RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 ARID4BQ4LE39 1312 aaPredicted RBP11.82□□□□□ -0.52
CTNND1-232ENST00000532649 TNIKQ9UKE5 1360 aa11.81□□□□□ -0.52
CTNND1-232ENST00000532649 CCDC88BA6NC98 1476 aa11.8□□□□□ -0.52
CTNND1-232ENST00000532649 DDX10Q13206 875 aaKnown RBP11.8□□□□□ -0.52
CTNND1-232ENST00000532649 CARMIL1Q5VZK9 1371 aa11.79□□□□□ -0.52
CTNND1-232ENST00000532649 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
CTNND1-232ENST00000532649 PPP1R15AO75807 674 aaPredicted RBP11.79□□□□□ -0.52
CTNND1-232ENST00000532649 GTF3C3Q9Y5Q9 886 aa11.77□□□□□ -0.53
CTNND1-232ENST00000532649 HSP90AA1P07900 732 aaKnown RBP11.77□□□□□ -0.53
CTNND1-232ENST00000532649 GLIPR1L2Q4G1C9 344 aa11.77□□□□□ -0.53
CTNND1-232ENST00000532649 SCAF1Q9H7N4 1312 aaKnown RBP11.76□□□□□ -0.53
CTNND1-232ENST00000532649 EIF5BO60841 1220 aaKnown RBP11.76□□□□□ -0.53
CTNND1-232ENST00000532649 FAM9BQ8IZU0 186 aa11.75□□□□□ -0.53
CTNND1-232ENST00000532649 SOGA1O94964 1423 aa11.75□□□□□ -0.53
CTNND1-232ENST00000532649 RGL3Q3MIN7 710 aa11.74□□□□□ -0.53
CTNND1-232ENST00000532649 ABCC8Q09428 1581 aa11.73□□□□□ -0.53
CTNND1-232ENST00000532649 SALL2Q9Y467 1007 aaPredicted RBP11.73□□□□□ -0.53
CTNND1-232ENST00000532649 WIZO95785 1651 aa11.72□□□□□ -0.53
CTNND1-232ENST00000532649 A0A0G2JS52 829 aa11.72□□□□□ -0.53
CTNND1-232ENST00000532649 TMC1Q8TDI8 760 aa11.72□□□□□ -0.53
CTNND1-232ENST00000532649 HIRIP3Q9BW71 556 aaPredicted RBP11.72□□□□□ -0.53
CTNND1-232ENST00000532649 HNRNPUQ00839 825 aaKnown RBP eCLIP11.71□□□□□ -0.53
CTNND1-232ENST00000532649 C14orf37Q86TY3 774 aa11.71□□□□□ -0.53
CTNND1-232ENST00000532649 FHAD1B1AJZ9 1412 aa11.71□□□□□ -0.54
CTNND1-232ENST00000532649 TRHP20396 242 aaPredicted RBP11.71□□□□□ -0.54
CTNND1-232ENST00000532649 ANP32AP39687 249 aaKnown RBP11.71□□□□□ -0.54
CTNND1-232ENST00000532649 CCNB3Q8WWL7 1395 aa11.7□□□□□ -0.54
CTNND1-232ENST00000532649 TDRD9Q8NDG6 1382 aaKnown RBP11.7□□□□□ -0.54
CTNND1-232ENST00000532649 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
CTNND1-232ENST00000532649 TOP2AP11388 1531 aaKnown RBP11.69□□□□□ -0.54
CTNND1-232ENST00000532649 EIF4G2P78344 907 aaKnown RBP eCLIP11.69□□□□□ -0.54
CTNND1-232ENST00000532649 WDR43Q15061 677 aaKnown RBP eCLIP11.69□□□□□ -0.543e-9■■■□□ 15.6
CTNND1-232ENST00000532649 ACIN1Q9UKV3 1341 aaKnown RBP11.68□□□□□ -0.54
CTNND1-232ENST00000532649 ZBTB7CA1YPR0 619 aa11.67□□□□□ -0.54
CTNND1-232ENST00000532649 UPF2Q9HAU5 1272 aaKnown RBP11.66□□□□□ -0.54
CTNND1-232ENST00000532649 CADPSQ9ULU8 1353 aa11.66□□□□□ -0.54
CTNND1-232ENST00000532649 NPM2Q86SE8 214 aaKnown RBP11.66□□□□□ -0.54
CTNND1-232ENST00000532649 CARMIL2Q6F5E8 1435 aa11.65□□□□□ -0.54
CTNND1-232ENST00000532649 MRS2Q9HD23 443 aa11.65□□□□□ -0.54
CTNND1-232ENST00000532649 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
CTNND1-232ENST00000532649 SMARCA4P51532 1647 aa11.62□□□□□ -0.55
CTNND1-232ENST00000532649 MLECQ14165 292 aa11.61□□□□□ -0.55
CTNND1-232ENST00000532649 CARD11Q9BXL7 1154 aa11.59□□□□□ -0.55
CTNND1-232ENST00000532649 FKBP8Q14318 412 aa11.59□□□□□ -0.55
CTNND1-232ENST00000532649 HAP1P54257 671 aaPredicted RBP11.58□□□□□ -0.56
CTNND1-232ENST00000532649 KANK1Q14678 1352 aa11.57□□□□□ -0.56
CTNND1-232ENST00000532649 CDCA8Q53HL2 280 aa11.56□□□□□ -0.56
CTNND1-232ENST00000532649 POGKQ9P215 609 aa11.56□□□□□ -0.56
CTNND1-232ENST00000532649 SIN3AQ96ST3 1273 aa11.56□□□□□ -0.56
CTNND1-232ENST00000532649 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.55□□□□□ -0.56
CTNND1-232ENST00000532649 ARHGAP35Q9NRY4 1499 aa11.55□□□□□ -0.56
CTNND1-232ENST00000532649 VPS8Q8N3P4 1428 aa11.54□□□□□ -0.56
CTNND1-232ENST00000532649 TULP1O00294 542 aaPredicted RBP11.54□□□□□ -0.56
CTNND1-232ENST00000532649 KNSTRNQ9Y448 316 aa11.54□□□□□ -0.56
CTNND1-232ENST00000532649 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
CTNND1-232ENST00000532649 FMN1Q68DA7 1419 aa11.53□□□□□ -0.56
CTNND1-232ENST00000532649 GGT6Q6P531 493 aa11.53□□□□□ -0.56
CTNND1-232ENST00000532649 PPM1GO15355 546 aaPredicted RBP11.53□□□□□ -0.56
CTNND1-232ENST00000532649 MIER1Q8N108 512 aa11.52□□□□□ -0.57
CTNND1-232ENST00000532649 RAPGEF2Q9Y4G8 1499 aa11.52□□□□□ -0.57
CTNND1-232ENST00000532649 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
CTNND1-232ENST00000532649 CFAP53Q96M91 514 aa11.51□□□□□ -0.57
CTNND1-232ENST00000532649 MYH16Q9H6N6 1097 aa11.51□□□□□ -0.57
CTNND1-232ENST00000532649 KANK4Q5T7N3 995 aaPredicted RBP11.51□□□□□ -0.57
CTNND1-232ENST00000532649 DCAF11Q8TEB1 546 aa11.5□□□□□ -0.57
CTNND1-232ENST00000532649 EFCAB2Q5VUJ9 269 aa11.5□□□□□ -0.57
CTNND1-232ENST00000532649 CCDC136Q96JN2 1154 aa11.48□□□□□ -0.57
CTNND1-232ENST00000532649 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
CTNND1-232ENST00000532649 FHOD3Q2V2M9 1422 aa11.48□□□□□ -0.57
CTNND1-232ENST00000532649 HDGFP51858 240 aaKnown RBP11.47□□□□□ -0.57
CTNND1-232ENST00000532649 SENP3-EIF4A1A0A087X0R7 540 aa11.46□□□□□ -0.58
CTNND1-232ENST00000532649 NCLP19338 710 aaKnown RBP11.46□□□□□ -0.58
CTNND1-232ENST00000532649 SETD5Q9C0A6 1442 aa11.45□□□□□ -0.58
CTNND1-232ENST00000532649 PKD2Q13563 968 aa11.45□□□□□ -0.58
CTNND1-232ENST00000532649 TNNT2P45379 298 aaPredicted RBP11.44□□□□□ -0.58
CTNND1-232ENST00000532649 IRX6P78412 446 aaPredicted RBP11.43□□□□□ -0.58
CTNND1-232ENST00000532649 ZRSR1Q15695 479 aaKnown RBP11.43□□□□□ -0.58
CTNND1-232ENST00000532649 SAFB2Q14151 953 aaKnown RBP eCLIP11.43□□□□□ -0.58
CTNND1-232ENST00000532649 FOXD1Q16676 465 aa11.43□□□□□ -0.58
CTNND1-232ENST00000532649 NPHP1O15259 732 aa11.43□□□□□ -0.58
CTNND1-232ENST00000532649 ARXQ96QS3 562 aa11.43□□□□□ -0.58
CTNND1-232ENST00000532649 HNRNPMP52272 730 aaKnown RBP eCLIP11.42□□□□□ -0.585e-7■■■■□ 21
CTNND1-232ENST00000532649 TMF1P82094 1093 aa11.42□□□□□ -0.58
CTNND1-232ENST00000532649 ANKRD30AQ9BXX3 1397 aa11.42□□□□□ -0.58
CTNND1-232ENST00000532649 CC2D1BQ5T0F9 858 aaKnown RBP11.41□□□□□ -0.58
CTNND1-232ENST00000532649 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
CTNND1-232ENST00000532649 NEUROD2Q15784 382 aa11.41□□□□□ -0.58
CTNND1-232ENST00000532649 MAPK8IP3Q9UPT6 1336 aa11.41□□□□□ -0.58
CTNND1-232ENST00000532649 NUDCQ9Y266 331 aa11.41□□□□□ -0.58
CTNND1-232ENST00000532649 NUP155O75694 1391 aa11.4□□□□□ -0.58
CTNND1-232ENST00000532649 KIF3BO15066 747 aa11.4□□□□□ -0.58
CTNND1-232ENST00000532649 NCBP3Q53F19 620 aaKnown RBP11.4□□□□□ -0.58
CTNND1-232ENST00000532649 STK26Q9P289 416 aa11.4□□□□□ -0.58
CTNND1-232ENST00000532649 CCDC18Q5T9S5 1454 aa11.4□□□□□ -0.59
CTNND1-232ENST00000532649 LAS1LQ9Y4W2 734 aaKnown RBP11.39□□□□□ -0.59
CTNND1-232ENST00000532649 SPAG9O60271 1321 aaKnown RBP11.38□□□□□ -0.59
CTNND1-232ENST00000532649 FGD5Q6ZNL6 1462 aa11.38□□□□□ -0.59
CTNND1-232ENST00000532649 CYB5RLQ6IPT4 315 aa11.37□□□□□ -0.59
CTNND1-232ENST00000532649 RUSC2Q8N2Y8 1516 aa11.37□□□□□ -0.59
CTNND1-232ENST00000532649 SOX12O15370 315 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms