RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 EIF4G2P78344 907 aaKnown RBP eCLIP20.89■□□□□ 0.94
PCDHA3-202ENST00000532566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.88■□□□□ 0.93
PCDHA3-202ENST00000532566 PLEKHD1A6NEE1 506 aa20.86■□□□□ 0.93
PCDHA3-202ENST00000532566 ATAD2BQ9ULI0 1458 aa20.85■□□□□ 0.93
PCDHA3-202ENST00000532566 NPM1P06748 294 aaKnown RBP eCLIP20.84■□□□□ 0.93
PCDHA3-202ENST00000532566 MRS2Q9HD23 443 aa20.82■□□□□ 0.92
PCDHA3-202ENST00000532566 KDM2AQ9Y2K7 1162 aa20.82■□□□□ 0.92
PCDHA3-202ENST00000532566 TMC1Q8TDI8 760 aa20.8■□□□□ 0.92
PCDHA3-202ENST00000532566 CFDP1Q9UEE9 299 aaPredicted RBP20.8■□□□□ 0.92
PCDHA3-202ENST00000532566 CHGAP10645 457 aaKnown RBP20.79■□□□□ 0.92
PCDHA3-202ENST00000532566 KANK4Q5T7N3 995 aaPredicted RBP20.79■□□□□ 0.92
PCDHA3-202ENST00000532566 CANXP27824 592 aaKnown RBP20.79■□□□□ 0.92
PCDHA3-202ENST00000532566 SIN3AQ96ST3 1273 aa20.79■□□□□ 0.92
PCDHA3-202ENST00000532566 NEFMP07197 916 aa20.73■□□□□ 0.91
PCDHA3-202ENST00000532566 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
PCDHA3-202ENST00000532566 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
PCDHA3-202ENST00000532566 RUSC2Q8N2Y8 1516 aa20.7■□□□□ 0.9
PCDHA3-202ENST00000532566 TIMELESSQ9UNS1 1208 aa20.68■□□□□ 0.9
PCDHA3-202ENST00000532566 ANP32AP39687 249 aaKnown RBP20.68■□□□□ 0.9
PCDHA3-202ENST00000532566 KCNH8Q96L42 1107 aa20.68■□□□□ 0.9
PCDHA3-202ENST00000532566 SALL2Q9Y467 1007 aaPredicted RBP20.68■□□□□ 0.9
PCDHA3-202ENST00000532566 SETD5Q9C0A6 1442 aa20.67■□□□□ 0.9
PCDHA3-202ENST00000532566 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
PCDHA3-202ENST00000532566 ERCC6Q03468 1493 aa20.66■□□□□ 0.9
PCDHA3-202ENST00000532566 ARHGAP35Q9NRY4 1499 aa20.65■□□□□ 0.9
PCDHA3-202ENST00000532566 PDS5BQ9NTI5 1447 aa20.65■□□□□ 0.9
PCDHA3-202ENST00000532566 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
PCDHA3-202ENST00000532566 TDRD9Q8NDG6 1382 aaKnown RBP20.62■□□□□ 0.89
PCDHA3-202ENST00000532566 ESF1Q9H501 851 aaKnown RBP20.62■□□□□ 0.89
PCDHA3-202ENST00000532566 STAG3Q9UJ98 1225 aa20.61■□□□□ 0.89
PCDHA3-202ENST00000532566 FMN1Q68DA7 1419 aa20.6■□□□□ 0.89
PCDHA3-202ENST00000532566 CCDC136Q96JN2 1154 aa20.59■□□□□ 0.89
PCDHA3-202ENST00000532566 RGL3Q3MIN7 710 aa20.58■□□□□ 0.89
PCDHA3-202ENST00000532566 RAB3GAP2Q9H2M9 1393 aa20.57■□□□□ 0.88
PCDHA3-202ENST00000532566 WDR43Q15061 677 aaKnown RBP eCLIP20.56■□□□□ 0.88
PCDHA3-202ENST00000532566 IRX6P78412 446 aaPredicted RBP20.55■□□□□ 0.88
PCDHA3-202ENST00000532566 NPM2Q86SE8 214 aaKnown RBP20.54■□□□□ 0.88
PCDHA3-202ENST00000532566 CARD11Q9BXL7 1154 aa20.53■□□□□ 0.88
PCDHA3-202ENST00000532566 FHOD3Q2V2M9 1422 aa20.48■□□□□ 0.87
PCDHA3-202ENST00000532566 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.48■□□□□ 0.87
PCDHA3-202ENST00000532566 SLC24A1O60721 1099 aa20.45■□□□□ 0.86
PCDHA3-202ENST00000532566 BCL11AQ9H165 835 aa20.44■□□□□ 0.86
PCDHA3-202ENST00000532566 FANCD2Q9BXW9 1451 aa20.41■□□□□ 0.86
PCDHA3-202ENST00000532566 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
PCDHA3-202ENST00000532566 CARMIL2Q6F5E8 1435 aa20.4■□□□□ 0.86
PCDHA3-202ENST00000532566 CDCA8Q53HL2 280 aa20.4■□□□□ 0.86
PCDHA3-202ENST00000532566 CCER2I3L3R5 266 aa20.38■□□□□ 0.85
PCDHA3-202ENST00000532566 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
PCDHA3-202ENST00000532566 PPP1R15AO75807 674 aaPredicted RBP20.36■□□□□ 0.85
PCDHA3-202ENST00000532566 DHX57Q6P158 1386 aaKnown RBP20.36■□□□□ 0.85
PCDHA3-202ENST00000532566 HSPA5P11021 654 aaKnown RBP20.34■□□□□ 0.85
PCDHA3-202ENST00000532566 KNSTRNQ9Y448 316 aa20.34■□□□□ 0.85
PCDHA3-202ENST00000532566 MPHOSPH9Q99550 1183 aa20.34■□□□□ 0.85
PCDHA3-202ENST00000532566 DCAF11Q8TEB1 546 aa20.33■□□□□ 0.85
PCDHA3-202ENST00000532566 IGF1RP08069 1367 aa20.33■□□□□ 0.84
PCDHA3-202ENST00000532566 FOXD1Q16676 465 aa20.32■□□□□ 0.84
PCDHA3-202ENST00000532566 PKD2Q13563 968 aa20.31■□□□□ 0.84
PCDHA3-202ENST00000532566 SENP3-EIF4A1A0A087X0R7 540 aa20.31■□□□□ 0.84
PCDHA3-202ENST00000532566 UPF2Q9HAU5 1272 aaKnown RBP20.31■□□□□ 0.84
PCDHA3-202ENST00000532566 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
PCDHA3-202ENST00000532566 PLPPR3Q6T4P5 718 aa20.27■□□□□ 0.83
PCDHA3-202ENST00000532566 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
PCDHA3-202ENST00000532566 ANKRD30AQ9BXX3 1397 aa20.24■□□□□ 0.83
PCDHA3-202ENST00000532566 KIF21BO75037 1637 aa20.24■□□□□ 0.83
PCDHA3-202ENST00000532566 PPP4R2Q9NY27 417 aa20.22■□□□□ 0.83
PCDHA3-202ENST00000532566 SENP3Q9H4L4 574 aaPredicted RBP20.22■□□□□ 0.83
PCDHA3-202ENST00000532566 NUP155O75694 1391 aa20.21■□□□□ 0.83
PCDHA3-202ENST00000532566 SYNJ1O43426 1573 aa20.21■□□□□ 0.83
PCDHA3-202ENST00000532566 TMF1P82094 1093 aa20.2■□□□□ 0.82
PCDHA3-202ENST00000532566 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
PCDHA3-202ENST00000532566 L3MBTL2Q969R5 705 aa20.19■□□□□ 0.82
PCDHA3-202ENST00000532566 CC2D1BQ5T0F9 858 aaKnown RBP20.17■□□□□ 0.82
PCDHA3-202ENST00000532566 KANK1Q14678 1352 aa20.16■□□□□ 0.82
PCDHA3-202ENST00000532566 RAD54L2Q9Y4B4 1467 aa20.16■□□□□ 0.82
PCDHA3-202ENST00000532566 JPH4Q96JJ6 628 aa20.16■□□□□ 0.82
PCDHA3-202ENST00000532566 GAPVD1Q14C86 1478 aa20.14■□□□□ 0.82
PCDHA3-202ENST00000532566 HSP90AA1P07900 732 aaKnown RBP20.14■□□□□ 0.81
PCDHA3-202ENST00000532566 ERICH3Q5RHP9 1530 aa20.14■□□□□ 0.81
PCDHA3-202ENST00000532566 CFTRP13569 1480 aa20.14■□□□□ 0.81
PCDHA3-202ENST00000532566 NBR1Q14596 966 aa20.13■□□□□ 0.81
PCDHA3-202ENST00000532566 EFCAB2Q5VUJ9 269 aa20.13■□□□□ 0.81
PCDHA3-202ENST00000532566 RSPH4AQ5TD94 716 aa20.08■□□□□ 0.8
PCDHA3-202ENST00000532566 HNRNPMP52272 730 aaKnown RBP eCLIP20.07■□□□□ 0.8
PCDHA3-202ENST00000532566 B4GALNT3Q6L9W6 998 aa20.07■□□□□ 0.8
PCDHA3-202ENST00000532566 ARAP1Q96P48 1450 aa20.06■□□□□ 0.8
PCDHA3-202ENST00000532566 ROCK2O75116 1388 aaKnown RBP20.06■□□□□ 0.8
PCDHA3-202ENST00000532566 LRRC9Q6ZRR7 1453 aa20.05■□□□□ 0.8
PCDHA3-202ENST00000532566 PRXQ9BXM0 1461 aa20.05■□□□□ 0.8
PCDHA3-202ENST00000532566 NEUROD2Q15784 382 aa20.05■□□□□ 0.8
PCDHA3-202ENST00000532566 PHLDB1Q86UU1 1377 aa20.05■□□□□ 0.8
PCDHA3-202ENST00000532566 TOP2BQ02880 1626 aa20.04■□□□□ 0.8
PCDHA3-202ENST00000532566 FGD6Q6ZV73 1430 aa20.04■□□□□ 0.8
PCDHA3-202ENST00000532566 POGKQ9P215 609 aa20.03■□□□□ 0.8
PCDHA3-202ENST00000532566 KTN1Q86UP2 1357 aaKnown RBP20.03■□□□□ 0.8
PCDHA3-202ENST00000532566 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
PCDHA3-202ENST00000532566 NUDCQ9Y266 331 aa20.02■□□□□ 0.79
PCDHA3-202ENST00000532566 MYH16Q9H6N6 1097 aa20.01■□□□□ 0.79
PCDHA3-202ENST00000532566 TNNT2P45379 298 aaPredicted RBP20.01■□□□□ 0.79
PCDHA3-202ENST00000532566 DDRGK1Q96HY6 314 aa20■□□□□ 0.79
PCDHA3-202ENST00000532566 PPM1GO15355 546 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms