RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 DNAJC5BQ9UF47 199 aa21.77■■□□□ 1.08
SSH3-210ENST00000532881 FHOD3Q2V2M9 1422 aa21.74■■□□□ 1.07
SSH3-210ENST00000532881 CLSPNQ9HAW4 1339 aa21.74■■□□□ 1.07
SSH3-210ENST00000532881 TIAM1Q13009 1591 aa21.73■■□□□ 1.07
SSH3-210ENST00000532881 SIN3AQ96ST3 1273 aa21.72■■□□□ 1.07
SSH3-210ENST00000532881 PELP1Q8IZL8 1130 aaKnown RBP21.71■■□□□ 1.07
SSH3-210ENST00000532881 LRRC9Q6ZRR7 1453 aa21.7■■□□□ 1.06
SSH3-210ENST00000532881 POLA1P09884 1462 aaPredicted RBP21.68■■□□□ 1.06
SSH3-210ENST00000532881 PCF11O94913 1555 aaKnown RBP21.66■■□□□ 1.06
SSH3-210ENST00000532881 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
SSH3-210ENST00000532881 KCNH8Q96L42 1107 aa21.63■■□□□ 1.05
SSH3-210ENST00000532881 MAPKBP1O60336 1514 aa21.63■■□□□ 1.05
SSH3-210ENST00000532881 HIRIP3Q9BW71 556 aaPredicted RBP21.62■■□□□ 1.05
SSH3-210ENST00000532881 TDRD9Q8NDG6 1382 aaKnown RBP21.62■■□□□ 1.05
SSH3-210ENST00000532881 SETD5Q9C0A6 1442 aa21.6■■□□□ 1.05
SSH3-210ENST00000532881 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.05
SSH3-210ENST00000532881 ABCA10Q8WWZ4 1543 aa21.57■■□□□ 1.04
SSH3-210ENST00000532881 FHAD1B1AJZ9 1412 aa21.57■■□□□ 1.04
SSH3-210ENST00000532881 MAP3K1Q13233 1512 aa21.53■■□□□ 1.04
SSH3-210ENST00000532881 URB2Q14146 1524 aaKnown RBP21.52■■□□□ 1.04
SSH3-210ENST00000532881 DDX10Q13206 875 aaKnown RBP21.48■■□□□ 1.03
SSH3-210ENST00000532881 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
SSH3-210ENST00000532881 CFAP43Q8NDM7 1665 aa21.48■■□□□ 1.03
SSH3-210ENST00000532881 ARID3CA6NKF2 412 aa21.46■■□□□ 1.03
SSH3-210ENST00000532881 CASKIN1Q8WXD9 1431 aa21.44■■□□□ 1.02
SSH3-210ENST00000532881 FYCO1Q9BQS8 1478 aa21.42■■□□□ 1.02
SSH3-210ENST00000532881 MTUS2Q5JR59 1369 aa21.4■■□□□ 1.02
SSH3-210ENST00000532881 PTPRKQ15262 1439 aa21.4■■□□□ 1.02
SSH3-210ENST00000532881 CTTNBP2Q8WZ74 1663 aa21.39■■□□□ 1.01
SSH3-210ENST00000532881 GAPVD1Q14C86 1478 aa21.37■■□□□ 1.01
SSH3-210ENST00000532881 CUL7Q14999 1698 aa21.37■■□□□ 1.01
SSH3-210ENST00000532881 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
SSH3-210ENST00000532881 FGD6Q6ZV73 1430 aa21.36■■□□□ 1.01
SSH3-210ENST00000532881 EFCAB5A4FU69 1503 aa21.36■■□□□ 1.01
SSH3-210ENST00000532881 CHIC2Q9UKJ5 165 aa21.35■■□□□ 1.01
SSH3-210ENST00000532881 FMN1Q68DA7 1419 aa21.34■■□□□ 1.01
SSH3-210ENST00000532881 LRRIQ1Q96JM4 1722 aa21.33■■□□□ 1.01
SSH3-210ENST00000532881 SUPT16HQ9Y5B9 1047 aaKnown RBP21.33■■□□□ 1
SSH3-210ENST00000532881 PPP1R15AO75807 674 aaPredicted RBP21.32■■□□□ 1
SSH3-210ENST00000532881 RRP7BPQ9NSQ0 103 aa21.3■■□□□ 1
SSH3-210ENST00000532881 LAMC3Q9Y6N6 1575 aa21.3■■□□□ 1
SSH3-210ENST00000532881 AQRO60306 1485 aaKnown RBP eCLIP21.29■■□□□ 1
SSH3-210ENST00000532881 ABCA5Q8WWZ7 1642 aa21.28■■□□□ 1
SSH3-210ENST00000532881 KIF21AQ7Z4S6 1674 aa21.28■■□□□ 1
SSH3-210ENST00000532881 NCOA2Q15596 1464 aa21.27■■□□□ 1
SSH3-210ENST00000532881 CCDC18Q5T9S5 1454 aa21.26■□□□□ 0.99
SSH3-210ENST00000532881 PDS5BQ9NTI5 1447 aa21.26■□□□□ 0.99
SSH3-210ENST00000532881 MAGI3Q5TCQ9 1506 aa21.23■□□□□ 0.99
SSH3-210ENST00000532881 GRIN2BQ13224 1484 aa21.22■□□□□ 0.99
SSH3-210ENST00000532881 SAMD9Q5K651 1589 aa21.22■□□□□ 0.99
SSH3-210ENST00000532881 TONSLQ96HA7 1378 aa21.21■□□□□ 0.99
SSH3-210ENST00000532881 BCANQ96GW7 911 aa21.21■□□□□ 0.99
SSH3-210ENST00000532881 MYOM3Q5VTT5 1437 aa21.19■□□□□ 0.98
SSH3-210ENST00000532881 NAIPQ13075 1403 aa21.19■□□□□ 0.98
SSH3-210ENST00000532881 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.19■□□□□ 0.98
SSH3-210ENST00000532881 TRIM52Q96A61 297 aa21.18■□□□□ 0.98
SSH3-210ENST00000532881 FOXD1Q16676 465 aa21.17■□□□□ 0.98
SSH3-210ENST00000532881 HFM1A2PYH4 1435 aa21.17■□□□□ 0.98
SSH3-210ENST00000532881 PTPN23Q9H3S7 1636 aa21.17■□□□□ 0.98
SSH3-210ENST00000532881 TARBP1Q13395 1621 aaKnown RBP21.15■□□□□ 0.98
SSH3-210ENST00000532881 UACAQ9BZF9 1416 aa21.13■□□□□ 0.97
SSH3-210ENST00000532881 CDK13Q14004 1512 aaKnown RBP21.13■□□□□ 0.97
SSH3-210ENST00000532881 TIMELESSQ9UNS1 1208 aa21.12■□□□□ 0.97
SSH3-210ENST00000532881 SUPT6HQ7KZ85 1726 aaKnown RBP21.1■□□□□ 0.97
SSH3-210ENST00000532881 ANP32CO43423 234 aa21.07■□□□□ 0.96
SSH3-210ENST00000532881 KDM6BO15054 1643 aa21.07■□□□□ 0.96
SSH3-210ENST00000532881 UGGT2Q9NYU1 1516 aa21.07■□□□□ 0.96
SSH3-210ENST00000532881 ZNF608Q9ULD9 1512 aaPredicted RBP21.07■□□□□ 0.96
SSH3-210ENST00000532881 EHBP1L1Q8N3D4 1523 aa21.06■□□□□ 0.96
SSH3-210ENST00000532881 ZNF644Q9H582 1327 aaPredicted RBP21.06■□□□□ 0.96
SSH3-210ENST00000532881 FKBP8Q14318 412 aa21.05■□□□□ 0.96
SSH3-210ENST00000532881 EPRSP07814 1512 aaKnown RBP21.04■□□□□ 0.96
SSH3-210ENST00000532881 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
SSH3-210ENST00000532881 DENND4BO75064 1496 aaPredicted RBP21.03■□□□□ 0.96
SSH3-210ENST00000532881 IQGAP2Q13576 1575 aa21.01■□□□□ 0.95
SSH3-210ENST00000532881 THOC2Q8NI27 1593 aaKnown RBP21■□□□□ 0.95
SSH3-210ENST00000532881 ARHGEF11O15085 1522 aa21■□□□□ 0.95
SSH3-210ENST00000532881 KDM5BQ9UGL1 1544 aa21■□□□□ 0.95
SSH3-210ENST00000532881 MPHOSPH9Q99550 1183 aa20.98■□□□□ 0.95
SSH3-210ENST00000532881 HSPA5P11021 654 aaKnown RBP20.98■□□□□ 0.95
SSH3-210ENST00000532881 ADAMTS12P58397 1594 aa20.96■□□□□ 0.95
SSH3-210ENST00000532881 TSHZ2Q9NRE2 1034 aa20.95■□□□□ 0.95
SSH3-210ENST00000532881 HECW1Q76N89 1606 aa20.95■□□□□ 0.94
SSH3-210ENST00000532881 L3MBTL2Q969R5 705 aa20.95■□□□□ 0.94
SSH3-210ENST00000532881 FBLN2P98095 1184 aa20.94■□□□□ 0.94
SSH3-210ENST00000532881 WASHC2AQ641Q2 1341 aa20.94■□□□□ 0.94
SSH3-210ENST00000532881 MRC2Q9UBG0 1479 aa20.93■□□□□ 0.94
SSH3-210ENST00000532881 C11orf95C9JLR9 678 aaPredicted RBP20.92■□□□□ 0.94
SSH3-210ENST00000532881 CCER2I3L3R5 266 aa20.92■□□□□ 0.94
SSH3-210ENST00000532881 WDR62O43379 1518 aa20.91■□□□□ 0.94
SSH3-210ENST00000532881 TCOF1Q13428 1488 aaKnown RBP20.91■□□□□ 0.94
SSH3-210ENST00000532881 CCDC184Q52MB2 194 aa20.89■□□□□ 0.93
SSH3-210ENST00000532881 ZNF777Q9ULD5 760 aaPredicted RBP20.89■□□□□ 0.93
SSH3-210ENST00000532881 CNGB1Q14028 1251 aaPredicted RBP20.88■□□□□ 0.93
SSH3-210ENST00000532881 NBPF8Q3BBV2 869 aa20.87■□□□□ 0.93
SSH3-210ENST00000532881 DISP1Q96F81 1524 aa20.86■□□□□ 0.93
SSH3-210ENST00000532881 IRX6P78412 446 aaPredicted RBP20.85■□□□□ 0.93
SSH3-210ENST00000532881 HNRNPUQ00839 825 aaKnown RBP eCLIP20.85■□□□□ 0.93
SSH3-210ENST00000532881 PRG4Q92954 1404 aaPredicted RBP20.84■□□□□ 0.93
SSH3-210ENST00000532881 NUP153P49790 1475 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms