RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 ABCA5Q8WWZ7 1642 aa21.76■■□□□ 1.07
CAPN1-224ENST00000533129 TARBP1Q13395 1621 aaKnown RBP21.75■■□□□ 1.07
CAPN1-224ENST00000533129 CLSPNQ9HAW4 1339 aa21.75■■□□□ 1.07
CAPN1-224ENST00000533129 CUL7Q14999 1698 aa21.74■■□□□ 1.07
CAPN1-224ENST00000533129 ERCC6Q03468 1493 aa21.73■■□□□ 1.07
CAPN1-224ENST00000533129 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
CAPN1-224ENST00000533129 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
CAPN1-224ENST00000533129 THOC2Q8NI27 1593 aaKnown RBP21.65■■□□□ 1.06
CAPN1-224ENST00000533129 IFT140Q96RY7 1462 aa21.64■■□□□ 1.05
CAPN1-224ENST00000533129 APLP2Q06481 763 aa21.61■■□□□ 1.05
CAPN1-224ENST00000533129 SLC24A1O60721 1099 aa21.59■■□□□ 1.05
CAPN1-224ENST00000533129 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
CAPN1-224ENST00000533129 ARAP1Q96P48 1450 aa21.57■■□□□ 1.04
CAPN1-224ENST00000533129 PBRM1Q86U86 1689 aa21.56■■□□□ 1.04
CAPN1-224ENST00000533129 DHX57Q6P158 1386 aaKnown RBP21.54■■□□□ 1.04
CAPN1-224ENST00000533129 ARHGAP35Q9NRY4 1499 aa21.53■■□□□ 1.04
CAPN1-224ENST00000533129 SUPT16HQ9Y5B9 1047 aaKnown RBP21.51■■□□□ 1.03
CAPN1-224ENST00000533129 AQRO60306 1485 aaKnown RBP eCLIP21.51■■□□□ 1.038e-7■■■■□ 24.7
CAPN1-224ENST00000533129 GRIN2BQ13224 1484 aa21.51■■□□□ 1.03
CAPN1-224ENST00000533129 CTTNBP2Q8WZ74 1663 aa21.5■■□□□ 1.03
CAPN1-224ENST00000533129 ZNF608Q9ULD9 1512 aaPredicted RBP21.48■■□□□ 1.03
CAPN1-224ENST00000533129 FHAD1B1AJZ9 1412 aa21.47■■□□□ 1.03
CAPN1-224ENST00000533129 ADAMTS12P58397 1594 aa21.47■■□□□ 1.03
CAPN1-224ENST00000533129 EIF4G3O43432 1585 aaKnown RBP21.44■■□□□ 1.02
CAPN1-224ENST00000533129 EFCAB5A4FU69 1503 aa21.42■■□□□ 1.02
CAPN1-224ENST00000533129 RRBP1Q9P2E9 1410 aaKnown RBP21.37■■□□□ 1.01
CAPN1-224ENST00000533129 SNAPC4Q5SXM2 1469 aa21.34■■□□□ 1.01
CAPN1-224ENST00000533129 MAGI1Q96QZ7 1491 aaPredicted RBP21.32■■□□□ 1
CAPN1-224ENST00000533129 TSHZ2Q9NRE2 1034 aa21.31■■□□□ 1
CAPN1-224ENST00000533129 SAMD9Q5K651 1589 aa21.3■■□□□ 1
CAPN1-224ENST00000533129 FHOD3Q2V2M9 1422 aa21.27■□□□□ 0.99
CAPN1-224ENST00000533129 IQGAP2Q13576 1575 aa21.26■□□□□ 0.99
CAPN1-224ENST00000533129 MAP3K1Q13233 1512 aa21.25■□□□□ 0.99
CAPN1-224ENST00000533129 GRIN2AQ12879 1464 aa21.25■□□□□ 0.99
CAPN1-224ENST00000533129 KANK4Q5T7N3 995 aaPredicted RBP21.25■□□□□ 0.99
CAPN1-224ENST00000533129 SYNJ2O15056 1496 aa21.23■□□□□ 0.99
CAPN1-224ENST00000533129 ANP32EQ9BTT0 268 aa21.23■□□□□ 0.99
CAPN1-224ENST00000533129 P3H3Q8IVL6 736 aa21.22■□□□□ 0.99
CAPN1-224ENST00000533129 FMN1Q68DA7 1419 aa21.22■□□□□ 0.99
CAPN1-224ENST00000533129 PCF11O94913 1555 aaKnown RBP21.22■□□□□ 0.99
CAPN1-224ENST00000533129 CCNB3Q8WWL7 1395 aa21.2■□□□□ 0.98
CAPN1-224ENST00000533129 FYCO1Q9BQS8 1478 aa21.2■□□□□ 0.98
CAPN1-224ENST00000533129 TIAM1Q13009 1591 aa21.19■□□□□ 0.98
CAPN1-224ENST00000533129 KIAA0586Q9BVV6 1533 aa21.19■□□□□ 0.98
CAPN1-224ENST00000533129 CASKIN1Q8WXD9 1431 aa21.18■□□□□ 0.98
CAPN1-224ENST00000533129 UGGT2Q9NYU1 1516 aa21.16■□□□□ 0.98
CAPN1-224ENST00000533129 CFAP43Q8NDM7 1665 aa21.15■□□□□ 0.98
CAPN1-224ENST00000533129 CHMP7Q8WUX9 453 aaPredicted RBP21.14■□□□□ 0.97
CAPN1-224ENST00000533129 MAPKBP1O60336 1514 aa21.14■□□□□ 0.97
CAPN1-224ENST00000533129 CEP170Q5SW79 1584 aa21.1■□□□□ 0.97
CAPN1-224ENST00000533129 LRRC9Q6ZRR7 1453 aa21.09■□□□□ 0.97
CAPN1-224ENST00000533129 NUP160Q12769 1436 aa21.09■□□□□ 0.97
CAPN1-224ENST00000533129 RAB3GAP2Q9H2M9 1393 aa21.08■□□□□ 0.96
CAPN1-224ENST00000533129 KCNH8Q96L42 1107 aa21.05■□□□□ 0.96
CAPN1-224ENST00000533129 KIAA0556O60303 1618 aa21.04■□□□□ 0.96
CAPN1-224ENST00000533129 FBLN2P98095 1184 aa21.04■□□□□ 0.96
CAPN1-224ENST00000533129 ATP1B4Q9UN42 357 aaPredicted RBP21.03■□□□□ 0.96
CAPN1-224ENST00000533129 DISP1Q96F81 1524 aa21.02■□□□□ 0.96
CAPN1-224ENST00000533129 SETD5Q9C0A6 1442 aa20.99■□□□□ 0.95
CAPN1-224ENST00000533129 HECW1Q76N89 1606 aa20.98■□□□□ 0.95
CAPN1-224ENST00000533129 FKBP8Q14318 412 aa20.97■□□□□ 0.95
CAPN1-224ENST00000533129 CCDC18Q5T9S5 1454 aa20.97■□□□□ 0.95
CAPN1-224ENST00000533129 LRRIQ1Q96JM4 1722 aa20.96■□□□□ 0.95
CAPN1-224ENST00000533129 ITGAEP38570 1179 aa20.95■□□□□ 0.94
CAPN1-224ENST00000533129 BCANQ96GW7 911 aa20.94■□□□□ 0.94
CAPN1-224ENST00000533129 TIMELESSQ9UNS1 1208 aa20.92■□□□□ 0.94
CAPN1-224ENST00000533129 CHD1O14646 1710 aa20.92■□□□□ 0.94
CAPN1-224ENST00000533129 CARMIL2Q6F5E8 1435 aa20.92■□□□□ 0.94
CAPN1-224ENST00000533129 PPP1R15AO75807 674 aaPredicted RBP20.91■□□□□ 0.94
CAPN1-224ENST00000533129 DDX10Q13206 875 aaKnown RBP20.91■□□□□ 0.94
CAPN1-224ENST00000533129 JPH4Q96JJ6 628 aa20.9■□□□□ 0.94
CAPN1-224ENST00000533129 CCER2I3L3R5 266 aa20.9■□□□□ 0.94
CAPN1-224ENST00000533129 NEFLP07196 543 aa20.9■□□□□ 0.94
CAPN1-224ENST00000533129 MTUS2Q5JR59 1369 aa20.89■□□□□ 0.94
CAPN1-224ENST00000533129 EHBP1L1Q8N3D4 1523 aa20.89■□□□□ 0.93
CAPN1-224ENST00000533129 PHLDB1Q86UU1 1377 aa20.89■□□□□ 0.93
CAPN1-224ENST00000533129 EPRSP07814 1512 aaKnown RBP20.88■□□□□ 0.93
CAPN1-224ENST00000533129 BCL11AQ9H165 835 aa20.86■□□□□ 0.93
CAPN1-224ENST00000533129 RAPGEF6Q8TEU7 1601 aa20.85■□□□□ 0.93
CAPN1-224ENST00000533129 RBM19Q9Y4C8 960 aaKnown RBP20.84■□□□□ 0.93
CAPN1-224ENST00000533129 SUPT6HQ7KZ85 1726 aaKnown RBP20.82■□□□□ 0.92
CAPN1-224ENST00000533129 SIN3AQ96ST3 1273 aa20.81■□□□□ 0.92
CAPN1-224ENST00000533129 NUP153P49790 1475 aaKnown RBP20.8■□□□□ 0.92
CAPN1-224ENST00000533129 CDK13Q14004 1512 aaKnown RBP20.8■□□□□ 0.92
CAPN1-224ENST00000533129 MAGI3Q5TCQ9 1506 aa20.8■□□□□ 0.92
CAPN1-224ENST00000533129 NCOA2Q15596 1464 aa20.79■□□□□ 0.92
CAPN1-224ENST00000533129 ANP32CO43423 234 aa20.78■□□□□ 0.92
CAPN1-224ENST00000533129 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.78■□□□□ 0.92
CAPN1-224ENST00000533129 SHROOM2Q13796 1616 aa20.78■□□□□ 0.92
CAPN1-224ENST00000533129 ARHGEF11O15085 1522 aa20.77■□□□□ 0.91
CAPN1-224ENST00000533129 PRG4Q92954 1404 aaPredicted RBP20.76■□□□□ 0.91
CAPN1-224ENST00000533129 FGD6Q6ZV73 1430 aa20.75■□□□□ 0.91
CAPN1-224ENST00000533129 PLB1Q6P1J6 1458 aa20.74■□□□□ 0.91
CAPN1-224ENST00000533129 MYOM3Q5VTT5 1437 aa20.73■□□□□ 0.91
CAPN1-224ENST00000533129 ABCA8O94911 1581 aa20.72■□□□□ 0.91
CAPN1-224ENST00000533129 FAM50AQ14320 339 aaKnown RBP20.72■□□□□ 0.91
CAPN1-224ENST00000533129 TRIM52Q96A61 297 aa20.72■□□□□ 0.91
CAPN1-224ENST00000533129 CLASP1Q7Z460 1538 aa20.71■□□□□ 0.91
CAPN1-224ENST00000533129 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
CAPN1-224ENST00000533129 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms