RNA–Protein interactions for RNA: ENST00000527891.5

ATM-213, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-213ENST00000527891 IGF1RP08069 1367 aa30.15■■■□□ 2.42
ATM-213ENST00000527891 CUL7Q14999 1698 aa30.11■■■□□ 2.41
ATM-213ENST00000527891 KIAA0586Q9BVV6 1533 aa30.07■■■□□ 2.4
ATM-213ENST00000527891 KIF13AQ9H1H9 1805 aa29.97■■■□□ 2.39
ATM-213ENST00000527891 CARMIL1Q5VZK9 1371 aa29.96■■■□□ 2.39
ATM-213ENST00000527891 NPM1P06748 294 aaKnown RBP eCLIP29.96■■■□□ 2.39
ATM-213ENST00000527891 ADCY10Q96PN6 1610 aa29.93■■■□□ 2.38
ATM-213ENST00000527891 MAPKBP1O60336 1514 aa29.91■■■□□ 2.38
ATM-213ENST00000527891 ABCC10Q5T3U5 1492 aa29.89■■■□□ 2.38
ATM-213ENST00000527891 AEBP2Q6ZN18 517 aaPredicted RBP29.88■■■□□ 2.37
ATM-213ENST00000527891 FAM69CQ0P6D2 419 aa29.85■■■□□ 2.37
ATM-213ENST00000527891 DIP2BQ9P265 1576 aa29.81■■■□□ 2.36
ATM-213ENST00000527891 PTPRGP23470 1445 aa29.8■■■□□ 2.36
ATM-213ENST00000527891 CARMIL2Q6F5E8 1435 aa29.79■■■□□ 2.36
ATM-213ENST00000527891 IQGAP2Q13576 1575 aa29.78■■■□□ 2.36
ATM-213ENST00000527891 TNIKQ9UKE5 1360 aa29.76■■■□□ 2.35
ATM-213ENST00000527891 TTBK1Q5TCY1 1321 aaPredicted RBP29.71■■■□□ 2.35
ATM-213ENST00000527891 RAPGEF2Q9Y4G8 1499 aa29.69■■■□□ 2.34
ATM-213ENST00000527891 ABCC2Q92887 1545 aa29.66■■■□□ 2.34
ATM-213ENST00000527891 DISP1Q96F81 1524 aa29.64■■■□□ 2.34
ATM-213ENST00000527891 UHRF1BP1LA0JNW5 1464 aa29.6■■■□□ 2.33
ATM-213ENST00000527891 UGGT2Q9NYU1 1516 aa29.6■■■□□ 2.33
ATM-213ENST00000527891 UACAQ9BZF9 1416 aa29.58■■■□□ 2.33
ATM-213ENST00000527891 KDM6BO15054 1643 aa29.56■■■□□ 2.32
ATM-213ENST00000527891 ASXL2Q76L83 1435 aa29.55■■■□□ 2.32
ATM-213ENST00000527891 PLB1Q6P1J6 1458 aa29.55■■■□□ 2.32
ATM-213ENST00000527891 TSPOAP1O95153 1857 aa29.54■■■□□ 2.32
ATM-213ENST00000527891 KIAA0556O60303 1618 aa29.52■■■□□ 2.32
ATM-213ENST00000527891 GLI2P10070 1586 aa29.47■■■□□ 2.31
ATM-213ENST00000527891 KDM5BQ9UGL1 1544 aa29.46■■■□□ 2.31
ATM-213ENST00000527891 CTTNBP2Q8WZ74 1663 aa29.43■■■□□ 2.3
ATM-213ENST00000527891 ZCCHC11Q5TAX3 1644 aaKnown RBP29.38■■■□□ 2.29
ATM-213ENST00000527891 PPRC1Q5VV67 1664 aaKnown RBP29.37■■■□□ 2.29
ATM-213ENST00000527891 PRXQ9BXM0 1461 aa29.37■■■□□ 2.29
ATM-213ENST00000527891 EPRSP07814 1512 aaKnown RBP29.37■■■□□ 2.29
ATM-213ENST00000527891 GOLGA3Q08378 1498 aa29.36■■■□□ 2.29
ATM-213ENST00000527891 MAP3K4Q9Y6R4 1608 aa29.31■■■□□ 2.28
ATM-213ENST00000527891 KDM4FA0A1W2PPD8 638 aa29.27■■■□□ 2.28
ATM-213ENST00000527891 WDR7Q9Y4E6 1490 aa29.27■■■□□ 2.28
ATM-213ENST00000527891 TEX14Q8IWB6 1497 aa29.25■■■□□ 2.27
ATM-213ENST00000527891 ABCA8O94911 1581 aa29.24■■■□□ 2.27
ATM-213ENST00000527891 COL17A1Q9UMD9 1497 aaPredicted RBP29.19■■■□□ 2.26
ATM-213ENST00000527891 CSRNP3Q8WYN3 585 aa29.13■■■□□ 2.25
ATM-213ENST00000527891 FAM9AQ8IZU1 332 aaPredicted RBP29.09■■■□□ 2.25
ATM-213ENST00000527891 CD109Q6YHK3 1445 aa29.09■■■□□ 2.25
ATM-213ENST00000527891 KCNH8Q96L42 1107 aa29.08■■■□□ 2.25
ATM-213ENST00000527891 CFAP43Q8NDM7 1665 aa29.08■■■□□ 2.25
ATM-213ENST00000527891 MAGI3Q5TCQ9 1506 aa29.07■■■□□ 2.24
ATM-213ENST00000527891 P3H3Q8IVL6 736 aa29.07■■■□□ 2.24
ATM-213ENST00000527891 ADGRL1O94910 1474 aa29.04■■■□□ 2.24
ATM-213ENST00000527891 EEA1Q15075 1411 aa29.03■■■□□ 2.24
ATM-213ENST00000527891 SAMD9Q5K651 1589 aa29.02■■■□□ 2.24
ATM-213ENST00000527891 ATP10BO94823 1461 aa28.99■■■□□ 2.23
ATM-213ENST00000527891 ARID3CA6NKF2 412 aa28.99■■■□□ 2.23
ATM-213ENST00000527891 RAPGEF6Q8TEU7 1601 aa28.91■■■□□ 2.22
ATM-213ENST00000527891 ABCA9Q8IUA7 1624 aa28.86■■■□□ 2.21
ATM-213ENST00000527891 RANGAP1P46060 587 aaPredicted RBP28.84■■■□□ 2.21
ATM-213ENST00000527891 ARAP3Q8WWN8 1544 aa28.84■■■□□ 2.21
ATM-213ENST00000527891 FHOD3Q2V2M9 1422 aa28.83■■■□□ 2.21
ATM-213ENST00000527891 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.82■■■□□ 2.2
ATM-213ENST00000527891 HNRNPUL2Q1KMD3 747 aaKnown RBP28.82■■■□□ 2.2
ATM-213ENST00000527891 NUP153P49790 1475 aaKnown RBP28.82■■■□□ 2.2
ATM-213ENST00000527891 PHLDB1Q86UU1 1377 aa28.79■■■□□ 2.2
ATM-213ENST00000527891 KIF21BO75037 1637 aa28.78■■■□□ 2.2
ATM-213ENST00000527891 EFCAB5A4FU69 1503 aa28.74■■■□□ 2.19
ATM-213ENST00000527891 NEO1Q92859 1461 aa28.72■■■□□ 2.19
ATM-213ENST00000527891 PLEKHD1A6NEE1 506 aa28.67■■■□□ 2.18
ATM-213ENST00000527891 RAPGEF3O95398 923 aa28.65■■■□□ 2.18
ATM-213ENST00000527891 HECW2Q9P2P5 1572 aa28.65■■■□□ 2.18
ATM-213ENST00000527891 FRMPD1Q5SYB0 1578 aa28.59■■■□□ 2.17
ATM-213ENST00000527891 UBTFP17480 764 aaKnown RBP28.56■■■□□ 2.16
ATM-213ENST00000527891 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.56■■■□□ 2.16
ATM-213ENST00000527891 EHMT2Q96KQ7 1210 aa28.54■■■□□ 2.16
ATM-213ENST00000527891 CHIC1Q5VXU3 224 aa28.53■■■□□ 2.16
ATM-213ENST00000527891 CFAP74Q9C0B2 1584 aa28.53■■■□□ 2.16
ATM-213ENST00000527891 CDK13Q14004 1512 aaKnown RBP28.53■■■□□ 2.16
ATM-213ENST00000527891 FANCAO15360 1455 aa28.53■■■□□ 2.16
ATM-213ENST00000527891 DENND4BO75064 1496 aaPredicted RBP28.53■■■□□ 2.16
ATM-213ENST00000527891 AKNAQ7Z591 1439 aa28.52■■■□□ 2.16
ATM-213ENST00000527891 TTC37Q6PGP7 1564 aa28.51■■■□□ 2.15
ATM-213ENST00000527891 ADAMTSL3P82987 1691 aa28.49■■■□□ 2.15
ATM-213ENST00000527891 FMN1Q68DA7 1419 aa28.49■■■□□ 2.15
ATM-213ENST00000527891 ARHGAP35Q9NRY4 1499 aa28.46■■■□□ 2.15
ATM-213ENST00000527891 RICTORQ6R327 1708 aa28.46■■■□□ 2.15
ATM-213ENST00000527891 ARHGEF40Q8TER5 1519 aa28.46■■■□□ 2.15
ATM-213ENST00000527891 PTPRMP28827 1452 aa28.46■■■□□ 2.15
ATM-213ENST00000527891 HECW1Q76N89 1606 aa28.45■■■□□ 2.14
ATM-213ENST00000527891 ARID4BQ4LE39 1312 aaPredicted RBP28.44■■■□□ 2.14
ATM-213ENST00000527891 BCORL1Q5H9F3 1711 aa28.43■■■□□ 2.14
ATM-213ENST00000527891 ATP1B4Q9UN42 357 aaPredicted RBP28.42■■■□□ 2.14
ATM-213ENST00000527891 ILDR1Q86SU0 546 aaPredicted RBP28.4■■■□□ 2.14
ATM-213ENST00000527891 ZMYM4Q5VZL5 1548 aa28.39■■■□□ 2.14
ATM-213ENST00000527891 PLCH2O75038 1416 aa28.39■■■□□ 2.14
ATM-213ENST00000527891 MADDQ8WXG6 1647 aa28.38■■■□□ 2.13
ATM-213ENST00000527891 CDK11AQ9UQ88 783 aaPredicted RBP28.36■■■□□ 2.13
ATM-213ENST00000527891 ZFYVE16Q7Z3T8 1539 aa28.34■■■□□ 2.13
ATM-213ENST00000527891 MAGI2Q86UL8 1455 aa28.34■■■□□ 2.13
ATM-213ENST00000527891 SCAPERQ9BY12 1400 aa28.33■■■□□ 2.13
ATM-213ENST00000527891 YEATS2Q9ULM3 1422 aa28.32■■■□□ 2.12
ATM-213ENST00000527891 POGZQ7Z3K3 1410 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms