RNA–Protein interactions for RNA: ENST00000527192.5

CSF1-209, Transcript of colony stimulating factor 1, humanhuman

TSL 4

Gene CSF1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-209ENST00000527192 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
CSF1-209ENST00000527192 CEP170Q5SW79 1584 aa13.13□□□□□ -0.31
CSF1-209ENST00000527192 TDRD9Q8NDG6 1382 aaKnown RBP13.13□□□□□ -0.31
CSF1-209ENST00000527192 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
CSF1-209ENST00000527192 WRNQ14191 1432 aaPredicted RBP eCLIP13.1□□□□□ -0.31
CSF1-209ENST00000527192 GRIN2BQ13224 1484 aa13.1□□□□□ -0.31
CSF1-209ENST00000527192 PPRC1Q5VV67 1664 aaKnown RBP13.06□□□□□ -0.32
CSF1-209ENST00000527192 NPM1P06748 294 aaKnown RBP eCLIP13.06□□□□□ -0.32
CSF1-209ENST00000527192 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
CSF1-209ENST00000527192 PCF11O94913 1555 aaKnown RBP13.05□□□□□ -0.32
CSF1-209ENST00000527192 BIVM-ERCC5R4GMW8 1640 aa13.04□□□□□ -0.32
CSF1-209ENST00000527192 COL17A1Q9UMD9 1497 aaPredicted RBP13.02□□□□□ -0.33
CSF1-209ENST00000527192 ABCA5Q8WWZ7 1642 aa13□□□□□ -0.33
CSF1-209ENST00000527192 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
CSF1-209ENST00000527192 ADCY10Q96PN6 1610 aa12.97□□□□□ -0.33
CSF1-209ENST00000527192 PTPRMP28827 1452 aa12.95□□□□□ -0.34
CSF1-209ENST00000527192 ERICH3Q5RHP9 1530 aa12.94□□□□□ -0.34
CSF1-209ENST00000527192 FHAD1B1AJZ9 1412 aa12.93□□□□□ -0.34
CSF1-209ENST00000527192 GRIN2AQ12879 1464 aa12.91□□□□□ -0.34
CSF1-209ENST00000527192 NUP160Q12769 1436 aa12.9□□□□□ -0.34
CSF1-209ENST00000527192 KIF21BO75037 1637 aa12.88□□□□□ -0.35
CSF1-209ENST00000527192 GLI2P10070 1586 aa12.88□□□□□ -0.35
CSF1-209ENST00000527192 ADAMTS12P58397 1594 aa12.88□□□□□ -0.35
CSF1-209ENST00000527192 PRG4Q92954 1404 aaPredicted RBP12.87□□□□□ -0.35
CSF1-209ENST00000527192 ADAMTSL3P82987 1691 aa12.86□□□□□ -0.35
CSF1-209ENST00000527192 KIF27Q86VH2 1401 aa12.86□□□□□ -0.35
CSF1-209ENST00000527192 HSPA2P54652 639 aa12.85□□□□□ -0.35
CSF1-209ENST00000527192 IGF1RP08069 1367 aa12.83□□□□□ -0.36
CSF1-209ENST00000527192 MED1Q15648 1581 aaPredicted RBP12.81□□□□□ -0.36
CSF1-209ENST00000527192 TEX14Q8IWB6 1497 aa12.79□□□□□ -0.36
CSF1-209ENST00000527192 MAP3K4Q9Y6R4 1608 aa12.79□□□□□ -0.36
CSF1-209ENST00000527192 JPH4Q96JJ6 628 aa12.76□□□□□ -0.37
CSF1-209ENST00000527192 CUL7Q14999 1698 aa12.75□□□□□ -0.37
CSF1-209ENST00000527192 CARMIL1Q5VZK9 1371 aa12.74□□□□□ -0.37
CSF1-209ENST00000527192 KIAA0586Q9BVV6 1533 aa12.73□□□□□ -0.37
CSF1-209ENST00000527192 PLB1Q6P1J6 1458 aa12.72□□□□□ -0.37
CSF1-209ENST00000527192 MADDQ8WXG6 1647 aa12.72□□□□□ -0.37
CSF1-209ENST00000527192 IQSEC2Q5JU85 1478 aa12.71□□□□□ -0.38
CSF1-209ENST00000527192 ASXL2Q76L83 1435 aa12.71□□□□□ -0.38
CSF1-209ENST00000527192 RUSC2Q8N2Y8 1516 aa12.69□□□□□ -0.38
CSF1-209ENST00000527192 BCORL1Q5H9F3 1711 aa12.68□□□□□ -0.38
CSF1-209ENST00000527192 RIMS1Q86UR5 1692 aaKnown RBP12.65□□□□□ -0.38
CSF1-209ENST00000527192 STRCQ7RTU9 1775 aa12.64□□□□□ -0.39
CSF1-209ENST00000527192 EPRSP07814 1512 aaKnown RBP12.63□□□□□ -0.39
CSF1-209ENST00000527192 PHF23Q9BUL5 403 aaPredicted RBP12.63□□□□□ -0.39
CSF1-209ENST00000527192 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
CSF1-209ENST00000527192 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
CSF1-209ENST00000527192 ABCC2Q92887 1545 aa12.62□□□□□ -0.39
CSF1-209ENST00000527192 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
CSF1-209ENST00000527192 CARMIL2Q6F5E8 1435 aa12.6□□□□□ -0.39
CSF1-209ENST00000527192 YEATS2Q9ULM3 1422 aa12.6□□□□□ -0.39
CSF1-209ENST00000527192 IQGAP2Q13576 1575 aa12.57□□□□□ -0.4
CSF1-209ENST00000527192 PRXQ9BXM0 1461 aa12.57□□□□□ -0.4
CSF1-209ENST00000527192 TNIKQ9UKE5 1360 aa12.56□□□□□ -0.4
CSF1-209ENST00000527192 PTPRGP23470 1445 aa12.56□□□□□ -0.4
CSF1-209ENST00000527192 CFAP43Q8NDM7 1665 aa12.56□□□□□ -0.4
CSF1-209ENST00000527192 UGGT2Q9NYU1 1516 aa12.55□□□□□ -0.4
CSF1-209ENST00000527192 SRCAPQ6ZRS2 3230 aa12.54□□□□□ -0.4
CSF1-209ENST00000527192 EEA1Q15075 1411 aa12.54□□□□□ -0.4
CSF1-209ENST00000527192 UBAP1LF5GYI3 381 aa12.53□□□□□ -0.4
CSF1-209ENST00000527192 DISP1Q96F81 1524 aa12.52□□□□□ -0.41
CSF1-209ENST00000527192 PREX1Q8TCU6 1659 aa12.51□□□□□ -0.41
CSF1-209ENST00000527192 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
CSF1-209ENST00000527192 PTPRTO14522 1441 aa12.51□□□□□ -0.41
CSF1-209ENST00000527192 UHRF1BP1LA0JNW5 1464 aa12.51□□□□□ -0.41
CSF1-209ENST00000527192 PLPPR3Q6T4P5 718 aa12.5□□□□□ -0.41
CSF1-209ENST00000527192 MAGI3Q5TCQ9 1506 aa12.5□□□□□ -0.41
CSF1-209ENST00000527192 HSPA1LP34931 641 aa12.49□□□□□ -0.41
CSF1-209ENST00000527192 GOLGA3Q08378 1498 aa12.47□□□□□ -0.41
CSF1-209ENST00000527192 UACAQ9BZF9 1416 aa12.47□□□□□ -0.41
CSF1-209ENST00000527192 ARID4BQ4LE39 1312 aaPredicted RBP12.47□□□□□ -0.41
CSF1-209ENST00000527192 ARAP3Q8WWN8 1544 aa12.45□□□□□ -0.42
CSF1-209ENST00000527192 KIAA0556O60303 1618 aa12.44□□□□□ -0.42
CSF1-209ENST00000527192 CD109Q6YHK3 1445 aa12.43□□□□□ -0.42
CSF1-209ENST00000527192 KDM5BQ9UGL1 1544 aa12.42□□□□□ -0.42
CSF1-209ENST00000527192 FAM9AQ8IZU1 332 aaPredicted RBP12.42□□□□□ -0.42
CSF1-209ENST00000527192 CTTNBP2Q8WZ74 1663 aa12.42□□□□□ -0.42
CSF1-209ENST00000527192 ZCCHC11Q5TAX3 1644 aaKnown RBP12.4□□□□□ -0.42
CSF1-209ENST00000527192 RGS17Q9UGC6 210 aaPredicted RBP12.4□□□□□ -0.42
CSF1-209ENST00000527192 CHIC1Q5VXU3 224 aa12.39□□□□□ -0.43
CSF1-209ENST00000527192 TTC37Q6PGP7 1564 aa12.39□□□□□ -0.43
CSF1-209ENST00000527192 TTBK1Q5TCY1 1321 aaPredicted RBP12.37□□□□□ -0.43
CSF1-209ENST00000527192 SETD1AO15047 1707 aaKnown RBP12.37□□□□□ -0.43
CSF1-209ENST00000527192 IFFO2Q5TF58 517 aa12.37□□□□□ -0.43
CSF1-209ENST00000527192 FER1L4A9Z1Z3 1794 aa12.37□□□□□ -0.43
CSF1-209ENST00000527192 WDR7Q9Y4E6 1490 aa12.36□□□□□ -0.43
CSF1-209ENST00000527192 ABCA8O94911 1581 aa12.35□□□□□ -0.43
CSF1-209ENST00000527192 SCAF1Q9H7N4 1312 aaKnown RBP12.34□□□□□ -0.43
CSF1-209ENST00000527192 SETD1BQ9UPS6 1966 aaKnown RBP12.32□□□□□ -0.44
CSF1-209ENST00000527192 SAMD9Q5K651 1589 aa12.32□□□□□ -0.44
CSF1-209ENST00000527192 POGZQ7Z3K3 1410 aa12.3□□□□□ -0.44
CSF1-209ENST00000527192 PIP4K2BP78356 416 aa12.3□□□□□ -0.44
CSF1-209ENST00000527192 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
CSF1-209ENST00000527192 UHRF1BP1Q6BDS2 1440 aa12.29□□□□□ -0.44
CSF1-209ENST00000527192 FRMPD1Q5SYB0 1578 aa12.28□□□□□ -0.44
CSF1-209ENST00000527192 RAPGEF3O95398 923 aa12.28□□□□□ -0.44
CSF1-209ENST00000527192 EFCAB5A4FU69 1503 aa12.27□□□□□ -0.44
CSF1-209ENST00000527192 POTEAQ6S8J7 498 aa12.27□□□□□ -0.45
CSF1-209ENST00000527192 ZNF335Q9H4Z2 1342 aaPredicted RBP12.27□□□□□ -0.45
CSF1-209ENST00000527192 SIGLEC1Q9BZZ2 1709 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms