RNA–Protein interactions for RNA: ENST00000530262.5

MACF1-229, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 6,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-229ENST00000530262 SENP3Q9H4L4 574 aaPredicted RBP9.85□□□□□ -0.83
MACF1-229ENST00000530262 ANP32BQ92688 251 aaKnown RBP9.85□□□□□ -0.83
MACF1-229ENST00000530262 STAG3Q9UJ98 1225 aa9.84□□□□□ -0.83
MACF1-229ENST00000530262 UPF2Q9HAU5 1272 aaKnown RBP9.84□□□□□ -0.83
MACF1-229ENST00000530262 FKBP8Q14318 412 aa9.83□□□□□ -0.84
MACF1-229ENST00000530262 PLEKHD1A6NEE1 506 aa9.83□□□□□ -0.84
MACF1-229ENST00000530262 NPM2Q86SE8 214 aaKnown RBP9.83□□□□□ -0.84
MACF1-229ENST00000530262 CEP164Q9UPV0 1460 aa9.83□□□□□ -0.84
MACF1-229ENST00000530262 CARMIL1Q5VZK9 1371 aa9.82□□□□□ -0.84
MACF1-229ENST00000530262 EEA1Q15075 1411 aa9.8□□□□□ -0.84
MACF1-229ENST00000530262 CEP162Q5TB80 1403 aa9.8□□□□□ -0.84
MACF1-229ENST00000530262 HNRNPUQ00839 825 aaKnown RBP eCLIP9.8□□□□□ -0.84
MACF1-229ENST00000530262 BCL11AQ9H165 835 aa9.8□□□□□ -0.84
MACF1-229ENST00000530262 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.8□□□□□ -0.84
MACF1-229ENST00000530262 TSPY4P0CV99 314 aa9.8□□□□□ -0.84
MACF1-229ENST00000530262 TSPY10P0CW01 314 aa9.8□□□□□ -0.84
MACF1-229ENST00000530262 FANCD2Q9BXW9 1451 aa9.79□□□□□ -0.84
MACF1-229ENST00000530262 HSP90AA1P07900 732 aaKnown RBP9.79□□□□□ -0.84
MACF1-229ENST00000530262 ARID4BQ4LE39 1312 aaPredicted RBP9.78□□□□□ -0.84
MACF1-229ENST00000530262 RRP7BPQ9NSQ0 103 aa9.77□□□□□ -0.85
MACF1-229ENST00000530262 CC2D2AQ9P2K1 1620 aa9.77□□□□□ -0.85
MACF1-229ENST00000530262 DDX10Q13206 875 aaKnown RBP9.76□□□□□ -0.85
MACF1-229ENST00000530262 FAM9BQ8IZU0 186 aa9.76□□□□□ -0.85
MACF1-229ENST00000530262 DNAJC5BQ9UF47 199 aa9.76□□□□□ -0.85
MACF1-229ENST00000530262 TMC1Q8TDI8 760 aa9.74□□□□□ -0.85
MACF1-229ENST00000530262 WDR43Q15061 677 aaKnown RBP eCLIP9.73□□□□□ -0.85
MACF1-229ENST00000530262 CFDP1Q9UEE9 299 aaPredicted RBP9.73□□□□□ -0.85
MACF1-229ENST00000530262 CCDC136Q96JN2 1154 aa9.73□□□□□ -0.85
MACF1-229ENST00000530262 NESP48681 1621 aa9.72□□□□□ -0.85
MACF1-229ENST00000530262 TNIKQ9UKE5 1360 aa9.7□□□□□ -0.86
MACF1-229ENST00000530262 KDM2AQ9Y2K7 1162 aa9.69□□□□□ -0.86
MACF1-229ENST00000530262 NCAPD3P42695 1498 aa9.69□□□□□ -0.86
MACF1-229ENST00000530262 MRS2Q9HD23 443 aa9.69□□□□□ -0.86
MACF1-229ENST00000530262 GLIPR1L2Q4G1C9 344 aa9.69□□□□□ -0.86
MACF1-229ENST00000530262 MLECQ14165 292 aa9.68□□□□□ -0.86
MACF1-229ENST00000530262 RAD54L2Q9Y4B4 1467 aa9.67□□□□□ -0.86
MACF1-229ENST00000530262 EIF4G2P78344 907 aaKnown RBP eCLIP9.66□□□□□ -0.86
MACF1-229ENST00000530262 CARMIL2Q6F5E8 1435 aa9.66□□□□□ -0.86
MACF1-229ENST00000530262 CYB5RLQ6IPT4 315 aa9.66□□□□□ -0.86
MACF1-229ENST00000530262 BICRAQ9NZM4 1560 aa9.65□□□□□ -0.86
MACF1-229ENST00000530262 EIF5BO60841 1220 aaKnown RBP9.65□□□□□ -0.86
MACF1-229ENST00000530262 DDRGK1Q96HY6 314 aa9.65□□□□□ -0.86
MACF1-229ENST00000530262 MYH16Q9H6N6 1097 aa9.65□□□□□ -0.86
MACF1-229ENST00000530262 PLEKHG5O94827 1062 aa9.65□□□□□ -0.87
MACF1-229ENST00000530262 SALL2Q9Y467 1007 aaPredicted RBP9.64□□□□□ -0.87
MACF1-229ENST00000530262 FGD5Q6ZNL6 1462 aa9.64□□□□□ -0.87
MACF1-229ENST00000530262 CCNB3Q8WWL7 1395 aa9.63□□□□□ -0.87
MACF1-229ENST00000530262 RUSC2Q8N2Y8 1516 aa9.63□□□□□ -0.87
MACF1-229ENST00000530262 JPH4Q96JJ6 628 aa9.63□□□□□ -0.87
MACF1-229ENST00000530262 PPP1R15AO75807 674 aaPredicted RBP9.62□□□□□ -0.87
MACF1-229ENST00000530262 AQRO60306 1485 aaKnown RBP eCLIP9.62□□□□□ -0.871e-6■■■■□ 24.7
MACF1-229ENST00000530262 RGL3Q3MIN7 710 aa9.62□□□□□ -0.87
MACF1-229ENST00000530262 OSCARQ8IYS5 282 aa9.62□□□□□ -0.87
MACF1-229ENST00000530262 MIER1Q8N108 512 aa9.62□□□□□ -0.87
MACF1-229ENST00000530262 BECN1Q14457 450 aa9.61□□□□□ -0.87
MACF1-229ENST00000530262 NBR1Q14596 966 aa9.61□□□□□ -0.87
MACF1-229ENST00000530262 ANP32EQ9BTT0 268 aa9.6□□□□□ -0.87
MACF1-229ENST00000530262 FHAD1B1AJZ9 1412 aa9.6□□□□□ -0.87
MACF1-229ENST00000530262 RAPGEF2Q9Y4G8 1499 aa9.6□□□□□ -0.87
MACF1-229ENST00000530262 FHOD3Q2V2M9 1422 aa9.6□□□□□ -0.87
MACF1-229ENST00000530262 SCAF1Q9H7N4 1312 aaKnown RBP9.6□□□□□ -0.87
MACF1-229ENST00000530262 GAPVD1Q14C86 1478 aa9.58□□□□□ -0.88
MACF1-229ENST00000530262 CDCA8Q53HL2 280 aa9.58□□□□□ -0.88
MACF1-229ENST00000530262 UNC13AQ9UPW8 1703 aa9.58□□□□□ -0.88
MACF1-229ENST00000530262 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
MACF1-229ENST00000530262 HIRIP3Q9BW71 556 aaPredicted RBP9.57□□□□□ -0.88
MACF1-229ENST00000530262 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
MACF1-229ENST00000530262 CFAP53Q96M91 514 aa9.55□□□□□ -0.88
MACF1-229ENST00000530262 NCLP19338 710 aaKnown RBP9.55□□□□□ -0.88
MACF1-229ENST00000530262 GGT6Q6P531 493 aa9.55□□□□□ -0.88
MACF1-229ENST00000530262 GOLGA6L22H0YM25 854 aa9.54□□□□□ -0.88
MACF1-229ENST00000530262 MRC2Q9UBG0 1479 aa9.54□□□□□ -0.88
MACF1-229ENST00000530262 IRX6P78412 446 aaPredicted RBP9.53□□□□□ -0.88
MACF1-229ENST00000530262 HMGXB3Q12766 1538 aa9.53□□□□□ -0.88
MACF1-229ENST00000530262 CFTRP13569 1480 aa9.53□□□□□ -0.88
MACF1-229ENST00000530262 ZBTB7CA1YPR0 619 aa9.53□□□□□ -0.88
MACF1-229ENST00000530262 CASC1Q6TDU7 716 aa9.52□□□□□ -0.89
MACF1-229ENST00000530262 FMN1Q68DA7 1419 aa9.51□□□□□ -0.89
MACF1-229ENST00000530262 KNSTRNQ9Y448 316 aa9.51□□□□□ -0.89
MACF1-229ENST00000530262 PTPRGP23470 1445 aa9.51□□□□□ -0.89
MACF1-229ENST00000530262 TRIM44Q96DX7 344 aaPredicted RBP9.51□□□□□ -0.89
MACF1-229ENST00000530262 VPS8Q8N3P4 1428 aa9.5□□□□□ -0.89
MACF1-229ENST00000530262 HNRNPMP52272 730 aaKnown RBP eCLIP9.5□□□□□ -0.89
MACF1-229ENST00000530262 ARXQ96QS3 562 aa9.5□□□□□ -0.89
MACF1-229ENST00000530262 CDK11BP21127 795 aaKnown RBP9.5□□□□□ -0.89
MACF1-229ENST00000530262 IGF1RP08069 1367 aa9.5□□□□□ -0.89
MACF1-229ENST00000530262 PPM1GO15355 546 aaPredicted RBP9.49□□□□□ -0.89
MACF1-229ENST00000530262 ARHGAP35Q9NRY4 1499 aa9.49□□□□□ -0.89
MACF1-229ENST00000530262 EFCAB2Q5VUJ9 269 aa9.49□□□□□ -0.89
MACF1-229ENST00000530262 CARD11Q9BXL7 1154 aa9.48□□□□□ -0.89
MACF1-229ENST00000530262 CHMP4BQ9H444 224 aaKnown RBP9.47□□□□□ -0.89
MACF1-229ENST00000530262 TOPBP1Q92547 1522 aa9.47□□□□□ -0.89
MACF1-229ENST00000530262 PPP4R2Q9NY27 417 aa9.47□□□□□ -0.89
MACF1-229ENST00000530262 A0A0G2JS52 829 aa9.46□□□□□ -0.89
MACF1-229ENST00000530262 SIN3AQ96ST3 1273 aa9.46□□□□□ -0.89
MACF1-229ENST00000530262 FOXD1Q16676 465 aa9.46□□□□□ -0.89
MACF1-229ENST00000530262 FTSJ3Q8IY81 847 aaKnown RBP9.46□□□□□ -0.89
MACF1-229ENST00000530262 SYNJ1O43426 1573 aa9.46□□□□□ -0.89
MACF1-229ENST00000530262 MS4A1P11836 297 aa9.45□□□□□ -0.9
MACF1-229ENST00000530262 GRIN2BQ13224 1484 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms