■□□□□ 0.86
DDB1-207ENST00000535967 PTPRMP28827 1452 aa20.43■□□□□ 0.86
DDB1-207ENST00000535967 NEO1Q92859 1461 aa20.41■□□□□ 0.86
DDB1-207ENST00000535967 PCF11O94913 1555 aaKnown RBP20.4■□□□□ 0.86
DDB1-207ENST00000535967 PHLDB1Q86UU1 1377 aa20.39■□□□□ 0.86
DDB1-207ENST00000535967 BCORL1Q5H9F3 1711 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms