RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 GOLGA3Q08378 1498 aa27.8■■■□□ 2.04
SF3B2-211ENST00000531041 IQGAP2Q13576 1575 aa27.75■■■□□ 2.03
SF3B2-211ENST00000531041 SHROOM2Q13796 1616 aa27.74■■■□□ 2.03
SF3B2-211ENST00000531041 EHMT2Q96KQ7 1210 aa27.66■■■□□ 2.02
SF3B2-211ENST00000531041 UBTFP17480 764 aaKnown RBP27.64■■■□□ 2.02
SF3B2-211ENST00000531041 JPH4Q96JJ6 628 aa27.64■■■□□ 2.02
SF3B2-211ENST00000531041 DNAJC5Q9H3Z4 198 aa27.64■■■□□ 2.02
SF3B2-211ENST00000531041 UGGT2Q9NYU1 1516 aa27.6■■■□□ 2.01
SF3B2-211ENST00000531041 ARHGEF11O15085 1522 aa27.56■■■□□ 2
SF3B2-211ENST00000531041 RIMBP3CA6NJZ7 1639 aa27.55■■■□□ 2
SF3B2-211ENST00000531041 RIMBP3BA6NNM3 1639 aa27.55■■■□□ 2
SF3B2-211ENST00000531041 RIMBP3Q9UFD9 1639 aa27.55■■■□□ 2
SF3B2-211ENST00000531041 PRG4Q92954 1404 aaPredicted RBP27.55■■■□□ 2
SF3B2-211ENST00000531041 ERCC6L2Q5T890 1561 aa27.53■■■□□ 2
SF3B2-211ENST00000531041 TNIKQ9UKE5 1360 aa27.53■■■□□ 2
SF3B2-211ENST00000531041 LOC105371045A0A1W2PR82 267 aa27.51■■□□□ 1.99
SF3B2-211ENST00000531041 DISP1Q96F81 1524 aa27.49■■□□□ 1.99
SF3B2-211ENST00000531041 CARMIL2Q6F5E8 1435 aa27.48■■□□□ 1.99
SF3B2-211ENST00000531041 KIAA0556O60303 1618 aa27.47■■□□□ 1.99
SF3B2-211ENST00000531041 SAMD9Q5K651 1589 aa27.47■■□□□ 1.99
SF3B2-211ENST00000531041 EFCAB5A4FU69 1503 aa27.42■■□□□ 1.98
SF3B2-211ENST00000531041 RANGAP1P46060 587 aaPredicted RBP27.37■■□□□ 1.97
SF3B2-211ENST00000531041 ARAP1Q96P48 1450 aa27.36■■□□□ 1.97
SF3B2-211ENST00000531041 ARHGAP35Q9NRY4 1499 aa27.32■■□□□ 1.96
SF3B2-211ENST00000531041 CLIP1P30622 1438 aa27.29■■□□□ 1.96
SF3B2-211ENST00000531041 CEP162Q5TB80 1403 aa27.28■■□□□ 1.96
SF3B2-211ENST00000531041 P3H3Q8IVL6 736 aa27.28■■□□□ 1.96
SF3B2-211ENST00000531041 PTPRGP23470 1445 aa27.27■■□□□ 1.96
SF3B2-211ENST00000531041 FHOD3Q2V2M9 1422 aa27.24■■□□□ 1.95
SF3B2-211ENST00000531041 CYB5RLQ6IPT4 315 aa27.24■■□□□ 1.95
SF3B2-211ENST00000531041 TTBK1Q5TCY1 1321 aaPredicted RBP27.19■■□□□ 1.94
SF3B2-211ENST00000531041 ABCA8O94911 1581 aa27.14■■□□□ 1.94
SF3B2-211ENST00000531041 ADCY10Q96PN6 1610 aa27.13■■□□□ 1.93
SF3B2-211ENST00000531041 FMN1Q68DA7 1419 aa27.12■■□□□ 1.93
SF3B2-211ENST00000531041 UACAQ9BZF9 1416 aa27.12■■□□□ 1.93
SF3B2-211ENST00000531041 PLB1Q6P1J6 1458 aa27.11■■□□□ 1.93
SF3B2-211ENST00000531041 RAPGEF6Q8TEU7 1601 aa27.11■■□□□ 1.93
SF3B2-211ENST00000531041 ABCC2Q92887 1545 aa27.1■■□□□ 1.93
SF3B2-211ENST00000531041 UHRF1BP1LA0JNW5 1464 aa27.1■■□□□ 1.93
SF3B2-211ENST00000531041 PCF11O94913 1555 aaKnown RBP26.99■■□□□ 1.91
SF3B2-211ENST00000531041 HECW1Q76N89 1606 aa26.98■■□□□ 1.91
SF3B2-211ENST00000531041 KDM5BQ9UGL1 1544 aa26.98■■□□□ 1.91
SF3B2-211ENST00000531041 CASKIN1Q8WXD9 1431 aa26.96■■□□□ 1.91
SF3B2-211ENST00000531041 NUP153P49790 1475 aaKnown RBP26.96■■□□□ 1.91
SF3B2-211ENST00000531041 ZCCHC11Q5TAX3 1644 aaKnown RBP26.96■■□□□ 1.91
SF3B2-211ENST00000531041 LRRIQ1Q96JM4 1722 aa26.95■■□□□ 1.9
SF3B2-211ENST00000531041 VPS8Q8N3P4 1428 aa26.94■■□□□ 1.9
SF3B2-211ENST00000531041 FYCO1Q9BQS8 1478 aa26.94■■□□□ 1.9
SF3B2-211ENST00000531041 NPM1P06748 294 aaKnown RBP eCLIP26.91■■□□□ 1.9
SF3B2-211ENST00000531041 ATP10BO94823 1461 aa26.89■■□□□ 1.9
SF3B2-211ENST00000531041 EPRSP07814 1512 aaKnown RBP26.86■■□□□ 1.89
SF3B2-211ENST00000531041 MAPKBP1O60336 1514 aa26.86■■□□□ 1.89
SF3B2-211ENST00000531041 ATP1B4Q9UN42 357 aaPredicted RBP26.85■■□□□ 1.89
SF3B2-211ENST00000531041 CCDC18Q5T9S5 1454 aa26.82■■□□□ 1.88
SF3B2-211ENST00000531041 CDK13Q14004 1512 aaKnown RBP26.82■■□□□ 1.88
SF3B2-211ENST00000531041 ARID3CA6NKF2 412 aa26.81■■□□□ 1.88
SF3B2-211ENST00000531041 ASXL2Q76L83 1435 aa26.76■■□□□ 1.87
SF3B2-211ENST00000531041 CFAP43Q8NDM7 1665 aa26.75■■□□□ 1.87
SF3B2-211ENST00000531041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.74■■□□□ 1.87
SF3B2-211ENST00000531041 HNRNPUL2Q1KMD3 747 aaKnown RBP26.74■■□□□ 1.87
SF3B2-211ENST00000531041 WDR7Q9Y4E6 1490 aa26.72■■□□□ 1.87
SF3B2-211ENST00000531041 MAP3K1Q13233 1512 aa26.7■■□□□ 1.86
SF3B2-211ENST00000531041 TIAM1Q13009 1591 aa26.69■■□□□ 1.86
SF3B2-211ENST00000531041 CDK11AQ9UQ88 783 aaPredicted RBP26.68■■□□□ 1.86
SF3B2-211ENST00000531041 KIF13AQ9H1H9 1805 aa26.68■■□□□ 1.86
SF3B2-211ENST00000531041 PLEKHD1A6NEE1 506 aa26.67■■□□□ 1.86
SF3B2-211ENST00000531041 DIP2BQ9P265 1576 aa26.65■■□□□ 1.86
SF3B2-211ENST00000531041 ABCC10Q5T3U5 1492 aa26.64■■□□□ 1.85
SF3B2-211ENST00000531041 MAGI3Q5TCQ9 1506 aa26.63■■□□□ 1.85
SF3B2-211ENST00000531041 TROQ12816 1431 aaPredicted RBP26.61■■□□□ 1.85
SF3B2-211ENST00000531041 GLI2P10070 1586 aa26.6■■□□□ 1.85
SF3B2-211ENST00000531041 APLP2Q06481 763 aa26.59■■□□□ 1.85
SF3B2-211ENST00000531041 KCNH8Q96L42 1107 aa26.56■■□□□ 1.84
SF3B2-211ENST00000531041 EHBP1L1Q8N3D4 1523 aa26.56■■□□□ 1.84
SF3B2-211ENST00000531041 KIF14Q15058 1648 aa26.56■■□□□ 1.84
SF3B2-211ENST00000531041 ABCA9Q8IUA7 1624 aa26.55■■□□□ 1.84
SF3B2-211ENST00000531041 MTUS2Q5JR59 1369 aa26.55■■□□□ 1.84
SF3B2-211ENST00000531041 LRRC9Q6ZRR7 1453 aa26.54■■□□□ 1.84
SF3B2-211ENST00000531041 MAP3K4Q9Y6R4 1608 aa26.53■■□□□ 1.84
SF3B2-211ENST00000531041 FAM69CQ0P6D2 419 aa26.52■■□□□ 1.84
SF3B2-211ENST00000531041 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.51■■□□□ 1.83
SF3B2-211ENST00000531041 TRHP20396 242 aaPredicted RBP26.5■■□□□ 1.83
SF3B2-211ENST00000531041 SUPT6HQ7KZ85 1726 aaKnown RBP26.49■■□□□ 1.83
SF3B2-211ENST00000531041 TTC37Q6PGP7 1564 aa26.48■■□□□ 1.83
SF3B2-211ENST00000531041 KANK4Q5T7N3 995 aaPredicted RBP26.48■■□□□ 1.83
SF3B2-211ENST00000531041 TSPOAP1O95153 1857 aa26.47■■□□□ 1.83
SF3B2-211ENST00000531041 MYO5CQ9NQX4 1742 aa26.45■■□□□ 1.82
SF3B2-211ENST00000531041 CDC42BPAQ5VT25 1732 aa26.42■■□□□ 1.82
SF3B2-211ENST00000531041 PPRC1Q5VV67 1664 aaKnown RBP26.42■■□□□ 1.82
SF3B2-211ENST00000531041 CD109Q6YHK3 1445 aa26.41■■□□□ 1.82
SF3B2-211ENST00000531041 NCOA2Q15596 1464 aa26.38■■□□□ 1.81
SF3B2-211ENST00000531041 CDC42BPBQ9Y5S2 1711 aa26.37■■□□□ 1.81
SF3B2-211ENST00000531041 PREX2Q70Z35 1606 aa26.37■■□□□ 1.81
SF3B2-211ENST00000531041 ITSN2Q9NZM3 1697 aa26.36■■□□□ 1.81
SF3B2-211ENST00000531041 ARAP3Q8WWN8 1544 aa26.35■■□□□ 1.81
SF3B2-211ENST00000531041 PLCH2O75038 1416 aa26.33■■□□□ 1.81
SF3B2-211ENST00000531041 GPATCH8Q9UKJ3 1502 aaKnown RBP26.32■■□□□ 1.8
SF3B2-211ENST00000531041 TEX14Q8IWB6 1497 aa26.31■■□□□ 1.8
SF3B2-211ENST00000531041 CCNB3Q8WWL7 1395 aa26.3■■□□□ 1.8
SF3B2-211ENST00000531041 CFAP74Q9C0B2 1584 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms