RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 IGF1RP08069 1367 aa29.52■■■□□ 2.32
CAPRIN1-216ENST00000534042 CUL7Q14999 1698 aa29.46■■■□□ 2.31
CAPRIN1-216ENST00000534042 KIAA0586Q9BVV6 1533 aa29.45■■■□□ 2.31
CAPRIN1-216ENST00000534042 AEBP2Q6ZN18 517 aaPredicted RBP29.43■■■□□ 2.3
CAPRIN1-216ENST00000534042 KIF13AQ9H1H9 1805 aa29.43■■■□□ 2.3
CAPRIN1-216ENST00000534042 NPM1P06748 294 aaKnown RBP eCLIP29.42■■■□□ 2.3
CAPRIN1-216ENST00000534042 CARMIL1Q5VZK9 1371 aa29.35■■■□□ 2.29
CAPRIN1-216ENST00000534042 ADCY10Q96PN6 1610 aa29.31■■■□□ 2.28
CAPRIN1-216ENST00000534042 FAM69CQ0P6D2 419 aa29.31■■■□□ 2.28
CAPRIN1-216ENST00000534042 MAPKBP1O60336 1514 aa29.3■■■□□ 2.28
CAPRIN1-216ENST00000534042 ABCC10Q5T3U5 1492 aa29.29■■■□□ 2.28
CAPRIN1-216ENST00000534042 PTPRGP23470 1445 aa29.22■■■□□ 2.27
CAPRIN1-216ENST00000534042 DIP2BQ9P265 1576 aa29.2■■■□□ 2.26
CAPRIN1-216ENST00000534042 CARMIL2Q6F5E8 1435 aa29.19■■■□□ 2.26
CAPRIN1-216ENST00000534042 TTBK1Q5TCY1 1321 aaPredicted RBP29.19■■■□□ 2.26
CAPRIN1-216ENST00000534042 TNIKQ9UKE5 1360 aa29.15■■■□□ 2.26
CAPRIN1-216ENST00000534042 IQGAP2Q13576 1575 aa29.14■■■□□ 2.26
CAPRIN1-216ENST00000534042 TSPOAP1O95153 1857 aa29.06■■■□□ 2.24
CAPRIN1-216ENST00000534042 RAPGEF2Q9Y4G8 1499 aa29.05■■■□□ 2.24
CAPRIN1-216ENST00000534042 ABCC2Q92887 1545 aa29.04■■■□□ 2.24
CAPRIN1-216ENST00000534042 DISP1Q96F81 1524 aa28.99■■■□□ 2.23
CAPRIN1-216ENST00000534042 KDM6BO15054 1643 aa28.99■■■□□ 2.23
CAPRIN1-216ENST00000534042 UHRF1BP1LA0JNW5 1464 aa28.98■■■□□ 2.23
CAPRIN1-216ENST00000534042 UACAQ9BZF9 1416 aa28.98■■■□□ 2.23
CAPRIN1-216ENST00000534042 UGGT2Q9NYU1 1516 aa28.96■■■□□ 2.23
CAPRIN1-216ENST00000534042 PLB1Q6P1J6 1458 aa28.96■■■□□ 2.23
CAPRIN1-216ENST00000534042 ASXL2Q76L83 1435 aa28.95■■■□□ 2.23
CAPRIN1-216ENST00000534042 GLI2P10070 1586 aa28.88■■■□□ 2.21
CAPRIN1-216ENST00000534042 KIAA0556O60303 1618 aa28.87■■■□□ 2.21
CAPRIN1-216ENST00000534042 KDM5BQ9UGL1 1544 aa28.84■■■□□ 2.21
CAPRIN1-216ENST00000534042 CTTNBP2Q8WZ74 1663 aa28.81■■■□□ 2.2
CAPRIN1-216ENST00000534042 PPRC1Q5VV67 1664 aaKnown RBP28.8■■■□□ 2.2
CAPRIN1-216ENST00000534042 ZCCHC11Q5TAX3 1644 aaKnown RBP28.78■■■□□ 2.2
CAPRIN1-216ENST00000534042 EPRSP07814 1512 aaKnown RBP28.77■■■□□ 2.2
CAPRIN1-216ENST00000534042 GOLGA3Q08378 1498 aa28.75■■■□□ 2.19
CAPRIN1-216ENST00000534042 KDM4FA0A1W2PPD8 638 aa28.74■■■□□ 2.19
CAPRIN1-216ENST00000534042 PRXQ9BXM0 1461 aa28.72■■■□□ 2.19
CAPRIN1-216ENST00000534042 MAP3K4Q9Y6R4 1608 aa28.7■■■□□ 2.19
CAPRIN1-216ENST00000534042 TEX14Q8IWB6 1497 aa28.66■■■□□ 2.18
CAPRIN1-216ENST00000534042 WDR7Q9Y4E6 1490 aa28.66■■■□□ 2.18
CAPRIN1-216ENST00000534042 ABCA8O94911 1581 aa28.62■■■□□ 2.17
CAPRIN1-216ENST00000534042 COL17A1Q9UMD9 1497 aaPredicted RBP28.62■■■□□ 2.17
CAPRIN1-216ENST00000534042 FAM9AQ8IZU1 332 aaPredicted RBP28.57■■■□□ 2.16
CAPRIN1-216ENST00000534042 KCNH8Q96L42 1107 aa28.56■■■□□ 2.16
CAPRIN1-216ENST00000534042 CSRNP3Q8WYN3 585 aa28.53■■■□□ 2.16
CAPRIN1-216ENST00000534042 CD109Q6YHK3 1445 aa28.52■■■□□ 2.16
CAPRIN1-216ENST00000534042 P3H3Q8IVL6 736 aa28.51■■■□□ 2.15
CAPRIN1-216ENST00000534042 CFAP43Q8NDM7 1665 aa28.49■■■□□ 2.15
CAPRIN1-216ENST00000534042 ADGRL1O94910 1474 aa28.48■■■□□ 2.15
CAPRIN1-216ENST00000534042 MAGI3Q5TCQ9 1506 aa28.48■■■□□ 2.15
CAPRIN1-216ENST00000534042 ARID3CA6NKF2 412 aa28.44■■■□□ 2.14
CAPRIN1-216ENST00000534042 ATP10BO94823 1461 aa28.4■■■□□ 2.14
CAPRIN1-216ENST00000534042 SAMD9Q5K651 1589 aa28.37■■■□□ 2.13
CAPRIN1-216ENST00000534042 EEA1Q15075 1411 aa28.37■■■□□ 2.13
CAPRIN1-216ENST00000534042 RAPGEF6Q8TEU7 1601 aa28.31■■■□□ 2.12
CAPRIN1-216ENST00000534042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.29■■■□□ 2.12
CAPRIN1-216ENST00000534042 RANGAP1P46060 587 aaPredicted RBP28.29■■■□□ 2.12
CAPRIN1-216ENST00000534042 HNRNPUL2Q1KMD3 747 aaKnown RBP28.29■■■□□ 2.12
CAPRIN1-216ENST00000534042 ARAP3Q8WWN8 1544 aa28.26■■■□□ 2.11
CAPRIN1-216ENST00000534042 ABCA9Q8IUA7 1624 aa28.25■■■□□ 2.11
CAPRIN1-216ENST00000534042 PHLDB1Q86UU1 1377 aa28.22■■■□□ 2.11
CAPRIN1-216ENST00000534042 FHOD3Q2V2M9 1422 aa28.21■■■□□ 2.11
CAPRIN1-216ENST00000534042 NUP153P49790 1475 aaKnown RBP28.2■■■□□ 2.1
CAPRIN1-216ENST00000534042 KIF21BO75037 1637 aa28.17■■■□□ 2.1
CAPRIN1-216ENST00000534042 NEO1Q92859 1461 aa28.14■■■□□ 2.09
CAPRIN1-216ENST00000534042 PLEKHD1A6NEE1 506 aa28.12■■■□□ 2.09
CAPRIN1-216ENST00000534042 RAPGEF3O95398 923 aa28.11■■■□□ 2.09
CAPRIN1-216ENST00000534042 HECW2Q9P2P5 1572 aa28.11■■■□□ 2.09
CAPRIN1-216ENST00000534042 EFCAB5A4FU69 1503 aa28.09■■■□□ 2.09
CAPRIN1-216ENST00000534042 UBTFP17480 764 aaKnown RBP28■■■□□ 2.07
CAPRIN1-216ENST00000534042 EHMT2Q96KQ7 1210 aa27.99■■■□□ 2.07
CAPRIN1-216ENST00000534042 FRMPD1Q5SYB0 1578 aa27.99■■■□□ 2.07
CAPRIN1-216ENST00000534042 AKNAQ7Z591 1439 aa27.95■■■□□ 2.07
CAPRIN1-216ENST00000534042 ILDR1Q86SU0 546 aaPredicted RBP27.95■■■□□ 2.06
CAPRIN1-216ENST00000534042 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.95■■■□□ 2.062e-25■□□□□ 8.2
CAPRIN1-216ENST00000534042 DENND4BO75064 1496 aaPredicted RBP27.95■■■□□ 2.06
CAPRIN1-216ENST00000534042 ARID4BQ4LE39 1312 aaPredicted RBP27.94■■■□□ 2.06
CAPRIN1-216ENST00000534042 ADAMTSL3P82987 1691 aa27.94■■■□□ 2.06
CAPRIN1-216ENST00000534042 FANCAO15360 1455 aa27.94■■■□□ 2.06
CAPRIN1-216ENST00000534042 CFAP74Q9C0B2 1584 aa27.92■■■□□ 2.06
CAPRIN1-216ENST00000534042 CHIC1Q5VXU3 224 aa27.92■■■□□ 2.06
CAPRIN1-216ENST00000534042 CDK13Q14004 1512 aaKnown RBP27.92■■■□□ 2.06
CAPRIN1-216ENST00000534042 TTC37Q6PGP7 1564 aa27.9■■■□□ 2.06
CAPRIN1-216ENST00000534042 ATP1B4Q9UN42 357 aaPredicted RBP27.9■■■□□ 2.06
CAPRIN1-216ENST00000534042 RICTORQ6R327 1708 aa27.89■■■□□ 2.06
CAPRIN1-216ENST00000534042 PTPRMP28827 1452 aa27.89■■■□□ 2.06
CAPRIN1-216ENST00000534042 BCORL1Q5H9F3 1711 aa27.88■■■□□ 2.05
CAPRIN1-216ENST00000534042 FMN1Q68DA7 1419 aa27.88■■■□□ 2.05
CAPRIN1-216ENST00000534042 ARHGEF40Q8TER5 1519 aa27.86■■■□□ 2.05
CAPRIN1-216ENST00000534042 ARHGAP35Q9NRY4 1499 aa27.84■■■□□ 2.05
CAPRIN1-216ENST00000534042 HECW1Q76N89 1606 aa27.82■■■□□ 2.04
CAPRIN1-216ENST00000534042 MADDQ8WXG6 1647 aa27.81■■■□□ 2.04
CAPRIN1-216ENST00000534042 CDK11AQ9UQ88 783 aaPredicted RBP27.81■■■□□ 2.04
CAPRIN1-216ENST00000534042 PLCH2O75038 1416 aa27.8■■■□□ 2.04
CAPRIN1-216ENST00000534042 ZMYM4Q5VZL5 1548 aa27.79■■■□□ 2.04
CAPRIN1-216ENST00000534042 ZFYVE16Q7Z3T8 1539 aa27.76■■■□□ 2.03
CAPRIN1-216ENST00000534042 SCAPERQ9BY12 1400 aa27.75■■■□□ 2.03
CAPRIN1-216ENST00000534042 MAGI2Q86UL8 1455 aa27.75■■■□□ 2.03
CAPRIN1-216ENST00000534042 YEATS2Q9ULM3 1422 aa27.75■■■□□ 2.03
CAPRIN1-216ENST00000534042 POGZQ7Z3K3 1410 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms