RNA–Protein interactions for RNA: ENST00000529846.5

PUM1-220, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 3

Gene PUM1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-220ENST00000529846 FAM9AQ8IZU1 332 aaPredicted RBP8.71□□□□□ -1.02
PUM1-220ENST00000529846 ADAMTS12P58397 1594 aa8.7□□□□□ -1.02
PUM1-220ENST00000529846 NUP160Q12769 1436 aa8.69□□□□□ -1.02
PUM1-220ENST00000529846 PRXQ9BXM0 1461 aa8.69□□□□□ -1.02
PUM1-220ENST00000529846 KIAA0586Q9BVV6 1533 aa8.67□□□□□ -1.02
PUM1-220ENST00000529846 JPH4Q96JJ6 628 aa8.65□□□□□ -1.02
PUM1-220ENST00000529846 RUSC2Q8N2Y8 1516 aa8.64□□□□□ -1.03
PUM1-220ENST00000529846 MSH5O43196 834 aa8.64□□□□□ -1.03
PUM1-220ENST00000529846 CHD1O14646 1710 aa8.63□□□□□ -1.03
PUM1-220ENST00000529846 CARMIL2Q6F5E8 1435 aa8.63□□□□□ -1.03
PUM1-220ENST00000529846 CLASP1Q7Z460 1538 aa8.62□□□□□ -1.03
PUM1-220ENST00000529846 KIF21BO75037 1637 aa8.62□□□□□ -1.03
PUM1-220ENST00000529846 GOLGA3Q08378 1498 aa8.61□□□□□ -1.03
PUM1-220ENST00000529846 UBTFP17480 764 aaKnown RBP8.59□□□□□ -1.03
PUM1-220ENST00000529846 CEP170Q5SW79 1584 aa8.59□□□□□ -1.03
PUM1-220ENST00000529846 IQGAP2Q13576 1575 aa8.57□□□□□ -1.04
PUM1-220ENST00000529846 PRG4Q92954 1404 aaPredicted RBP8.57□□□□□ -1.04
PUM1-220ENST00000529846 SHROOM2Q13796 1616 aa8.57□□□□□ -1.04
PUM1-220ENST00000529846 UGGT2Q9NYU1 1516 aa8.56□□□□□ -1.04
PUM1-220ENST00000529846 ARHGEF11O15085 1522 aa8.55□□□□□ -1.04
PUM1-220ENST00000529846 TNIKQ9UKE5 1360 aa8.55□□□□□ -1.04
PUM1-220ENST00000529846 PTPRGP23470 1445 aa8.53□□□□□ -1.04
PUM1-220ENST00000529846 NPM1P06748 294 aaKnown RBP eCLIP8.52□□□□□ -1.05
PUM1-220ENST00000529846 NCBP3Q53F19 620 aaKnown RBP8.52□□□□□ -1.05
PUM1-220ENST00000529846 EFCAB5A4FU69 1503 aa8.52□□□□□ -1.05
PUM1-220ENST00000529846 CTTNBP2Q8WZ74 1663 aa8.51□□□□□ -1.05
PUM1-220ENST00000529846 CYB5RLQ6IPT4 315 aa8.51□□□□□ -1.05
PUM1-220ENST00000529846 RIMBP3CA6NJZ7 1639 aa8.5□□□□□ -1.05
PUM1-220ENST00000529846 RIMBP3BA6NNM3 1639 aa8.5□□□□□ -1.05
PUM1-220ENST00000529846 RIMBP3Q9UFD9 1639 aa8.5□□□□□ -1.05
PUM1-220ENST00000529846 DISP1Q96F81 1524 aa8.49□□□□□ -1.05
PUM1-220ENST00000529846 FMN1Q68DA7 1419 aa8.48□□□□□ -1.05
PUM1-220ENST00000529846 NPM3O75607 178 aaKnown RBP8.48□□□□□ -1.05
PUM1-220ENST00000529846 UACAQ9BZF9 1416 aa8.47□□□□□ -1.05
PUM1-220ENST00000529846 UHRF1BP1LA0JNW5 1464 aa8.47□□□□□ -1.05
PUM1-220ENST00000529846 ARAP1Q96P48 1450 aa8.46□□□□□ -1.05
PUM1-220ENST00000529846 EHMT2Q96KQ7 1210 aa8.46□□□□□ -1.06
PUM1-220ENST00000529846 KIAA0556O60303 1618 aa8.46□□□□□ -1.06
PUM1-220ENST00000529846 SAMD9Q5K651 1589 aa8.45□□□□□ -1.06
PUM1-220ENST00000529846 SCAF1Q9H7N4 1312 aaKnown RBP8.45□□□□□ -1.06
PUM1-220ENST00000529846 CDK11AQ9UQ88 783 aaPredicted RBP8.44□□□□□ -1.06
PUM1-220ENST00000529846 CLIP1P30622 1438 aa8.44□□□□□ -1.06
PUM1-220ENST00000529846 MAPK8IP2Q13387 824 aaPredicted RBP8.43□□□□□ -1.06
PUM1-220ENST00000529846 CNKSR2Q8WXI2 1034 aa8.43□□□□□ -1.06
PUM1-220ENST00000529846 ERCC6L2Q5T890 1561 aa8.41□□□□□ -1.06
PUM1-220ENST00000529846 ABCC2Q92887 1545 aa8.41□□□□□ -1.06
PUM1-220ENST00000529846 LOC105371045A0A1W2PR82 267 aa8.41□□□□□ -1.06
PUM1-220ENST00000529846 SLC4A1APQ9BWU0 796 aaKnown RBP8.41□□□□□ -1.06
PUM1-220ENST00000529846 ARHGAP35Q9NRY4 1499 aa8.4□□□□□ -1.06
PUM1-220ENST00000529846 CEP162Q5TB80 1403 aa8.4□□□□□ -1.06
PUM1-220ENST00000529846 RANGAP1P46060 587 aaPredicted RBP8.4□□□□□ -1.06
PUM1-220ENST00000529846 P3H3Q8IVL6 736 aa8.4□□□□□ -1.06
PUM1-220ENST00000529846 KDM5BQ9UGL1 1544 aa8.39□□□□□ -1.07
PUM1-220ENST00000529846 PLB1Q6P1J6 1458 aa8.39□□□□□ -1.07
PUM1-220ENST00000529846 CASKIN1Q8WXD9 1431 aa8.38□□□□□ -1.07
PUM1-220ENST00000529846 PLEKHD1A6NEE1 506 aa8.38□□□□□ -1.07
PUM1-220ENST00000529846 ABCA8O94911 1581 aa8.38□□□□□ -1.07
PUM1-220ENST00000529846 MAPKBP1O60336 1514 aa8.38□□□□□ -1.07
PUM1-220ENST00000529846 FHOD3Q2V2M9 1422 aa8.37□□□□□ -1.07
PUM1-220ENST00000529846 TTBK1Q5TCY1 1321 aaPredicted RBP8.37□□□□□ -1.07
PUM1-220ENST00000529846 CCDC18Q5T9S5 1454 aa8.36□□□□□ -1.07
PUM1-220ENST00000529846 FYCO1Q9BQS8 1478 aa8.35□□□□□ -1.07
PUM1-220ENST00000529846 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.35□□□□□ -1.07
PUM1-220ENST00000529846 APLP2Q06481 763 aa8.35□□□□□ -1.07
PUM1-220ENST00000529846 HNRNPUL2Q1KMD3 747 aaKnown RBP8.35□□□□□ -1.07
PUM1-220ENST00000529846 RAPGEF6Q8TEU7 1601 aa8.35□□□□□ -1.07
PUM1-220ENST00000529846 ADCY10Q96PN6 1610 aa8.35□□□□□ -1.07
PUM1-220ENST00000529846 ATP10BO94823 1461 aa8.33□□□□□ -1.08
PUM1-220ENST00000529846 HECW1Q76N89 1606 aa8.33□□□□□ -1.08
PUM1-220ENST00000529846 VPS8Q8N3P4 1428 aa8.33□□□□□ -1.08
PUM1-220ENST00000529846 ATP1B4Q9UN42 357 aaPredicted RBP8.33□□□□□ -1.08
PUM1-220ENST00000529846 NUP153P49790 1475 aaKnown RBP8.32□□□□□ -1.08
PUM1-220ENST00000529846 ABCC10Q5T3U5 1492 aa8.32□□□□□ -1.08
PUM1-220ENST00000529846 ASXL2Q76L83 1435 aa8.32□□□□□ -1.08
PUM1-220ENST00000529846 MAP3K1Q13233 1512 aa8.32□□□□□ -1.08
PUM1-220ENST00000529846 PHLDB1Q86UU1 1377 aa8.32□□□□□ -1.08
PUM1-220ENST00000529846 WDR7Q9Y4E6 1490 aa8.32□□□□□ -1.08
PUM1-220ENST00000529846 EPRSP07814 1512 aaKnown RBP8.31□□□□□ -1.08
PUM1-220ENST00000529846 TRHP20396 242 aaPredicted RBP8.31□□□□□ -1.08
PUM1-220ENST00000529846 FAM69CQ0P6D2 419 aa8.31□□□□□ -1.08
PUM1-220ENST00000529846 GLI2P10070 1586 aa8.3□□□□□ -1.08
PUM1-220ENST00000529846 ZCCHC11Q5TAX3 1644 aaKnown RBP8.29□□□□□ -1.08
PUM1-220ENST00000529846 TEX14Q8IWB6 1497 aa8.27□□□□□ -1.09
PUM1-220ENST00000529846 KCNH8Q96L42 1107 aa8.27□□□□□ -1.09
PUM1-220ENST00000529846 TROQ12816 1431 aaPredicted RBP8.27□□□□□ -1.09
PUM1-220ENST00000529846 MTUS2Q5JR59 1369 aa8.26□□□□□ -1.09
PUM1-220ENST00000529846 CD109Q6YHK3 1445 aa8.25□□□□□ -1.09
PUM1-220ENST00000529846 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
PUM1-220ENST00000529846 MAGI3Q5TCQ9 1506 aa8.24□□□□□ -1.09
PUM1-220ENST00000529846 EFCAB2Q5VUJ9 269 aa8.24□□□□□ -1.09
PUM1-220ENST00000529846 ARAP3Q8WWN8 1544 aa8.24□□□□□ -1.09
PUM1-220ENST00000529846 PCF11O94913 1555 aaKnown RBP8.23□□□□□ -1.09
PUM1-220ENST00000529846 ARID3CA6NKF2 412 aa8.23□□□□□ -1.09
PUM1-220ENST00000529846 RSPH4AQ5TD94 716 aa8.23□□□□□ -1.09
PUM1-220ENST00000529846 DIP2BQ9P265 1576 aa8.22□□□□□ -1.09
PUM1-220ENST00000529846 PLCH2O75038 1416 aa8.22□□□□□ -1.09
PUM1-220ENST00000529846 RNF216Q9NWF9 866 aaPredicted RBP8.22□□□□□ -1.09
PUM1-220ENST00000529846 DMRT2Q9Y5R5 561 aa8.22□□□□□ -1.09
PUM1-220ENST00000529846 ABCA9Q8IUA7 1624 aa8.21□□□□□ -1.09
PUM1-220ENST00000529846 NEO1Q92859 1461 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms