RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	RUSC2	Q8N2Y8	1516 aa		20.1	■□□□□ 0.81
PSMC3-205	ENST00000528362	PRG4	Q92954	1404 aa	Predicted RBP	20.08	■□□□□ 0.8
PSMC3-205	ENST00000528362	KIAA0586	Q9BVV6	1533 aa		20.06	■□□□□ 0.8
PSMC3-205	ENST00000528362	RAPGEF2	Q9Y4G8	1499 aa		19.98	■□□□□ 0.79
PSMC3-205	ENST00000528362	TRH	P20396	242 aa	Predicted RBP	19.95	■□□□□ 0.78
PSMC3-205	ENST00000528362	PRX	Q9BXM0	1461 aa		19.89	■□□□□ 0.77
PSMC3-205	ENST00000528362	IQGAP2	Q13576	1575 aa		19.88	■□□□□ 0.77
PSMC3-205	ENST00000528362	CARMIL2	Q6F5E8	1435 aa		19.83	■□□□□ 0.76
PSMC3-205	ENST00000528362	PTPRG	P23470	1445 aa		19.81	■□□□□ 0.76
PSMC3-205	ENST00000528362	TNIK	Q9UKE5	1360 aa		19.81	■□□□□ 0.76
PSMC3-205	ENST00000528362	DISP1	Q96F81	1524 aa		19.81	■□□□□ 0.76
PSMC3-205	ENST00000528362	CSRNP3	Q8WYN3	585 aa		19.8	■□□□□ 0.76
PSMC3-205	ENST00000528362	UGGT2	Q9NYU1	1516 aa		19.8	■□□□□ 0.76
PSMC3-205	ENST00000528362	CHIC1	Q5VXU3	224 aa		19.78	■□□□□ 0.76
PSMC3-205	ENST00000528362	EEA1	Q15075	1411 aa		19.77	■□□□□ 0.76
PSMC3-205	ENST00000528362	ADCY10	Q96PN6	1610 aa		19.76	■□□□□ 0.75
PSMC3-205	ENST00000528362	TTBK1	Q5TCY1	1321 aa	Predicted RBP	19.76	■□□□□ 0.75
PSMC3-205	ENST00000528362	NPM1	P06748	294 aa	Known RBP eCLIP	19.71	■□□□□ 0.75
PSMC3-205	ENST00000528362	KIAA0556	O60303	1618 aa		19.7	■□□□□ 0.74
PSMC3-205	ENST00000528362	FAM9A	Q8IZU1	332 aa	Predicted RBP	19.7	■□□□□ 0.74
PSMC3-205	ENST00000528362	MAPKBP1	O60336	1514 aa		19.69	■□□□□ 0.74
PSMC3-205	ENST00000528362	UACA	Q9BZF9	1416 aa		19.67	■□□□□ 0.74
PSMC3-205	ENST00000528362	CTTNBP2	Q8WZ74	1663 aa		19.66	■□□□□ 0.74
PSMC3-205	ENST00000528362	UHRF1BP1L	A0JNW5	1464 aa		19.66	■□□□□ 0.74
PSMC3-205	ENST00000528362	GOLGA3	Q08378	1498 aa		19.66	■□□□□ 0.74
PSMC3-205	ENST00000528362	ABCC2	Q92887	1545 aa		19.66	■□□□□ 0.74
PSMC3-205	ENST00000528362	ABCC10	Q5T3U5	1492 aa		19.64	■□□□□ 0.73
PSMC3-205	ENST00000528362	FAM69C	Q0P6D2	419 aa		19.61	■□□□□ 0.73
PSMC3-205	ENST00000528362	PLB1	Q6P1J6	1458 aa		19.58	■□□□□ 0.72
PSMC3-205	ENST00000528362	DIP2B	Q9P265	1576 aa		19.57	■□□□□ 0.72
PSMC3-205	ENST00000528362	KDM5B	Q9UGL1	1544 aa		19.56	■□□□□ 0.72
PSMC3-205	ENST00000528362	ASXL2	Q76L83	1435 aa		19.56	■□□□□ 0.72
PSMC3-205	ENST00000528362	KIF21B	O75037	1637 aa		19.55	■□□□□ 0.72
PSMC3-205	ENST00000528362	P3H3	Q8IVL6	736 aa		19.54	■□□□□ 0.72
PSMC3-205	ENST00000528362	KIF13A	Q9H1H9	1805 aa		19.53	■□□□□ 0.72
PSMC3-205	ENST00000528362	ABCA8	O94911	1581 aa		19.51	■□□□□ 0.71
PSMC3-205	ENST00000528362	SAMD9	Q5K651	1589 aa		19.5	■□□□□ 0.71
PSMC3-205	ENST00000528362	RANGAP1	P46060	587 aa	Predicted RBP	19.48	■□□□□ 0.71
PSMC3-205	ENST00000528362	EHMT2	Q96KQ7	1210 aa		19.47	■□□□□ 0.71
PSMC3-205	ENST00000528362	ZCCHC11	Q5TAX3	1644 aa	Known RBP	19.46	■□□□□ 0.71
PSMC3-205	ENST00000528362	AEBP2	Q6ZN18	517 aa	Predicted RBP	19.44	■□□□□ 0.7
PSMC3-205	ENST00000528362	FHOD3	Q2V2M9	1422 aa		19.43	■□□□□ 0.7
PSMC3-205	ENST00000528362	EPRS	P07814	1512 aa	Known RBP	19.43	■□□□□ 0.7
PSMC3-205	ENST00000528362	GLI2	P10070	1586 aa		19.42	■□□□□ 0.7
PSMC3-205	ENST00000528362	UBTF	P17480	764 aa	Known RBP	19.42	■□□□□ 0.7
PSMC3-205	ENST00000528362	WDR7	Q9Y4E6	1490 aa		19.41	■□□□□ 0.7
PSMC3-205	ENST00000528362	ARID3C	A6NKF2	412 aa		19.39	■□□□□ 0.69
PSMC3-205	ENST00000528362	EFCAB5	A4FU69	1503 aa		19.38	■□□□□ 0.69
PSMC3-205	ENST00000528362	ATP10B	O94823	1461 aa		19.37	■□□□□ 0.69
PSMC3-205	ENST00000528362	NUP153	P49790	1475 aa	Known RBP	19.34	■□□□□ 0.69
PSMC3-205	ENST00000528362	RAPGEF6	Q8TEU7	1601 aa		19.33	■□□□□ 0.69
PSMC3-205	ENST00000528362	KCNH8	Q96L42	1107 aa		19.31	■□□□□ 0.68
PSMC3-205	ENST00000528362	ARHGAP35	Q9NRY4	1499 aa		19.3	■□□□□ 0.68
PSMC3-205	ENST00000528362	PPRC1	Q5VV67	1664 aa	Known RBP	19.3	■□□□□ 0.68
PSMC3-205	ENST00000528362	MAP3K4	Q9Y6R4	1608 aa		19.29	■□□□□ 0.68
PSMC3-205	ENST00000528362	TSPOAP1	O95153	1857 aa		19.28	■□□□□ 0.68
PSMC3-205	ENST00000528362	KDM6B	O15054	1643 aa		19.27	■□□□□ 0.68
PSMC3-205	ENST00000528362	CD109	Q6YHK3	1445 aa		19.25	■□□□□ 0.67
PSMC3-205	ENST00000528362	TEX14	Q8IWB6	1497 aa		19.25	■□□□□ 0.67
PSMC3-205	ENST00000528362	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	19.24	■□□□□ 0.67
PSMC3-205	ENST00000528362	HNRNPUL2	Q1KMD3	747 aa	Known RBP	19.24	■□□□□ 0.67
PSMC3-205	ENST00000528362	COL17A1	Q9UMD9	1497 aa	Predicted RBP	19.22	■□□□□ 0.67
PSMC3-205	ENST00000528362	MAGI3	Q5TCQ9	1506 aa		19.22	■□□□□ 0.67
PSMC3-205	ENST00000528362	FMN1	Q68DA7	1419 aa		19.22	■□□□□ 0.67
PSMC3-205	ENST00000528362	CFAP43	Q8NDM7	1665 aa		19.17	■□□□□ 0.66
PSMC3-205	ENST00000528362	CDK13	Q14004	1512 aa	Known RBP	19.16	■□□□□ 0.66
PSMC3-205	ENST00000528362	PLEKHD1	A6NEE1	506 aa		19.16	■□□□□ 0.66
PSMC3-205	ENST00000528362	ABCA9	Q8IUA7	1624 aa		19.14	■□□□□ 0.66
PSMC3-205	ENST00000528362	ATP1B4	Q9UN42	357 aa	Predicted RBP	19.13	■□□□□ 0.65
PSMC3-205	ENST00000528362	CLIP1	P30622	1438 aa		19.12	■□□□□ 0.65
PSMC3-205	ENST00000528362	HECW1	Q76N89	1606 aa		19.11	■□□□□ 0.65
PSMC3-205	ENST00000528362	CASKIN1	Q8WXD9	1431 aa		19.07	■□□□□ 0.64
PSMC3-205	ENST00000528362	PHLDB1	Q86UU1	1377 aa		19.06	■□□□□ 0.64
PSMC3-205	ENST00000528362	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	19.05	■□□□□ 0.64	2e-6	■□□□□ 8.3
PSMC3-205	ENST00000528362	ARAP3	Q8WWN8	1544 aa		19.05	■□□□□ 0.64
PSMC3-205	ENST00000528362	PCF11	O94913	1555 aa	Known RBP	19.05	■□□□□ 0.64
PSMC3-205	ENST00000528362	NEO1	Q92859	1461 aa		19.04	■□□□□ 0.64
PSMC3-205	ENST00000528362	KDM4F	A0A1W2PPD8	638 aa		19.04	■□□□□ 0.64
PSMC3-205	ENST00000528362	CDK11A	Q9UQ88	783 aa	Predicted RBP	19.03	■□□□□ 0.64
PSMC3-205	ENST00000528362	TTC37	Q6PGP7	1564 aa		19.02	■□□□□ 0.64
PSMC3-205	ENST00000528362	TRO	Q12816	1431 aa	Predicted RBP	19.01	■□□□□ 0.63
PSMC3-205	ENST00000528362	CEP162	Q5TB80	1403 aa		19	■□□□□ 0.63
PSMC3-205	ENST00000528362	FYCO1	Q9BQS8	1478 aa		19	■□□□□ 0.63
PSMC3-205	ENST00000528362	CCDC18	Q5T9S5	1454 aa		18.99	■□□□□ 0.63
PSMC3-205	ENST00000528362	FANCA	O15360	1455 aa		18.98	■□□□□ 0.63
PSMC3-205	ENST00000528362	RAPGEF3	O95398	923 aa		18.98	■□□□□ 0.63
PSMC3-205	ENST00000528362	LOC105371045	A0A1W2PR82	267 aa		18.97	■□□□□ 0.63
PSMC3-205	ENST00000528362	PLCH2	O75038	1416 aa		18.96	■□□□□ 0.63
PSMC3-205	ENST00000528362	AKNA	Q7Z591	1439 aa		18.96	■□□□□ 0.63
PSMC3-205	ENST00000528362	LRRIQ1	Q96JM4	1722 aa		18.94	■□□□□ 0.62
PSMC3-205	ENST00000528362	KIF14	Q15058	1648 aa		18.94	■□□□□ 0.62
PSMC3-205	ENST00000528362	FRMPD1	Q5SYB0	1578 aa		18.93	■□□□□ 0.62
PSMC3-205	ENST00000528362	DENND4B	O75064	1496 aa	Predicted RBP	18.92	■□□□□ 0.62
PSMC3-205	ENST00000528362	ADGRL1	O94910	1474 aa		18.91	■□□□□ 0.62
PSMC3-205	ENST00000528362	CFAP74	Q9C0B2	1584 aa		18.89	■□□□□ 0.62
PSMC3-205	ENST00000528362	EFCAB2	Q5VUJ9	269 aa		18.88	■□□□□ 0.61
PSMC3-205	ENST00000528362	SCAPER	Q9BY12	1400 aa		18.86	■□□□□ 0.61
PSMC3-205	ENST00000528362	POGZ	Q7Z3K3	1410 aa		18.84	■□□□□ 0.61
PSMC3-205	ENST00000528362	ARHGAP5	Q13017	1502 aa		18.84	■□□□□ 0.61
PSMC3-205	ENST00000528362	ZMYM4	Q5VZL5	1548 aa		18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms