RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 CHMP7Q8WUX9 453 aaPredicted RBP20.34■□□□□ 0.85
RBM39-243ENST00000528062 FBLN2P98095 1184 aa20.34■□□□□ 0.85
RBM39-243ENST00000528062 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
RBM39-243ENST00000528062 NUP160Q12769 1436 aa20.31■□□□□ 0.84
RBM39-243ENST00000528062 CTTNBP2Q8WZ74 1663 aa20.29■□□□□ 0.84
RBM39-243ENST00000528062 CLASP1Q7Z460 1538 aa20.25■□□□□ 0.83
RBM39-243ENST00000528062 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
RBM39-243ENST00000528062 IQGAP2Q13576 1575 aa20.18■□□□□ 0.82
RBM39-243ENST00000528062 OSCARQ8IYS5 282 aa20.15■□□□□ 0.82
RBM39-243ENST00000528062 SHROOM2Q13796 1616 aa20.15■□□□□ 0.82
RBM39-243ENST00000528062 UBTFP17480 764 aaKnown RBP20.15■□□□□ 0.82
RBM39-243ENST00000528062 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
RBM39-243ENST00000528062 UGGT2Q9NYU1 1516 aa20.08■□□□□ 0.81
RBM39-243ENST00000528062 ERCC6L2Q5T890 1561 aa20.07■□□□□ 0.8
RBM39-243ENST00000528062 SAMD9Q5K651 1589 aa20.05■□□□□ 0.8
RBM39-243ENST00000528062 DISP1Q96F81 1524 aa20.04■□□□□ 0.8
RBM39-243ENST00000528062 JPH4Q96JJ6 628 aa20.04■□□□□ 0.8
RBM39-243ENST00000528062 KIAA0556O60303 1618 aa20.01■□□□□ 0.79
RBM39-243ENST00000528062 CEP162Q5TB80 1403 aa20.01■□□□□ 0.79
RBM39-243ENST00000528062 RANGAP1P46060 587 aaPredicted RBP20■□□□□ 0.79
RBM39-243ENST00000528062 ARHGAP35Q9NRY4 1499 aa20■□□□□ 0.79
RBM39-243ENST00000528062 PRG4Q92954 1404 aaPredicted RBP19.99■□□□□ 0.79
RBM39-243ENST00000528062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.97■□□□□ 0.79
RBM39-243ENST00000528062 EFCAB5A4FU69 1503 aa19.97■□□□□ 0.79
RBM39-243ENST00000528062 CLIP1P30622 1438 aa19.96■□□□□ 0.79
RBM39-243ENST00000528062 ARHGEF11O15085 1522 aa19.94■□□□□ 0.78
RBM39-243ENST00000528062 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
RBM39-243ENST00000528062 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
RBM39-243ENST00000528062 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
RBM39-243ENST00000528062 ARAP1Q96P48 1450 aa19.92■□□□□ 0.78
RBM39-243ENST00000528062 FHOD3Q2V2M9 1422 aa19.91■□□□□ 0.78
RBM39-243ENST00000528062 P3H3Q8IVL6 736 aa19.9■□□□□ 0.78
RBM39-243ENST00000528062 SCAF1Q9H7N4 1312 aaKnown RBP19.89■□□□□ 0.78
RBM39-243ENST00000528062 CARMIL2Q6F5E8 1435 aa19.89■□□□□ 0.77
RBM39-243ENST00000528062 CCER1Q8TC90 406 aaPredicted RBP19.87■□□□□ 0.77
RBM39-243ENST00000528062 TTBK1Q5TCY1 1321 aaPredicted RBP19.81■□□□□ 0.76
RBM39-243ENST00000528062 DNAJC5Q9H3Z4 198 aa19.8■□□□□ 0.76
RBM39-243ENST00000528062 PTPRGP23470 1445 aa19.78■□□□□ 0.76
RBM39-243ENST00000528062 PLB1Q6P1J6 1458 aa19.77■□□□□ 0.75
RBM39-243ENST00000528062 PCF11O94913 1555 aaKnown RBP19.76■□□□□ 0.75
RBM39-243ENST00000528062 ABCA8O94911 1581 aa19.76■□□□□ 0.75
RBM39-243ENST00000528062 LRRIQ1Q96JM4 1722 aa19.74■□□□□ 0.75
RBM39-243ENST00000528062 RAPGEF6Q8TEU7 1601 aa19.73■□□□□ 0.75
RBM39-243ENST00000528062 FMN1Q68DA7 1419 aa19.73■□□□□ 0.75
RBM39-243ENST00000528062 ADCY10Q96PN6 1610 aa19.72■□□□□ 0.75
RBM39-243ENST00000528062 VPS8Q8N3P4 1428 aa19.72■□□□□ 0.75
RBM39-243ENST00000528062 ABCC2Q92887 1545 aa19.68■□□□□ 0.74
RBM39-243ENST00000528062 UACAQ9BZF9 1416 aa19.68■□□□□ 0.74
RBM39-243ENST00000528062 NUP153P49790 1475 aaKnown RBP19.67■□□□□ 0.74
RBM39-243ENST00000528062 CASKIN1Q8WXD9 1431 aa19.67■□□□□ 0.74
RBM39-243ENST00000528062 CYB5RLQ6IPT4 315 aa19.66■□□□□ 0.74
RBM39-243ENST00000528062 UHRF1BP1LA0JNW5 1464 aa19.66■□□□□ 0.74
RBM39-243ENST00000528062 FYCO1Q9BQS8 1478 aa19.66■□□□□ 0.74
RBM39-243ENST00000528062 HECW1Q76N89 1606 aa19.65■□□□□ 0.74
RBM39-243ENST00000528062 DIEXFQ68CQ4 756 aaKnown RBP19.61■□□□□ 0.73
RBM39-243ENST00000528062 CDK13Q14004 1512 aaKnown RBP19.6■□□□□ 0.73
RBM39-243ENST00000528062 ZCCHC11Q5TAX3 1644 aaKnown RBP19.6■□□□□ 0.73
RBM39-243ENST00000528062 ACIN1Q9UKV3 1341 aaKnown RBP19.59■□□□□ 0.73
RBM39-243ENST00000528062 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
RBM39-243ENST00000528062 NEUROD1Q13562 356 aa19.59■□□□□ 0.73
RBM39-243ENST00000528062 KDM5BQ9UGL1 1544 aa19.58■□□□□ 0.73
RBM39-243ENST00000528062 ATP10BO94823 1461 aa19.57■□□□□ 0.72
RBM39-243ENST00000528062 CFAP43Q8NDM7 1665 aa19.57■□□□□ 0.72
RBM39-243ENST00000528062 ARID3CA6NKF2 412 aa19.56■□□□□ 0.72
RBM39-243ENST00000528062 PELP1Q8IZL8 1130 aaKnown RBP19.56■□□□□ 0.72
RBM39-243ENST00000528062 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
RBM39-243ENST00000528062 ATP1B4Q9UN42 357 aaPredicted RBP19.53■□□□□ 0.72
RBM39-243ENST00000528062 MAGI3Q5TCQ9 1506 aa19.52■□□□□ 0.72
RBM39-243ENST00000528062 CCDC18Q5T9S5 1454 aa19.51■□□□□ 0.71
RBM39-243ENST00000528062 MAP3K1Q13233 1512 aa19.48■□□□□ 0.71
RBM39-243ENST00000528062 MAPKBP1O60336 1514 aa19.45■□□□□ 0.7
RBM39-243ENST00000528062 KANK4Q5T7N3 995 aaPredicted RBP19.42■□□□□ 0.7
RBM39-243ENST00000528062 ASXL2Q76L83 1435 aa19.42■□□□□ 0.7
RBM39-243ENST00000528062 LRRC9Q6ZRR7 1453 aa19.41■□□□□ 0.7
RBM39-243ENST00000528062 ZNF316A6NFI3 1004 aaPredicted RBP19.41■□□□□ 0.7
RBM39-243ENST00000528062 KIF14Q15058 1648 aa19.4■□□□□ 0.7
RBM39-243ENST00000528062 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
RBM39-243ENST00000528062 WDR7Q9Y4E6 1490 aa19.39■□□□□ 0.7
RBM39-243ENST00000528062 EHBP1L1Q8N3D4 1523 aa19.38■□□□□ 0.69
RBM39-243ENST00000528062 CENPBP07199 599 aaPredicted RBP19.38■□□□□ 0.69
RBM39-243ENST00000528062 GTF3C3Q9Y5Q9 886 aa19.38■□□□□ 0.69
RBM39-243ENST00000528062 TROQ12816 1431 aaPredicted RBP19.37■□□□□ 0.69
RBM39-243ENST00000528062 NPM1P06748 294 aaKnown RBP eCLIP19.36■□□□□ 0.69
RBM39-243ENST00000528062 MTUS2Q5JR59 1369 aa19.33■□□□□ 0.69
RBM39-243ENST00000528062 KIF13AQ9H1H9 1805 aa19.33■□□□□ 0.68
RBM39-243ENST00000528062 DIP2BQ9P265 1576 aa19.33■□□□□ 0.68
RBM39-243ENST00000528062 PLEKHD1A6NEE1 506 aa19.32■□□□□ 0.68
RBM39-243ENST00000528062 TTC37Q6PGP7 1564 aa19.32■□□□□ 0.68
RBM39-243ENST00000528062 APLP2Q06481 763 aa19.32■□□□□ 0.68
RBM39-243ENST00000528062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.31■□□□□ 0.68
RBM39-243ENST00000528062 SUPT6HQ7KZ85 1726 aaKnown RBP19.31■□□□□ 0.68
RBM39-243ENST00000528062 CDK11AQ9UQ88 783 aaPredicted RBP19.3■□□□□ 0.68
RBM39-243ENST00000528062 ABCC10Q5T3U5 1492 aa19.29■□□□□ 0.68
RBM39-243ENST00000528062 ABCA9Q8IUA7 1624 aa19.29■□□□□ 0.68
RBM39-243ENST00000528062 NCOA2Q15596 1464 aa19.27■□□□□ 0.68
RBM39-243ENST00000528062 KCNH8Q96L42 1107 aa19.27■□□□□ 0.68
RBM39-243ENST00000528062 CDC42BPAQ5VT25 1732 aa19.26■□□□□ 0.67
RBM39-243ENST00000528062 GLI2P10070 1586 aa19.26■□□□□ 0.67
RBM39-243ENST00000528062 MAP3K4Q9Y6R4 1608 aa19.24■□□□□ 0.67
RBM39-243ENST00000528062 CDC42BPBQ9Y5S2 1711 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms