RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 CUL7Q14999 1698 aa32.43■■■□□ 2.78
SSSCA1-206ENST00000531405 KIF27Q86VH2 1401 aa32.38■■■□□ 2.77
SSSCA1-206ENST00000531405 IGF1RP08069 1367 aa32.38■■■□□ 2.77
SSSCA1-206ENST00000531405 ADCY10Q96PN6 1610 aa32.33■■■□□ 2.77
SSSCA1-206ENST00000531405 KIAA0586Q9BVV6 1533 aa32.32■■■□□ 2.76
SSSCA1-206ENST00000531405 AEBP2Q6ZN18 517 aaPredicted RBP32.26■■■□□ 2.75
SSSCA1-206ENST00000531405 MAPKBP1O60336 1514 aa32.22■■■□□ 2.75
SSSCA1-206ENST00000531405 ABCC10Q5T3U5 1492 aa32.19■■■□□ 2.74
SSSCA1-206ENST00000531405 NPM1P06748 294 aaKnown RBP eCLIP32.19■■■□□ 2.74
SSSCA1-206ENST00000531405 DIP2BQ9P265 1576 aa32.19■■■□□ 2.74
SSSCA1-206ENST00000531405 CARMIL1Q5VZK9 1371 aa32.17■■■□□ 2.74
SSSCA1-206ENST00000531405 FAM69CQ0P6D2 419 aa32.15■■■□□ 2.74
SSSCA1-206ENST00000531405 TSPOAP1O95153 1857 aa32.1■■■□□ 2.73
SSSCA1-206ENST00000531405 IQGAP2Q13576 1575 aa32.07■■■□□ 2.72
SSSCA1-206ENST00000531405 TTBK1Q5TCY1 1321 aaPredicted RBP32.04■■■□□ 2.72
SSSCA1-206ENST00000531405 PTPRGP23470 1445 aa32.04■■■□□ 2.72
SSSCA1-206ENST00000531405 CARMIL2Q6F5E8 1435 aa31.99■■■□□ 2.71
SSSCA1-206ENST00000531405 TNIKQ9UKE5 1360 aa31.97■■■□□ 2.71
SSSCA1-206ENST00000531405 KDM6BO15054 1643 aa31.93■■■□□ 2.7
SSSCA1-206ENST00000531405 ABCC2Q92887 1545 aa31.91■■■□□ 2.7
SSSCA1-206ENST00000531405 DISP1Q96F81 1524 aa31.9■■■□□ 2.7
SSSCA1-206ENST00000531405 RAPGEF2Q9Y4G8 1499 aa31.89■■■□□ 2.7
SSSCA1-206ENST00000531405 UGGT2Q9NYU1 1516 aa31.82■■■□□ 2.68
SSSCA1-206ENST00000531405 UHRF1BP1LA0JNW5 1464 aa31.82■■■□□ 2.68
SSSCA1-206ENST00000531405 ASXL2Q76L83 1435 aa31.82■■■□□ 2.68
SSSCA1-206ENST00000531405 PPRC1Q5VV67 1664 aaKnown RBP31.8■■■□□ 2.68
SSSCA1-206ENST00000531405 CTTNBP2Q8WZ74 1663 aa31.8■■■□□ 2.68
SSSCA1-206ENST00000531405 KIAA0556O60303 1618 aa31.8■■■□□ 2.68
SSSCA1-206ENST00000531405 UACAQ9BZF9 1416 aa31.8■■■□□ 2.68
SSSCA1-206ENST00000531405 PLB1Q6P1J6 1458 aa31.77■■■□□ 2.68
SSSCA1-206ENST00000531405 GLI2P10070 1586 aa31.75■■■□□ 2.67
SSSCA1-206ENST00000531405 ZCCHC11Q5TAX3 1644 aaKnown RBP31.74■■■□□ 2.67
SSSCA1-206ENST00000531405 KDM5BQ9UGL1 1544 aa31.7■■■□□ 2.66
SSSCA1-206ENST00000531405 MAP3K4Q9Y6R4 1608 aa31.64■■■□□ 2.66
SSSCA1-206ENST00000531405 EPRSP07814 1512 aaKnown RBP31.63■■■□□ 2.65
SSSCA1-206ENST00000531405 KDM4FA0A1W2PPD8 638 aa31.59■■■□□ 2.65
SSSCA1-206ENST00000531405 PRXQ9BXM0 1461 aa31.52■■■□□ 2.64
SSSCA1-206ENST00000531405 GOLGA3Q08378 1498 aa31.52■■■□□ 2.64
SSSCA1-206ENST00000531405 ABCA8O94911 1581 aa31.49■■■□□ 2.63
SSSCA1-206ENST00000531405 COL17A1Q9UMD9 1497 aaPredicted RBP31.49■■■□□ 2.63
SSSCA1-206ENST00000531405 WDR7Q9Y4E6 1490 aa31.49■■■□□ 2.63
SSSCA1-206ENST00000531405 TEX14Q8IWB6 1497 aa31.46■■■□□ 2.63
SSSCA1-206ENST00000531405 CFAP43Q8NDM7 1665 aa31.39■■■□□ 2.62
SSSCA1-206ENST00000531405 ADGRL1O94910 1474 aa31.36■■■□□ 2.61
SSSCA1-206ENST00000531405 KCNH8Q96L42 1107 aa31.32■■■□□ 2.6
SSSCA1-206ENST00000531405 P3H3Q8IVL6 736 aa31.29■■■□□ 2.6
SSSCA1-206ENST00000531405 CD109Q6YHK3 1445 aa31.29■■■□□ 2.6
SSSCA1-206ENST00000531405 MAGI3Q5TCQ9 1506 aa31.27■■■□□ 2.6
SSSCA1-206ENST00000531405 ARID3CA6NKF2 412 aa31.25■■■□□ 2.59
SSSCA1-206ENST00000531405 SAMD9Q5K651 1589 aa31.25■■■□□ 2.59
SSSCA1-206ENST00000531405 CSRNP3Q8WYN3 585 aa31.22■■■□□ 2.59
SSSCA1-206ENST00000531405 ATP10BO94823 1461 aa31.2■■■□□ 2.58
SSSCA1-206ENST00000531405 RAPGEF6Q8TEU7 1601 aa31.16■■■□□ 2.58
SSSCA1-206ENST00000531405 FAM9AQ8IZU1 332 aaPredicted RBP31.13■■■□□ 2.57
SSSCA1-206ENST00000531405 ABCA9Q8IUA7 1624 aa31.11■■■□□ 2.57
SSSCA1-206ENST00000531405 KIF21BO75037 1637 aa31.1■■■□□ 2.57
SSSCA1-206ENST00000531405 RANGAP1P46060 587 aaPredicted RBP31.06■■■□□ 2.56
SSSCA1-206ENST00000531405 EEA1Q15075 1411 aa31.06■■■□□ 2.56
SSSCA1-206ENST00000531405 ARAP3Q8WWN8 1544 aa31.03■■■□□ 2.56
SSSCA1-206ENST00000531405 FHOD3Q2V2M9 1422 aa31.01■■■□□ 2.55
SSSCA1-206ENST00000531405 NUP153P49790 1475 aaKnown RBP31.01■■■□□ 2.55
SSSCA1-206ENST00000531405 HECW2Q9P2P5 1572 aa31■■■□□ 2.55
SSSCA1-206ENST00000531405 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.97■■■□□ 2.55
SSSCA1-206ENST00000531405 HNRNPUL2Q1KMD3 747 aaKnown RBP30.97■■■□□ 2.55
SSSCA1-206ENST00000531405 NEO1Q92859 1461 aa30.89■■■□□ 2.53
SSSCA1-206ENST00000531405 PHLDB1Q86UU1 1377 aa30.88■■■□□ 2.53
SSSCA1-206ENST00000531405 FRMPD1Q5SYB0 1578 aa30.88■■■□□ 2.53
SSSCA1-206ENST00000531405 EFCAB5A4FU69 1503 aa30.87■■■□□ 2.53
SSSCA1-206ENST00000531405 RAPGEF3O95398 923 aa30.86■■■□□ 2.53
SSSCA1-206ENST00000531405 ADAMTSL3P82987 1691 aa30.8■■■□□ 2.52
SSSCA1-206ENST00000531405 RICTORQ6R327 1708 aa30.78■■■□□ 2.52
SSSCA1-206ENST00000531405 PLEKHD1A6NEE1 506 aa30.77■■■□□ 2.52
SSSCA1-206ENST00000531405 TTC37Q6PGP7 1564 aa30.77■■■□□ 2.52
SSSCA1-206ENST00000531405 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.77■■■□□ 2.52
SSSCA1-206ENST00000531405 EHMT2Q96KQ7 1210 aa30.75■■■□□ 2.51
SSSCA1-206ENST00000531405 CDK13Q14004 1512 aaKnown RBP30.74■■■□□ 2.51
SSSCA1-206ENST00000531405 BCORL1Q5H9F3 1711 aa30.74■■■□□ 2.51
SSSCA1-206ENST00000531405 ILDR1Q86SU0 546 aaPredicted RBP30.74■■■□□ 2.51
SSSCA1-206ENST00000531405 CFAP74Q9C0B2 1584 aa30.73■■■□□ 2.51
SSSCA1-206ENST00000531405 FANCAO15360 1455 aa30.7■■■□□ 2.5
SSSCA1-206ENST00000531405 ARHGEF40Q8TER5 1519 aa30.68■■■□□ 2.5
SSSCA1-206ENST00000531405 MADDQ8WXG6 1647 aa30.68■■■□□ 2.5
SSSCA1-206ENST00000531405 PTPRMP28827 1452 aa30.68■■■□□ 2.5
SSSCA1-206ENST00000531405 AKNAQ7Z591 1439 aa30.67■■■□□ 2.5
SSSCA1-206ENST00000531405 DENND4BO75064 1496 aaPredicted RBP30.67■■■□□ 2.5
SSSCA1-206ENST00000531405 UBTFP17480 764 aaKnown RBP30.64■■■□□ 2.5
SSSCA1-206ENST00000531405 ARID4BQ4LE39 1312 aaPredicted RBP30.63■■■□□ 2.49
SSSCA1-206ENST00000531405 HECW1Q76N89 1606 aa30.61■■■□□ 2.49
SSSCA1-206ENST00000531405 RIMS1Q86UR5 1692 aaKnown RBP30.6■■■□□ 2.49
SSSCA1-206ENST00000531405 SIGLEC1Q9BZZ2 1709 aa30.59■■■□□ 2.49
SSSCA1-206ENST00000531405 ARHGAP35Q9NRY4 1499 aa30.59■■■□□ 2.49
SSSCA1-206ENST00000531405 ZMYM4Q5VZL5 1548 aa30.57■■■□□ 2.49
SSSCA1-206ENST00000531405 CHIC1Q5VXU3 224 aa30.57■■■□□ 2.48
SSSCA1-206ENST00000531405 MYO5CQ9NQX4 1742 aa30.56■■■□□ 2.48
SSSCA1-206ENST00000531405 ATP1B4Q9UN42 357 aaPredicted RBP30.56■■■□□ 2.48
SSSCA1-206ENST00000531405 LRRIQ1Q96JM4 1722 aa30.56■■■□□ 2.48
SSSCA1-206ENST00000531405 FMN1Q68DA7 1419 aa30.55■■■□□ 2.48
SSSCA1-206ENST00000531405 ZFYVE16Q7Z3T8 1539 aa30.52■■■□□ 2.48
SSSCA1-206ENST00000531405 KIF14Q15058 1648 aa30.51■■■□□ 2.48
SSSCA1-206ENST00000531405 YEATS2Q9ULM3 1422 aa30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms