RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 KDM4FA0A1W2PPD8 638 aa15.01□□□□□ -0.01
NUP98-219ENST00000532475 JPH4Q96JJ6 628 aa15.01□□□□□ -0.01
NUP98-219ENST00000532475 PRG4Q92954 1404 aaPredicted RBP14.99□□□□□ -0.01
NUP98-219ENST00000532475 WRNQ14191 1432 aaPredicted RBP eCLIP14.98□□□□□ -0.01
NUP98-219ENST00000532475 FHAD1B1AJZ9 1412 aa14.97□□□□□ -0.01
NUP98-219ENST00000532475 ILDR1Q86SU0 546 aaPredicted RBP14.96□□□□□ -0.01
NUP98-219ENST00000532475 KIF13AQ9H1H9 1805 aa14.95□□□□□ -0.02
NUP98-219ENST00000532475 NPM1P06748 294 aaKnown RBP eCLIP14.94□□□□□ -0.02
NUP98-219ENST00000532475 SHROOM2Q13796 1616 aa14.94□□□□□ -0.02
NUP98-219ENST00000532475 ADAMTS12P58397 1594 aa14.94□□□□□ -0.02
NUP98-219ENST00000532475 ABCC10Q5T3U5 1492 aa14.92□□□□□ -0.02
NUP98-219ENST00000532475 SUPT5HO00267 1087 aaKnown RBP14.91□□□□□ -0.02
NUP98-219ENST00000532475 ERICH3Q5RHP9 1530 aa14.83□□□□□ -0.04
NUP98-219ENST00000532475 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.04
NUP98-219ENST00000532475 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
NUP98-219ENST00000532475 TTBK1Q5TCY1 1321 aaPredicted RBP14.8□□□□□ -0.04
NUP98-219ENST00000532475 MAPKBP1O60336 1514 aa14.8□□□□□ -0.04
NUP98-219ENST00000532475 DIP2BQ9P265 1576 aa14.8□□□□□ -0.04
NUP98-219ENST00000532475 ADCY10Q96PN6 1610 aa14.77□□□□□ -0.04
NUP98-219ENST00000532475 RTN4Q9NQC3 1192 aaKnown RBP14.77□□□□□ -0.05
NUP98-219ENST00000532475 KDM6BO15054 1643 aa14.77□□□□□ -0.05
NUP98-219ENST00000532475 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.05
NUP98-219ENST00000532475 PPP6R1Q9UPN7 881 aa14.75□□□□□ -0.05
NUP98-219ENST00000532475 TSPOAP1O95153 1857 aa14.74□□□□□ -0.05
NUP98-219ENST00000532475 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
NUP98-219ENST00000532475 IGF1RP08069 1367 aa14.73□□□□□ -0.05
NUP98-219ENST00000532475 PTPRGP23470 1445 aa14.71□□□□□ -0.05
NUP98-219ENST00000532475 KIAA0586Q9BVV6 1533 aa14.71□□□□□ -0.06
NUP98-219ENST00000532475 COL17A1Q9UMD9 1497 aaPredicted RBP14.67□□□□□ -0.06
NUP98-219ENST00000532475 ADGRL1O94910 1474 aa14.65□□□□□ -0.06
NUP98-219ENST00000532475 ASXL2Q76L83 1435 aa14.65□□□□□ -0.06
NUP98-219ENST00000532475 NCBP3Q53F19 620 aaKnown RBP14.63□□□□□ -0.07
NUP98-219ENST00000532475 TNIKQ9UKE5 1360 aa14.61□□□□□ -0.07
NUP98-219ENST00000532475 ABCC2Q92887 1545 aa14.61□□□□□ -0.07
NUP98-219ENST00000532475 PLB1Q6P1J6 1458 aa14.59□□□□□ -0.07
NUP98-219ENST00000532475 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
NUP98-219ENST00000532475 CARMIL1Q5VZK9 1371 aa14.59□□□□□ -0.07
NUP98-219ENST00000532475 KIF27Q86VH2 1401 aa14.58□□□□□ -0.07
NUP98-219ENST00000532475 PPRC1Q5VV67 1664 aaKnown RBP14.57□□□□□ -0.08
NUP98-219ENST00000532475 CARMIL2Q6F5E8 1435 aa14.56□□□□□ -0.08
NUP98-219ENST00000532475 GLI2P10070 1586 aa14.56□□□□□ -0.08
NUP98-219ENST00000532475 UACAQ9BZF9 1416 aa14.55□□□□□ -0.08
NUP98-219ENST00000532475 HECW2Q9P2P5 1572 aa14.54□□□□□ -0.08
NUP98-219ENST00000532475 EPRSP07814 1512 aaKnown RBP14.53□□□□□ -0.08
NUP98-219ENST00000532475 UHRF1BP1LA0JNW5 1464 aa14.52□□□□□ -0.08
NUP98-219ENST00000532475 DISP1Q96F81 1524 aa14.49□□□□□ -0.09
NUP98-219ENST00000532475 KDM5BQ9UGL1 1544 aa14.48□□□□□ -0.09
NUP98-219ENST00000532475 KCNH8Q96L42 1107 aa14.48□□□□□ -0.09
NUP98-219ENST00000532475 CUL7Q14999 1698 aa14.48□□□□□ -0.09
NUP98-219ENST00000532475 FBXO41Q8TF61 875 aa14.45□□□□□ -0.1
NUP98-219ENST00000532475 MAP3K4Q9Y6R4 1608 aa14.44□□□□□ -0.1
NUP98-219ENST00000532475 TEX14Q8IWB6 1497 aa14.44□□□□□ -0.1
NUP98-219ENST00000532475 IQGAP2Q13576 1575 aa14.43□□□□□ -0.1
NUP98-219ENST00000532475 CD109Q6YHK3 1445 aa14.4□□□□□ -0.1
NUP98-219ENST00000532475 WDR7Q9Y4E6 1490 aa14.38□□□□□ -0.11
NUP98-219ENST00000532475 ZCCHC11Q5TAX3 1644 aaKnown RBP14.38□□□□□ -0.11
NUP98-219ENST00000532475 FOXD1Q16676 465 aa14.38□□□□□ -0.11
NUP98-219ENST00000532475 ZBTB22O15209 634 aa14.37□□□□□ -0.11
NUP98-219ENST00000532475 UGGT2Q9NYU1 1516 aa14.36□□□□□ -0.11
NUP98-219ENST00000532475 ARID3CA6NKF2 412 aa14.35□□□□□ -0.11
NUP98-219ENST00000532475 MAGI3Q5TCQ9 1506 aa14.35□□□□□ -0.11
NUP98-219ENST00000532475 RAPGEF2Q9Y4G8 1499 aa14.34□□□□□ -0.11
NUP98-219ENST00000532475 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
NUP98-219ENST00000532475 KIAA0556O60303 1618 aa14.32□□□□□ -0.12
NUP98-219ENST00000532475 RAPGEF3O95398 923 aa14.31□□□□□ -0.12
NUP98-219ENST00000532475 KIF21BO75037 1637 aa14.28□□□□□ -0.12
NUP98-219ENST00000532475 PTPRMP28827 1452 aa14.28□□□□□ -0.12
NUP98-219ENST00000532475 P3H3Q8IVL6 736 aa14.27□□□□□ -0.13
NUP98-219ENST00000532475 ARAP3Q8WWN8 1544 aa14.25□□□□□ -0.13
NUP98-219ENST00000532475 ARID4BQ4LE39 1312 aaPredicted RBP14.25□□□□□ -0.13
NUP98-219ENST00000532475 HSPA2P54652 639 aa14.24□□□□□ -0.13
NUP98-219ENST00000532475 ABCA8O94911 1581 aa14.24□□□□□ -0.13
NUP98-219ENST00000532475 CFAP43Q8NDM7 1665 aa14.23□□□□□ -0.13
NUP98-219ENST00000532475 ATP10BO94823 1461 aa14.21□□□□□ -0.13
NUP98-219ENST00000532475 ADAMTSL3P82987 1691 aa14.2□□□□□ -0.14
NUP98-219ENST00000532475 GOLGA3Q08378 1498 aa14.19□□□□□ -0.14
NUP98-219ENST00000532475 LMTK3Q96Q04 1460 aa14.18□□□□□ -0.14
NUP98-219ENST00000532475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.17□□□□□ -0.14
NUP98-219ENST00000532475 HNRNPUL2Q1KMD3 747 aaKnown RBP14.17□□□□□ -0.14
NUP98-219ENST00000532475 PHLDB1Q86UU1 1377 aa14.17□□□□□ -0.14
NUP98-219ENST00000532475 CERKQ8TCT0 537 aa14.15□□□□□ -0.14
NUP98-219ENST00000532475 PCF11O94913 1555 aaKnown RBP14.14□□□□□ -0.15
NUP98-219ENST00000532475 ILDR2Q71H61 639 aa14.14□□□□□ -0.15
NUP98-219ENST00000532475 FAM9AQ8IZU1 332 aaPredicted RBP14.14□□□□□ -0.15
NUP98-219ENST00000532475 MADDQ8WXG6 1647 aa14.12□□□□□ -0.15
NUP98-219ENST00000532475 PRXQ9BXM0 1461 aa14.11□□□□□ -0.15
NUP98-219ENST00000532475 MLECQ14165 292 aa14.1□□□□□ -0.15
NUP98-219ENST00000532475 ABCA9Q8IUA7 1624 aa14.1□□□□□ -0.15
NUP98-219ENST00000532475 NEO1Q92859 1461 aa14.1□□□□□ -0.15
NUP98-219ENST00000532475 BCORL1Q5H9F3 1711 aa14.1□□□□□ -0.15
NUP98-219ENST00000532475 RANGAP1P46060 587 aaPredicted RBP14.09□□□□□ -0.15
NUP98-219ENST00000532475 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
NUP98-219ENST00000532475 CTTNBP2Q8WZ74 1663 aa14.08□□□□□ -0.16
NUP98-219ENST00000532475 FRMPD1Q5SYB0 1578 aa14.07□□□□□ -0.16
NUP98-219ENST00000532475 PLEKHD1A6NEE1 506 aa14.05□□□□□ -0.16
NUP98-219ENST00000532475 DENND4BO75064 1496 aaPredicted RBP14.05□□□□□ -0.16
NUP98-219ENST00000532475 CEBPAP49715 358 aaPredicted RBP14.04□□□□□ -0.16
NUP98-219ENST00000532475 DISP3Q9P2K9 1392 aa14.04□□□□□ -0.16
NUP98-219ENST00000532475 AKNAQ7Z591 1439 aa14.04□□□□□ -0.16
NUP98-219ENST00000532475 YEATS2Q9ULM3 1422 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms