RNA–Protein interactions for RNA: ENST00000527192.5

CSF1-209, Transcript of colony stimulating factor 1, humanhuman

TSL 4

Gene CSF1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1-209ENST00000527192 NISCHQ9Y2I1 1504 aa18.31■□□□□ 0.52
CSF1-209ENST00000527192 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
CSF1-209ENST00000527192 ABCC9O60706 1549 aa17.47■□□□□ 0.39
CSF1-209ENST00000527192 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
CSF1-209ENST00000527192 CCDC180Q9P1Z9 1646 aa16.33■□□□□ 0.2
CSF1-209ENST00000527192 RB1CC1Q8TDY2 1594 aa16.05■□□□□ 0.16
CSF1-209ENST00000527192 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
CSF1-209ENST00000527192 CECR2Q9BXF3 1484 aa15.9■□□□□ 0.14
CSF1-209ENST00000527192 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
CSF1-209ENST00000527192 UNC13AQ9UPW8 1703 aa15.78■□□□□ 0.12
CSF1-209ENST00000527192 CC2D2AQ9P2K1 1620 aa15.76■□□□□ 0.11
CSF1-209ENST00000527192 BICRAQ9NZM4 1560 aa15.66■□□□□ 0.1
CSF1-209ENST00000527192 CUX2O14529 1486 aa15.66■□□□□ 0.1
CSF1-209ENST00000527192 NACADO15069 1562 aa15.6■□□□□ 0.09
CSF1-209ENST00000527192 MYO15BQ96JP2 1530 aa15.38■□□□□ 0.05
CSF1-209ENST00000527192 EIF4G1Q04637 1599 aaKnown RBP15.36■□□□□ 0.05
CSF1-209ENST00000527192 AEBP2Q6ZN18 517 aaPredicted RBP15.32■□□□□ 0.04
CSF1-209ENST00000527192 SHROOM4Q9ULL8 1493 aa15.29■□□□□ 0.04
CSF1-209ENST00000527192 DCAF8L2P0C7V8 631 aa15.27■□□□□ 0.04
CSF1-209ENST00000527192 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
CSF1-209ENST00000527192 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
CSF1-209ENST00000527192 ERCC6Q03468 1493 aa15.18■□□□□ 0.02
CSF1-209ENST00000527192 ILDR1Q86SU0 546 aaPredicted RBP15□□□□□ -0.01
CSF1-209ENST00000527192 THOC2Q8NI27 1593 aaKnown RBP14.81□□□□□ -0.04
CSF1-209ENST00000527192 SCRIBQ14160 1630 aa14.78□□□□□ -0.04
CSF1-209ENST00000527192 RIMBP3CA6NJZ7 1639 aa14.71□□□□□ -0.05
CSF1-209ENST00000527192 RIMBP3BA6NNM3 1639 aa14.71□□□□□ -0.05
CSF1-209ENST00000527192 RIMBP3Q9UFD9 1639 aa14.71□□□□□ -0.05
CSF1-209ENST00000527192 TRHP20396 242 aaPredicted RBP14.7□□□□□ -0.06
CSF1-209ENST00000527192 BAZ1AQ9NRL2 1556 aaPredicted RBP14.69□□□□□ -0.06
CSF1-209ENST00000527192 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
CSF1-209ENST00000527192 NESP48681 1621 aa14.63□□□□□ -0.07
CSF1-209ENST00000527192 SMARCA2P51531 1590 aa14.52□□□□□ -0.08
CSF1-209ENST00000527192 ARHGEF11O15085 1522 aa14.49□□□□□ -0.09
CSF1-209ENST00000527192 KIF21AQ7Z4S6 1674 aa14.46□□□□□ -0.1
CSF1-209ENST00000527192 CYB5RLQ6IPT4 315 aa14.41□□□□□ -0.1
CSF1-209ENST00000527192 NCAPD3P42695 1498 aa14.4□□□□□ -0.1
CSF1-209ENST00000527192 LAMC3Q9Y6N6 1575 aa14.32□□□□□ -0.12
CSF1-209ENST00000527192 WDR62O43379 1518 aa14.26□□□□□ -0.13
CSF1-209ENST00000527192 ARAP1Q96P48 1450 aa14.25□□□□□ -0.13
CSF1-209ENST00000527192 PDS5BQ9NTI5 1447 aa14.24□□□□□ -0.13
CSF1-209ENST00000527192 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
CSF1-209ENST00000527192 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
CSF1-209ENST00000527192 SMARCA4P51532 1647 aa14.19□□□□□ -0.14
CSF1-209ENST00000527192 HMGXB3Q12766 1538 aa14.18□□□□□ -0.14
CSF1-209ENST00000527192 LMTK3Q96Q04 1460 aa14.15□□□□□ -0.14
CSF1-209ENST00000527192 PEG3Q9GZU2 1588 aa14.14□□□□□ -0.15
CSF1-209ENST00000527192 SOCS7O14512 581 aa14.11□□□□□ -0.15
CSF1-209ENST00000527192 FBXO41Q8TF61 875 aa14.06□□□□□ -0.16
CSF1-209ENST00000527192 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
CSF1-209ENST00000527192 MROH2BQ7Z745 1585 aa14.05□□□□□ -0.16
CSF1-209ENST00000527192 ERCC6L2Q5T890 1561 aa14.02□□□□□ -0.16
CSF1-209ENST00000527192 KDM4FA0A1W2PPD8 638 aa14□□□□□ -0.17
CSF1-209ENST00000527192 RSF1Q96T23 1441 aaPredicted RBP13.96□□□□□ -0.18
CSF1-209ENST00000527192 ILDR2Q71H61 639 aa13.94□□□□□ -0.18
CSF1-209ENST00000527192 CEP164Q9UPV0 1460 aa13.88□□□□□ -0.19
CSF1-209ENST00000527192 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
CSF1-209ENST00000527192 HECW2Q9P2P5 1572 aa13.87□□□□□ -0.19
CSF1-209ENST00000527192 CHD1O14646 1710 aa13.86□□□□□ -0.19
CSF1-209ENST00000527192 WIZO95785 1651 aa13.84□□□□□ -0.19
CSF1-209ENST00000527192 ZNF608Q9ULD9 1512 aaPredicted RBP13.77□□□□□ -0.21
CSF1-209ENST00000527192 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
CSF1-209ENST00000527192 DISP3Q9P2K9 1392 aa13.74□□□□□ -0.21
CSF1-209ENST00000527192 KIF13AQ9H1H9 1805 aa13.73□□□□□ -0.21
CSF1-209ENST00000527192 FANCD2Q9BXW9 1451 aa13.73□□□□□ -0.21
CSF1-209ENST00000527192 URB2Q14146 1524 aaKnown RBP13.72□□□□□ -0.21
CSF1-209ENST00000527192 CFTRP13569 1480 aa13.72□□□□□ -0.21
CSF1-209ENST00000527192 SYNJ2O15056 1496 aa13.66□□□□□ -0.22
CSF1-209ENST00000527192 EIF4G3O43432 1585 aaKnown RBP13.66□□□□□ -0.22
CSF1-209ENST00000527192 IFT140Q96RY7 1462 aa13.65□□□□□ -0.22
CSF1-209ENST00000527192 CLASP1Q7Z460 1538 aa13.64□□□□□ -0.23
CSF1-209ENST00000527192 FBLN2P98095 1184 aa13.61□□□□□ -0.23
CSF1-209ENST00000527192 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
CSF1-209ENST00000527192 ADGRL1O94910 1474 aa13.57□□□□□ -0.24
CSF1-209ENST00000527192 GAPVD1Q14C86 1478 aa13.57□□□□□ -0.24
CSF1-209ENST00000527192 KDM6BO15054 1643 aa13.57□□□□□ -0.24
CSF1-209ENST00000527192 SPATA31D1Q6ZQQ2 1576 aa13.52□□□□□ -0.25
CSF1-209ENST00000527192 SYNJ1O43426 1573 aa13.48□□□□□ -0.25
CSF1-209ENST00000527192 PRDM2Q13029 1718 aa13.47□□□□□ -0.25
CSF1-209ENST00000527192 ABCC8Q09428 1581 aa13.46□□□□□ -0.25
CSF1-209ENST00000527192 AQRO60306 1485 aaKnown RBP eCLIP13.46□□□□□ -0.254e-6■■■■□ 26.2
CSF1-209ENST00000527192 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
CSF1-209ENST00000527192 FAM69CQ0P6D2 419 aa13.37□□□□□ -0.27
CSF1-209ENST00000527192 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
CSF1-209ENST00000527192 TARBP1Q13395 1621 aaKnown RBP13.35□□□□□ -0.27
CSF1-209ENST00000527192 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
CSF1-209ENST00000527192 TSPOAP1O95153 1857 aa13.33□□□□□ -0.28
CSF1-209ENST00000527192 SUPT5HO00267 1087 aaKnown RBP13.32□□□□□ -0.28
CSF1-209ENST00000527192 DIP2BQ9P265 1576 aa13.31□□□□□ -0.28
CSF1-209ENST00000527192 CHMP7Q8WUX9 453 aaPredicted RBP13.29□□□□□ -0.28
CSF1-209ENST00000527192 SNAPC4Q5SXM2 1469 aa13.28□□□□□ -0.28
CSF1-209ENST00000527192 POLA1P09884 1462 aaPredicted RBP13.26□□□□□ -0.29
CSF1-209ENST00000527192 CERKQ8TCT0 537 aa13.23□□□□□ -0.29
CSF1-209ENST00000527192 SOGA1O94964 1423 aa13.22□□□□□ -0.29
CSF1-209ENST00000527192 TOP2BQ02880 1626 aa13.21□□□□□ -0.29
CSF1-209ENST00000527192 MAPKBP1O60336 1514 aa13.21□□□□□ -0.29
CSF1-209ENST00000527192 WDR97A6NE52 1622 aa13.21□□□□□ -0.3
CSF1-209ENST00000527192 MAGI1Q96QZ7 1491 aaPredicted RBP13.2□□□□□ -0.3
CSF1-209ENST00000527192 CUX1P39880 1505 aa13.19□□□□□ -0.3
CSF1-209ENST00000527192 FGD5Q6ZNL6 1462 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms